🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Lotus Lofgren

Duke University

ORCID: 0000-0002-0632-102X

Also affiliated with University of California, Berkeley

Agricultural and Biological SciencesBiochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 12 papers. Top paper: “Transcriptional acclimation and spatial differentiation characterize drought response by the ectomycorrhizal fungus Suillus pungens”.

Transcriptional acclimation and spatial differentiation characterize drought response by the ectomycorrhizal fungus Suillus pungens

New Phytologist(2021)10.1111/nph.17816

N/A

0.679DataRank · unranked

12 citations

Rogério Margis, Andrea Ramirez, Nhu Nguyen, Lotus Lofgren, Hui‐ling Liao +4 more

Aspergillus fumigatus In-Host HOG Pathway Mutation for Cystic Fibrosis Lung Microenvironment Persistence

mBio(2021)10.1128/mbio.02153-21

N/A

0DataRank · unranked

36 citations

Lotus Lofgren, Alix Ashare, Jason Stajich, Robert A. Cramer, Brandon S. Ross

Aspergillus fumigatus Strain-Specific Conidia Lung Persistence Causes an Allergic Broncho-Pulmonary Aspergillosis-Like Disease Phenotype

mSphere(2021)10.1128/msphere.01250-20

N/A

0DataRank · unranked

18 citations

Ko-Wei Liu, Xi Wang, Caitlin H. Kowalski, Brandon S. Ross, K. Mills +7 more

Combined Pan-, Population-, and Phylo-Genomic Analysis of Aspergillus fumigatus Reveals Population Structure and Lineage-Specific Diversity

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.12.472145

N/A

0DataRank · unranked

8 citations

Brandon S. Ross, Robert A. Cramer, Jason Stajich, Lotus Lofgren

Host lung environment limits Aspergillus fumigatus germination through a SskA-dependent signaling response

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.08.27.456493

N/A

0DataRank · unranked

0 citations

McKenzie Stannard, Caitlin H. Kowalski, Dallas L. Mould, Alayna K. Caffrey-Carr, Rachel M. Temple +6 more

The pan-genome of Aspergillus fumigatus provides a high-resolution view of its population structure revealing high levels of lineage-specific diversity driven by recombination

PLoS Biology(2022)10.1371/journal.pbio.3001890

N/A

0DataRank · unranked

80 citations

Brandon S. Ross, Robert A. Cramer, Jason Stajich, Lotus Lofgren

Avian-associated Aspergillus fumigatus displays broad phylogenetic distribution, no evidence for host specificity, and multiple genotypes within epizootic events

G3 Genes Genomes Genetics(2022)10.1093/g3journal/jkac075

N/A

0DataRank · unranked

12 citations

Jeffrey M. Lorch, Robert A. Cramer, David S. Blehert, Brenda M. Berlowski-Zier, Megan E. Winzeler +4 more

Decoding the chemical language of Suillus fungi: genome mining and untargeted metabolomics uncover terpene chemical diversity

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.20.567897

N/A

0DataRank · unranked

2 citations

Lotus Lofgren, Manasa R. Appidi, Rytas Vilgalys, Robert L. Hettich, Paul E. Abraham +1 more

Suillus: an emerging model for the study of ectomycorrhizal ecology and evolution

New Phytologist(2024)10.1111/nph.19700

N/A

0DataRank · unranked

40 citations

Nhu Nguyen, Peter G. Kennedy, Eduardo Pérez‐Pazos, Jessica Fletcher, Hui‐ling Liao +11 more

The power of citizen science to advance fungal conservation

Conservation Letters(2024)10.1111/conl.13013

N/A

0DataRank · unranked

33 citations

C. Alisha Quandt, Lachlan Bartrop, Jonathan Cazabonne, Martha E. Crockatt, Susana P. Cunha +15 more

Comparative genomics reveals dynamic genome evolution in host specialist ectomycorrhizal fungi

New Phytologist(2020)10.1111/nph.17160

N/A

0DataRank · unranked

82 citations

Nhu Nguyen, Rytas Vilgalys, Joske Ruytinx, Hui‐ling Liao, Sara Branco +13 more

Decoding the chemical language of Suillus fungi: genome mining and untargeted metabolomics uncover terpene chemical diversity

mSystems(2024)10.1128/msystems.01225-23

N/A

0DataRank · unranked

17 citations

Lotus Lofgren, Manasa R. Appidi, Rytas Vilgalys, Robert L. Hettich, Paul E. Abraham +1 more