🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Roberto Bonasio

University of Pennsylvania

ORCID: 0000-0002-0767-0889
Biochemistry, Genetics and Molecular BiologyNeuroscience

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 3%percentile
1.2Author DataRank

Indexed papers

2in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Genome annotation with long RNA reads reveals new patterns of gene expression and improves single-cell analyses in an ant brain

BMC Biology(2021)10.1186/s12915-021-01188-w
Top 21%
0.940DataRank
Top 21%25 citations

Masato Sorida, Lihong Sheng, Bogdan Sieriebriennikov, Long Ding, Roberto Bonasio +1 more

Papers

Driven by 24 papers — median percentile 60. Top paper: “SAVER: gene expression recovery for single-cell RNA sequencing”.

SAVER: gene expression recovery for single-cell RNA sequencing

Nature Methods(2018)10.1038/s41592-018-0033-z
N/A
1.0DataRank · unranked
851 citations

Jingshu Wang, Eduardo Torre, Hannah Dueck, Sydney Shaffer, Roberto Bonasio +7 more

Genome annotation with long RNA reads reveals new patterns of gene expression and improves single-cell analyses in an ant brain

BMC Biology(2021)10.1186/s12915-021-01188-w
Top 21%
0.940DataRank
Top 21%25 citations

Masato Sorida, Lihong Sheng, Bogdan Sieriebriennikov, Long Ding, Roberto Bonasio +1 more

Genome annotation with long RNA reads reveals new patterns of gene expression in an ant brain

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.20.440671
Top 59%
0.259DataRank
Top 59%3 citations

Masato Sorida, Lihong Sheng, Bogdan Sieriebriennikov, Long Ding, Roberto Bonasio +1 more

Disruption of ATRX-RNA interactions uncovers roles in ATRX localization and PRC2 function

Nature Communications(2020)10.1038/s41467-020-15902-9
N/A
0DataRank · unranked
38 citations

Nicole Medeiros, Robert Warneford-Thomson, Phillip Wulfridge, Qingqing Yan, Joyce Bian +7 more

Distinct PRC2 subunits regulate maintenance and establishment of Polycomb repression during differentiation

Molecular Cell(2021)10.1016/j.molcel.2021.03.038
N/A
0DataRank · unranked
93 citations

Roberto Bonasio, Ana Petracovici

Kr-h1 maintains distinct caste-specific neurotranscriptomes in response to socially regulated hormones

Cell(2021)10.1016/j.cell.2021.10.006
N/A
0DataRank · unranked
89 citations

Karl M. Glastad, Lihong Sheng, Emily J. Shields, Shelley L. Berger, Roberto Bonasio +1 more

Correct dosage of X chromosome transcription is controlled by a nuclear pore component

Cell Reports(2021)10.1016/j.celrep.2021.109236
N/A
0DataRank · unranked
18 citations

Terra M. Kuhn, Pau Pascual‐García, Janko Gospočić, Yemin Lan, Roberto Bonasio +3 more

Intrinsic maturation of sleep output neurons regulates sleep ontogeny in Drosophila

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.14.464413
N/A
0DataRank · unranked
0 citations

An H. Dang, Benjamin Mainwaring, Emily Shields, Karl Schmeckpeper, Roberto Bonasio +2 more

Intrinsic maturation of sleep output neurons regulates sleep ontogeny in Drosophila

Current Biology(2022)10.1016/j.cub.2022.07.054
N/A
0DataRank · unranked
17 citations

Ngoc Bao Hang Luong, An H. Dang, Benjamin Mainwaring, Emily Shields, Karl Schmeckpeper +3 more

Transcription factors interact with RNA to regulate genes

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.27.509776
N/A
0DataRank · unranked
23 citations

Jonathan E. Henninger, Robert Warneford-Thomson, Ming Zheng, Hailey Erb, Kalon J. Overholt +11 more

Permethylation of ribonucleosides provides enhanced mass spectrometry quantification of post-transcriptional modifications

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.26.477959
N/A
0DataRank · unranked
1 citations

Kevin A. Janssen, Alessandro Scacchetti, Roberto Bonasio, Benjamin A. García, Yixuan Xie

Expanding the epitranscriptomic RNA sequencing and modification mapping mass spectrometry toolbox with field asymmetric waveform ion mobility and electrochemical elution liquid chromatography

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.28.514273
N/A
0DataRank · unranked
1 citations

Hee Jong Kim, Lindsay K. Pino, Alessandro Scacchetti, Roberto Bonasio, Benjamin A. García +1 more

Transcription factors interact with RNA to regulate genes

Molecular Cell(2023)10.1016/j.molcel.2023.06.012
N/A
0DataRank · unranked
266 citations

Jonathan E. Henninger, Robert Warneford-Thomson, Ming Zheng, Hailey Erb, Adrienne Vancura +12 more

Hormonal gatekeeping via the blood-brain barrier governs caste-specific behavior in ants

Cell(2023)10.1016/j.cell.2023.08.002
N/A
0DataRank · unranked
47 citations

Karl M. Glastad, Lihong Sheng, Janko Gospočić, Callum J. Kingwell, Shawn M. Davidson +4 more

An efficient cloning method to expand vector and restriction site compatibility of Golden Gate Assembly

Cell Reports Methods(2023)10.1016/j.crmeth.2023.100564
N/A
0DataRank · unranked
15 citations

Roberto Bonasio, Masato Sorida

Expanding the Epitranscriptomic RNA Sequencing and Modification Mapping Mass Spectrometry Toolbox with Field Asymmetric Waveform Ion Mobility and Electrochemical Elution Liquid Chromatography

Analytical Chemistry(2023)10.1021/acs.analchem.2c04114
N/A
0DataRank · unranked
6 citations

Hee Jong Kim, Lindsay K. Pino, Alessandro Scacchetti, Yixuan Xie, F. Robison +4 more

Long ant life span is maintained by a unique heat shock factor

Genes & Development(2023)10.1101/gad.350250.122
N/A
0DataRank · unranked
8 citations

Julian Roessler, Janko Gospočić, Roberto Bonasio, Shelley L. Berger, Karl M. Glastad

A ligation-independent sequencing method reveals tRNA-derived RNAs with blocked 3’ termini

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.06.543899
N/A
0DataRank · unranked
6 citations

Emily J. Shields, Natalie A. Trigg, Jeremy E. Wilusz, Colin C. Conine, Roberto Bonasio +1 more

A ligation-independent sequencing method reveals tRNA-derived RNAs with blocked 3′ termini

Molecular Cell(2024)10.1016/j.molcel.2024.07.008
N/A
0DataRank · unranked
17 citations

Emily J. Shields, Natalie A. Trigg, Grace S. Lee, Jeremy E. Wilusz, Colin C. Conine +2 more

Neuropeptides specify and reprogram division of labor in the leafcutter ant Atta cephalotes

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.11.07.622473
N/A
0DataRank · unranked
0 citations

Karl M. Glastad, Maxxum Fioriti, Matan Sorek, Tierney Gannon, Daniel C. Xu +14 more

Neuropeptides specify and reprogram division of labor in the leafcutter ant Atta cephalotes

Cell(2025)10.1016/j.cell.2025.05.023
N/A
0DataRank · unranked
13 citations

Karl M. Glastad, Maxxum Fioriti, Matan Sorek, Tierney Scarpa, Freddy S Purnell +15 more

Pooled scanning of protein variants identifies novel RNA-binding mutants

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.02.646914
N/A
0DataRank · unranked
0 citations

J. Kenneth Doherty, Emily J. Shields, Shachinthaka D. Dissanayaka Mudiyanselage, Lauren Reich, Kavitha Sarma +3 more

Delineation of a Human Mendelian Disorder of the DNA Demethylation Machinery: TET3 Deficiency

The American Journal of Human Genetics(2020)10.1016/j.ajhg.2019.12.007
N/A
0DataRank · unranked
114 citations

Ana Petracovici, Chongsheng He, Hannah W. Moore, Raymond J. Louie, Muhammad Ansar +27 more

Functionally distinct roles for TET-oxidized 5-methylcytosine bases in somatic reprogramming to pluripotency

Molecular Cell(2020)10.1016/j.molcel.2020.11.045
N/A
0DataRank · unranked
49 citations

Monica Yun Liu, Rexxi D. Prasasya, Tong Wang, Jamie E. DeNizio, N. Adrian Leu +9 more