🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Cecilia N. Arighi

SIB Swiss Institute of Bioinformatics

ORCID: 0000-0002-0803-4817

Also affiliated with European Bioinformatics Institute, University of Delaware

Biochemistry, Genetics and Molecular BiologyComputer Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
14.1Author DataRank

Indexed papers

7in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 7 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

UniProt: the Universal Protein Knowledgebase in 2025

Nucleic Acids Research(2024)10.1093/nar/gkae1010
Top 5%
4.6DataRank
Top 5%2086 citations

María Martin, Sandra Orchard, Michele Magrane, Aduragbemi S. Adesina, Shadab Ahmad +94 more

Papers

Driven by 19 papers — median percentile 86. Top paper: “Role of the mammalian retromer in sorting of the cation-independent mannose 6-phosphate receptor”.

Role of the mammalian retromer in sorting of the cation-independent mannose 6-phosphate receptor

The Journal of Cell Biology(2004)10.1083/jcb.200312055
N/A
15.0DataRank · unranked
607 citations

Lisa M. Hartnell, Ruben C. Aguilar, Carol R. Haft, Juan S. Bonifacino, Cecilia N. Arighi

UniProt: the Universal Protein Knowledgebase in 2025

Nucleic Acids Research(2024)10.1093/nar/gkae1010
Top 5%
4.6DataRank
Top 5%2086 citations

María Martin, Sandra Orchard, Michele Magrane, Aduragbemi S. Adesina, Shadab Ahmad +94 more

BioRED: a rich biomedical relation extraction dataset

Briefings in Bioinformatics(2022)10.1093/bib/bbac282
Top 5%
4.3DataRank
Top 5%154 citations

Po‐Ting Lai, Chih-Hsuan Wei, Cecilia N. Arighi, ZHIYONG LU, Ling Luo

A crowdsourcing open platform for literature curation in UniProt

PLoS Biology(2021)10.1371/journal.pbio.3001464
Top 6%
3.5DataRank
Top 6%163 citations

Qinghua Wang, Hongzhan Huang, Wei Huang, Yongxing Chen, Peter B. McGarvey +3 more

Protein Ontology: a controlled structured network of protein entities

Nucleic Acids Research(2014)10.1093/nar/gkt1173
N/A
2.9DataRank · unranked
76 citations

Cecilia N. Arighi, Judith A. Blake, Carol J. Bult, Karen R. Christie, Julie Cowart +21 more

A roadmap for the functional annotation of protein families: a community perspective

Database(2022)10.1093/database/baac062
Top 14%
1.5DataRank
Top 14%63 citations

Rocío Amorín, Cecilia N. Arighi, Jill Babor, Alex Bateman, Ian K. Blaby +54 more

Recent advances in biocuration: Meeting Report from the fifth International Biocuration Conference

Database(2012)10.1093/database/bas036
N/A
0.701DataRank · unranked
11 citations

C. Arighi, M. J. Cherry, P. D'Eustachio, Robert S. Fulton, R. Kania +38 more

MBDBMetrics: an online metrics tool to measure the impact of biological data resources

Bioinformatics Advances(2023)10.1093/bioadv/vbad180
Top 70%
0.159DataRank
Top 70%1 citations

Alexandr Ignatchenko, María Martin, Alex Bateman, Sandra Orchard, Michele Magrane +88 more

eMIND: Enabling automatic collection of protein variation impacts in Alzheimer’s disease from the literature

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.07.556602
Top 78%
0.104DataRank
Top 78%1 citations

Xihan Qin, Qinghua Wang, Julie Cowart, Hongzhan Huang, Cathy Wu +3 more

Functional implications of glycans and their curation: insights from the workshop held at the 16th Annual International Biocuration Conference in Padua, Italy

Database(2024)10.1093/database/baae073
N/A
0DataRank · unranked
5 citations

Jon Agirre, Yukie Akune, Kiyoko F. Aoki‐Kinoshita, Cecilia N. Arighi, Kristian B. Axelsen +31 more

Perspectives on tracking data reuse across biodata resources

Bioinformatics Advances(2024)10.1093/bioadv/vbae057
N/A
0DataRank · unranked
2 citations

Frederic Bastian, M.H. Buys, Charles E. Cook, Peter D’Eustachio, Melissa Harrison +94 more

Computational strategies to combat COVID-19: useful tools to accelerate SARS-CoV-2 and coronavirus research

Briefings in Bioinformatics(2020)10.1093/bib/bbaa232
N/A
0DataRank · unranked
149 citations

Kevin Lamkiewicz, Alexandre Almeida, Abdel Aouacheria, Cecilia N. Arighi, Alex Bateman +50 more

An overview of the BioCreative 2012 Workshop Track III: interactive text mining task

UNC Libraries(2020)10.17615/z71n-my38
N/A
0DataRank · unranked
4 citations

Y. Li, P. Roberts, S. Jimenez, W. J. Wilbur, Ceri E. Van Slyke +27 more

Computational Strategies to Combat COVID-19: Useful Tools to Accelerate SARS-CoV-2 and Coronavirus Research

Preprints.org(2020)10.20944/preprints202005.0376.v1
N/A
0DataRank · unranked
19 citations

Kevin Lamkiewicz, Alexandre Almeida, Abdel Aouacheria, Cecilia N. Arighi, Alex Bateman +50 more

Modality-Classification of Microscopy Images Using Shallow Variants of Deep Networks

(2020)10.1109/bibm49941.2020.9313467
N/A
0DataRank · unranked
3 citations

Pengyuan Li, Cecilia N. Arighi, Hagit Shatkay, G. Elisabeta Marai, Juan Trelles Trabucco

OUP accepted manuscript

Database(2020)10.1093/database/baz157
Top 100%
0DataRank
Top 100%0 citations

Julie Cowart, Chuming Chen, Karen Ross, Cecilia N. Arighi, Cathy Wu +1 more

Utilizing image and caption information for biomedical document classification

Bioinformatics(2021)10.1093/bioinformatics/btab331
N/A
0DataRank · unranked
20 citations

Xiangying Jiang, Gongbo Zhang, Juan Trelles Trabucco, Daniela Raciti, Cynthia L. Smith +5 more

Overview of the COVID-19 text mining tool interactive demonstration track in BioCreative VII

Database(2022)10.1093/database/baac084
N/A
0DataRank · unranked
3 citations

Lynette Hirschman, Karen Ross, Rose Oughtred, Martin Krallinger, Kara Dolinski +4 more

Enhancing biomedical search interfaces with images

Bioinformatics Advances(2023)10.1093/bioadv/vbad095
N/A
0DataRank · unranked
4 citations

Cecilia N. Arighi, Hagit Shatkay, G. Elisabeta Marai, Juan Trelles Trabucco