Amy Tresenrider

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 13 papers. Top paper: “Exploring whole-genome duplicate gene retention with complex genetic interaction analysis”.

Exploring whole-genome duplicate gene retention with complex genetic interaction analysis

Science(2020)10.1126/science.aaz5667

N/A

3.1DataRank · unranked

125 citations

Benjamin VanderSluis, Alex N Nguyen Ba, Wen Wang, Elizabeth N. Koch, Matej Ušaj +15 more

A multiplexed, single-cell sequencing screen identifies compounds that increase neurogenic reprogramming of murine Muller glia

eLife(2023)10.7554/elife.92091

N/A

0.322DataRank · unranked

7 citations

Marcus Hooper, Levi Todd, Faith Kierney, Nicolai Blasdel, Cole Trapnell +2 more

Long undecoded transcript isoform (LUTI) detection in meiotic budding yeast by direct RNA and transcript leader sequencing

STAR Protocols(2022)10.1016/j.xpro.2022.101145

N/A

0DataRank · unranked

2 citations

Minghao Chia, Folkert J. van Werven, Elçin Ünal, Amy Tresenrider

Single-cell sequencing of individual retinal organoids reveals determinants of cell-fate heterogeneity

Cell Reports Methods(2023)10.1016/j.crmeth.2023.100548

N/A

0DataRank · unranked

33 citations

Akshayalakshmi Sridhar, Kiara C. Eldred, Sophia A. Cuschieri, Dawn Hoffer, Cole Trapnell +2 more

Single-cell sequencing of individual retinal organoids reveals determinants of cell fate heterogeneity

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.31.543087

N/A

0DataRank · unranked

9 citations

Akshayalakshmi Sridhar, Kiara C. Eldred, Sophia A. Cuschieri, Dawn Hoffer, Cole Trapnell +2 more

A multiplexed, single-cell sequencing screen identifies compounds that increase neurogenic reprogramming of murine Muller glia

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.26.559569

N/A

0DataRank · unranked

1 citations

Marcus Hooper, Levi Todd, Faith Kierney, Nicolai Blasdel, Cole Trapnell +2 more

Reviewer #1 (Public Review): A multiplexed, single-cell sequencing screen identifies compounds that increase neurogenic reprogramming of murine Muller glia

(2023)10.7554/elife.92091.1.sa1

N/A

0DataRank · unranked

0 citations

Marcus Hooper, Levi Todd, Faith Kierney, Nicolai Blasdel, Cole Trapnell +2 more

A multiplexed, single-cell sequencing screen identifies compounds that increase neurogenic reprogramming of murine Muller glia

(2023)10.7554/elife.92091.1

N/A

0DataRank · unranked

0 citations

Marcus Hooper, Levi Todd, Faith Kierney, Nicolai Blasdel, Cole Trapnell +2 more

Reviewer #1 (Public Review): A multiplexed, single-cell sequencing screen identifies compounds that increase neurogenic reprogramming of murine Muller glia

(2024)10.7554/elife.92091.2.sa1

N/A

0DataRank · unranked

0 citations

Marcus Hooper, Levi Todd, Faith Kierney, Nicolai Blasdel, Cole Trapnell +2 more

An improved, high yield method for isolating nuclei from individual zebrafish embryos for single-nucleus RNA sequencing

arXiv (Cornell University)(2024)10.48550/arxiv.2411.15309

N/A

0DataRank · unranked

0 citations

Heidi Lee, Amy Tresenrider, Riza M. Daza, Andrew R. Mullen, Jay Shendure +3 more

A statistical framework for inferring genetic requirements from embryo-scale single-cell sequencing experiments

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.03.646654

N/A

0DataRank · unranked

6 citations

Eliza Barkan, Amy Tresenrider, Heidi Lee, Ryan Z. Friedman, Nicholas C Lammers +6 more

An Improved, High-Yield Method for Isolating Nuclei from Individual Zebrafish Embryos for Single-Nucleus RNA Sequencing

Zebrafish(2025)10.1089/zeb.2024.0175

N/A

0DataRank · unranked

0 citations

Heidi Lee, Amy Tresenrider, Riza M. Daza, Andrew R. Mullen, Jay Shendure +3 more

Integrated genomic analysis reveals key features of long undecoded transcript isoform-based gene repression

Molecular Cell(2021)10.1016/j.molcel.2021.03.013

N/A

0DataRank · unranked

39 citations

Kaitlin Morse, Victoria Jorgensen, Minghao Chia, Hanna Liao, Folkert J. van Werven +2 more