Lane Votapka

Biochemistry, Genetics and Molecular BiologyComputer SciencePhysics and Astronomy

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 9 papers. Top paper: “Brownian dynamics simulations of biomolecular diffusional association processes”.

Brownian dynamics simulations of biomolecular diffusional association processes

Wiley Interdisciplinary Reviews Computational Molecular Science(2022)10.1002/wcms.1649

N/A

0DataRank · unranked

24 citations

Lane Votapka, Rommie E. Amaro, Rebecca C. Wade, Abraham Muñiz‐Chicharro

Brownian dynamics simulations of biomolecular diffusional association processes

Zenodo (CERN European Organization for Nuclear Research)(2022)10.5281/zenodo.8388056

N/A

0DataRank · unranked

3 citations

Lane Votapka, Rommie E. Amaro, Rebecca C. Wade, Abraham Muñiz‐Chicharro

Selectivity and ranking of tight-binding JAK-STAT inhibitors using Markovian milestoning with Voronoi tessellations

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.10.516058

N/A

0DataRank · unranked

2 citations

Ambuj Srivastava, Lane Votapka, Rommie E. Amaro, Anupam Anand Ojha

SARS-CoV-2 evolved variants optimize binding to cellular glycocalyx

Cell Reports Physical Science(2023)10.1016/j.xcrp.2023.101346

N/A

0DataRank · unranked

59 citations

Fiona L. Kearns, Mia A. Rosenfeld, Lane Votapka, Lorenzo Casalino, Micah Papanikolas +3 more

Selectivity and Ranking of Tight-Binding JAK-STAT Inhibitors Using Markovian Milestoning with Voronoi Tessellations

Journal of Chemical Information and Modeling(2023)10.1021/acs.jcim.2c01589

N/A

0DataRank · unranked

25 citations

Ambuj Srivastava, Lane Votapka, Rommie E. Amaro, Anupam Anand Ojha

QMrebind: incorporating quantum mechanical force field reparameterization at the ligand binding site for improved drug-target kinetics through milestoning simulations

Chemical Science(2023)10.1039/d3sc04195f

N/A

0DataRank · unranked

15 citations

Lane Votapka, Rommie E. Amaro, Anupam Anand Ojha

An introductory tutorial to the SEEKR2 (Simulation enabled estimation of kinetic rates v. 2) multiscale milestoning software [Article v1.0]

ChemRxiv(2023)10.26434/chemrxiv-2023-kd1wt

N/A

0DataRank · unranked

1 citations

Lane Votapka, Gary Huber, Shang Gao, Rommie E. Amaro, Anupam Anand Ojha

NetSci: A Library for High Performance Biomolecular Simulation Network Analysis Computation

Journal of Chemical Information and Modeling(2024)10.1021/acs.jcim.4c00899

N/A

0DataRank · unranked

3 citations

Lane Votapka, Marcus Hock, Abigail E. Teitgen, J. Andrew McCammon, Andrew D. McCulloch +2 more

An Introductory Tutorial to the SEEKR2 (Simulation Enabled Estimation of Kinetic Rates v. 2) Multiscale Milestoning Software [Article v1.0]

Living Journal of Computational Molecular Science(2024)10.33011/livecoms.5.1.2359

N/A

0DataRank · unranked

2 citations

Lane Votapka, Gary Huber, Shang Gao, Rommie E. Amaro, Anupam Anand Ojha