🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Uwe Ohler

Max Delbrück Center

ORCID: 0000-0002-0881-3116

Also affiliated with Humboldt-Universität zu Berlin

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
7.7Author DataRank

Indexed papers

2in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A single-cell Arabidopsis root atlas reveals developmental trajectories in wild-type and cell identity mutants

Developmental Cell(2022)10.1016/j.devcel.2022.01.008
Top 5%
4.4DataRank
Top 5%363 citations

Che‐Wei Hsu, Trevor M. Nolan, Benjamin Cole, Isaiah Taylor, Laura Greenstreet +7 more

Papers

Driven by 21 papers — median percentile 94. Top paper: “A single-cell Arabidopsis root atlas reveals developmental trajectories in wild-type and cell identity mutants”.

A single-cell Arabidopsis root atlas reveals developmental trajectories in wild-type and cell identity mutants

Developmental Cell(2022)10.1016/j.devcel.2022.01.008
Top 5%
4.4DataRank
Top 5%363 citations

Che‐Wei Hsu, Trevor M. Nolan, Benjamin Cole, Isaiah Taylor, Laura Greenstreet +7 more

Explicit DNase sequence bias modeling enables high-resolution transcription factor footprint detection

Nucleic Acids Research(2014)10.1093/nar/gku810
N/A
3.4DataRank · unranked
77 citations

Christopher L. Frank, Gregory E. Crawford, Uwe Ohler, Galip Gürkan Yardımcı

Standardized annotation of translated open reading frames

Nature Biotechnology(2022)10.1038/s41587-022-01369-0
Top 7%
3.2DataRank
Top 7%252 citations

Jorge Ruiz-Orera, John R. Prensner, Marie A. Brunet, Ferriol Calvet, Irwin Jungreis +31 more

Multimodal single cell data integration challenge: results and lessons learned

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.11.487796
N/A
2.5DataRank · unranked
79 citations

Malte D. Luecken, Daniel B. Burkhardt, Robrecht Cannoodt, Pia Rautenstrauch, Anna Laddach +13 more

Computational analysis of core promoters in the Drosophila genome

Genome Biology(2002)10.1186/gb-2002-3-12-research0087
N/A
0.919DataRank · unranked
457 citations

Guo-chun Liao, Heinrich Niemann, Gerald M. Rubin, Uwe Ohler

Longitudinal Multi-omics Analyses Identify Responses of Megakaryocytes, Erythroid Cells, and Plasmablasts as Hallmarks of Severe COVID-19

Immunity(2020)10.1016/j.immuni.2020.11.017
N/A
0.901DataRank · unranked
405 citations

Neha Mishra, Florian Tran, Thomas Bahmer, Lena Best, Johanna I. Blase +169 more

The BTB transcription factors ZBTB11 and ZFP131 maintain pluripotency by repressing pro-differentiation genes

Cell Reports(2022)10.1016/j.celrep.2022.110524
N/A
0.840DataRank · unranked
22 citations

Congyi Lu, Alexis Morrissey, Lorena S. Lopez-Zepeda, Yingzhen Pei, Simon E. Vidal +8 more

A community-driven roadmap to advance research on translated open reading frames detected by Ribo-seq

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.10.447896
N/A
0.759DataRank · unranked
22 citations

Jorge Ruiz-Orera, John R. Prensner, Marie A. Brunet, Jose Manuel Gonzalez, Michele Magrane +23 more

Identifying RBP Targets with RIP-seq

Methods in Molecular Biology(2016)10.1007/978-1-4939-3067-8_9
N/A
0.680DataRank · unranked
12 citations

Antje Hirsekorn, Uwe Ohler, Neelanjan Mukherjee, Hans-Herman Wessels

High-quality peptide evidence for annotating non-canonical open reading frames as human proteins

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.09.612016
N/A
0.542DataRank · unranked
36 citations

Leron W. Kok, Jonathan M. Mudge, Jorge Ruiz-Orera, Ivo Fierro-Monti, Zhi Sun +38 more

Genome-wide screening identifies Trim33 as an essential regulator of dendritic cell differentiation

Science Immunology(2024)10.1126/sciimmunol.adi1023
N/A
0.514DataRank · unranked
14 citations

Pei-Feng Hsu, Lorena S. Lopez-Zepeda, Görkem Garipler, Eduardo Esteva, Nicholas M. Adams +15 more

A single cell Arabidopsis root atlas reveals developmental trajectories in wild type and cell identity mutants

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.29.178863
N/A
0DataRank · unranked
30 citations

Che‐Wei Hsu, Trevor M. Nolan, Benjamin Cole, Isaiah Taylor, Anna Hendrika Cornelia Vlot +3 more

Altered and allele-specific open chromatin landscape reveals epigenetic and genetic regulators of innate immunity in COVID-19

Cell Genomics(2022)10.1016/j.xgen.2022.100232
N/A
0DataRank · unranked
28 citations

Zhenhua Zhang, Valerie A. C. M. Koeken, Saumya Kumar, Michelle Aillaud, Hsin-Chieh Tsay +19 more

Genome-wide identification of regulatory elements in Sertoli cells

UNC Libraries(2020)10.17615/jvzj-6h82
N/A
0DataRank · unranked
0 citations

Yoichiro Shibata, Danielle M. Maatouk, Uwe Ohler, Gregory E. Crawford, Blanche Capel +2 more

Altered and allele-specific open chromatin landscape reveals epigenetic and genetic regulators of innate immunity in COVID-19

MDC Repository (Max-Delbrueck-Center for Molecular Medicine)(2022)10.5281/zenodo.7270242
N/A
0DataRank · unranked
1 citations

Zhenhua Zhang, Valerie A. C. M. Koeken, Saumya Kumar, Michelle Aillaud, Hsin-Chieh Tsay +20 more

Arabidopsis uses a molecular grounding mechanism and a biophysical circuit breaker to limit floral abscission signaling

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.07.14.500021
N/A
0DataRank · unranked
4 citations

O. Rahul Patharkar, Medhavinee Mijar, Che‐Wei Hsu, John Baer, Chad E. Niederhuth +4 more

Brassinosteroid gene regulatory networks at cellular resolution

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.16.508001
N/A
0DataRank · unranked
2 citations

Nemanja Vukašinović, Che‐Wei Hsu, Jingyuan Zhang, Isabelle Vanhoutte, Rachel Shahan +13 more

Brassinosteroid gene regulatory networks at cellular resolution in the Arabidopsis root

Science(2023)10.1126/science.adf4721
N/A
0DataRank · unranked
164 citations

Nemanja Vukašinović, Che‐Wei Hsu, Jingyuan Zhang, Isabelle Vanhoutte, Rachel Shahan +13 more

Protocol for fast scRNA-seq raw data processing using scKB and non-arbitrary quality control with COPILOT

STAR Protocols(2022)10.1016/j.xpro.2022.101729
N/A
0DataRank · unranked
14 citations

Rachel Shahan, Trevor M. Nolan, Philip N. Benfey, Uwe Ohler, Che‐Wei Hsu

Inferring time series chromatin states for promoter-enhancer pairs based on Hi-C data

BMC Genomics(2021)10.1186/s12864-021-07373-z
N/A
0DataRank · unranked
6 citations

Yunjiang Qiu, Bjoern Gaertner, Maike Sander, Uwe Ohler, Henriette Miko

The BTB transcription factors ZBTB11 and ZFP131 maintain pluripotency by pausing POL II at pro-differentiation genes

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.23.391771
N/A
0DataRank · unranked
3 citations

Congyi Lu, Alexis Morrissey, Lorena S. Lopez-Zepeda, Simon E. Vidal, Begüm Aydın +6 more