Xiaofang Jiang

Also affiliated with United States National Library of Medicine, Sir Run Run Shaw Hospital, Wuhan University, National Center for Biotechnology Information, Zhongnan Hospital of Wuhan University, Zhejiang University, Northeast Petroleum University

Biochemistry, Genetics and Molecular BiologyEnvironmental ScienceAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 38 papers. Top paper: “Characterizing Transcriptional Regulatory Sequences in Coronaviruses and Their Role in Recombination”.

Characterizing Transcriptional Regulatory Sequences in Coronaviruses and Their Role in Recombination

Molecular Biology and Evolution(2020)10.1093/molbev/msaa281

N/A

2.5DataRank · unranked

67 citations

Wei Yan, A. Brantley Hall, Xiaofang Jiang, Yi‐Yan Yang

Large-scale genomic survey with deep learning-based method reveals strain-level phage specificity determinants

GigaScience(2024)10.1093/gigascience/giae017

N/A

0.631DataRank · unranked

22 citations

Keith Dufault‐Thompson, Wei Yan, Tian Cai, Lei Xie, Xiaofang Jiang +1 more

BilR is a gut microbial enzyme that reduces bilirubin to urobilinogen

Nature Microbiology(2024)10.1038/s41564-023-01549-x

N/A

0.628DataRank · unranked

65 citations

Sophia Levy, Keith Dufault‐Thompson, Gabriela Arp, Aoshu Zhong, Glory Minabou Ndjite +11 more

Mining bacterial NGS data vastly expands the complete genomes of temperate phages

NAR Genomics and Bioinformatics(2022)10.1093/nargab/lqac057

N/A

0.457DataRank · unranked

20 citations

Ruohan Wang, Xiangcheng Xie, Yunjia Hu, Jianping Wang, Qiang Sun +17 more

Wastewater surveillance uncovers regional diversity and dynamics of SARS-CoV-2 variants across nine states in the USA

The Science of The Total Environment(2023)10.1016/j.scitotenv.2023.162862

N/A

0.449DataRank · unranked

19 citations

Yi‐Yan Yang, Erin M. Driver, Arjun Magge, Simona Kraberger, Joy M. Custer +8 more

Toxic anti-phage defense proteins inhibited by intragenic antitoxin proteins

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.02.539157

N/A

0.104DataRank · unranked

1 citations

Xiaofang Jiang, Alison B. Hickman, Katherine Klier, Gabriella I. C. Teodoro, Fred Dyda +3 more

High-throughput sequencing of SARS-CoV-2 in wastewater provides insights into circulating variants

medRxiv(2021)10.1101/2021.01.22.21250320

N/A

0DataRank · unranked

53 citations

Simona Kraberger, James Hadfield, Erin M. Driver, Devin A. Bowes, LaRinda A. Holland +23 more

Mining bacterial NGS data vastly expands the complete genomes of temperate phages

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.15.452192

N/A

0DataRank · unranked

4 citations

Ruohan Wang, Xiangcheng Xie, Yunjia Hu, Jianping Wang, Qiang Sun +13 more

The capacity to produce hydrogen sulfide (H 2 S) via cysteine degradation is ubiquitous in the human gut microbiome

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.24.436781

N/A

0DataRank · unranked

3 citations

Xiaofang Jiang, Mihai Pop, Brantley Hall, Domenick J. Braccia

Bacteroidales species in the human gut are a reservoir of antibiotic resistance genes regulated by invertible promoters

npj Biofilms and Microbiomes(2022)10.1038/s41522-021-00260-1

N/A

0DataRank · unranked

58 citations

Brantley Hall, Xiaofang Jiang, Wei Yan

Gut Microbiome–Wide Search for Bacterial Azoreductases Reveals Potentially Uncharacterized Azoreductases Encoded in the Human Gut Microbiome

Drug Metabolism and Disposition(2022)10.1124/dmd.122.000898

N/A

0DataRank · unranked

20 citations

Glory Minabou Ndjite, Ashley Weiss, Sophia Levy, Stephenie Abeysinghe, Xiaofang Jiang +3 more

Taxonomic distribution and evolutionary analysis of the equol biosynthesis gene cluster

BMC Genomics(2022)10.1186/s12864-022-08426-7

N/A

0DataRank · unranked

24 citations

Brantley Hall, Xiaofang Jiang, Keith Dufault‐Thompson

The taxonomic distribution of histamine-secreting bacteria in the human gut microbiome

BMC Genomics(2021)10.1186/s12864-021-08004-3

N/A

0DataRank · unranked

52 citations

Yi‐Yan Yang, A. Brantley Hall, Xiaofang Jiang, Zhongyu Mou

Putative host-derived insertions in the genomes of circulating SARS-CoV-2 variants

University of Southern Queensland ePrints (University of Southern Queensland)(2022)10.1101/2022.01.04.474799

N/A

0DataRank · unranked

0 citations

Keith Dufault-Thompson, Rafaela Salgado Fontenele, Xiaofang Jiang, Yiyan Yang

KH domain proteins: Another family of bacterial RNA matchmakers?

Molecular Microbiology(2021)10.1111/mmi.14842

N/A

0DataRank · unranked

53 citations

Xiaofang Jiang, Maciej M. Basczok, Gisela Storz, Mikołaj Olejniczak

Toxic antiphage defense proteins inhibited by intragenic antitoxin proteins

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2307382120

N/A

0DataRank · unranked

17 citations

Xiaofang Jiang, Alison B. Hickman, Katherine Klier, Gabriella I. C. Teodoro, Fred Dyda +3 more

Evolink: a phylogenetic approach for rapid identification of genotype–phenotype associations in large-scale microbial multispecies data

Bioinformatics(2023)10.1093/bioinformatics/btad215

N/A

0DataRank · unranked

8 citations

Xiaofang Jiang, Yi‐Yan Yang

Discovery of the gut microbial enzyme responsible for bilirubin reduction to urobilinogen

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.02.07.527579

N/A

0DataRank · unranked

10 citations

Sophia Levy, Keith Dufault‐Thompson, Glory Minabou Ndjite, Ashley Weiss, Domenick J. Braccia +8 more

Deciphering Phage-Host Specificity Based on the Association of Phage Depolymerases and Bacterial Surface Glycan with Deep Learning

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.16.545366

N/A

0DataRank · unranked

5 citations

Keith Dufault‐Thompson, Wei Yan, Tian Cai, Lei Xie, Xiaofang Jiang +1 more

The Capacity to Produce Hydrogen Sulfide (H2S) via Cysteine Degradation Is Ubiquitous in the Human Gut Microbiome

Frontiers in Microbiology(2021)10.3389/fmicb.2021.705583

N/A

0DataRank · unranked

135 citations

Xiaofang Jiang, Mihai Pop, A. Brantley Hall, Domenick J. Braccia

High-throughput sequencing of SARS-CoV-2 in wastewater provides insights into circulating variants

Water Research(2021)10.1016/j.watres.2021.117710

N/A

0DataRank · unranked

177 citations

Simona Kraberger, James Hadfield, Erin M. Driver, Devin A. Bowes, LaRinda A. Holland +23 more

Characterizing transcriptional regulatory sequences in coronaviruses and their role in recombination

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.21.163410

N/A

0DataRank · unranked

12 citations

Wei Yan, A. Brantley Hall, Xiaofang Jiang, Yi‐Yan Yang

The three-sided right-handed β-helix is a versatile fold for glycan interactions

Glycobiology(2024)10.1093/glycob/cwae037

N/A

0DataRank · unranked

9 citations

Keith Dufault‐Thompson, Xiaofang Jiang, Audrey A. Burnim

Annotating microbial functions with ProkFunFind

mSystems(2024)10.1128/msystems.00036-24

N/A

0DataRank · unranked

8 citations

Xiaofang Jiang, Keith Dufault‐Thompson

Diribonuclease activity eliminates toxic diribonucleotide accumulation

Cell Reports(2024)10.1016/j.celrep.2024.114759

N/A

0DataRank · unranked

3 citations

Mona W. Orr, Husan Turdiev, Conor C. Jenkins, Justin D Lormand, Tanner M Myers +8 more

Bilirubin reductase shows host-specific associations in animal large intestines

The ISME Journal(2024)10.1093/ismejo/wrae242

N/A

0DataRank · unranked

2 citations

Sophia Levy, Brantley Hall, Xiaofang Jiang, Keith Dufault‐Thompson

Gut Bacteria Encode Reductases that Biotransform Steroid Hormones

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.10.04.616736

N/A

0DataRank · unranked

5 citations

Angela Jiang, Keith Dufault‐Thompson, Sophia Levy, Aoshu Zhong, Jyotsna Talreja Wassan +5 more

Comprehensive Genomic and Evolutionary Analysis of Biofilm Matrix Clusters and Proteins in the Vibrio Genus

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.08.19.608685

N/A

0DataRank · unranked

2 citations

Jing Yan, Rich Olson, Xiaofang Jiang, Yi‐Yan Yang

Gut Microbial Utilization of the Alternative Sweetener, D-Allulose, via AlsE

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.11.07.622513

N/A

0DataRank · unranked

0 citations

Angela Jiang, Charlotte T Ravel, Maggie Grant, Xiaofang Jiang, Brantley Hall +1 more

EzSEA: an interactive web interface for enzyme sequence evolution analysis

Bioinformatics Advances(2024)10.1093/bioadv/vbaf118

N/A

0DataRank · unranked

0 citations

Jerry Zhao, Xiaofang Jiang, Angela K Jiang

Identification of gut bacteria reductases that biotransform steroid hormones

Nature Communications(2025)10.1038/s41467-025-61425-6

N/A

0DataRank · unranked

25 citations

Angela K Jiang, Keith Dufault‐Thompson, Sophia Levy, Aoshu Zhong, Jyotsna Talreja Wassan +5 more

The impact of tokenizer selection in genomic language models

Bioinformatics(2025)10.1093/bioinformatics/btaf456

N/A

0DataRank · unranked

6 citations

Nicole L. Pershing, A K M Rubaiyat Reza Habib, Keith Dufault‐Thompson, W. Zac Stephens, Anne J. Blaschke +3 more

Gut bacteria metabolize natural and synthetic steroid hormones via the reductive OsrABC pathway

Cell Host & Microbe(2025)10.1016/j.chom.2025.09.014

N/A

0DataRank · unranked

14 citations

Kaylie Scorza, L. Ecker, Paola Nol Bernardino, Alexander S. Little, Mary McMillin +9 more

Metabolic cross-feeding of a dietary antioxidant enhances anaerobic energy metabolism by human gut bacteria

Cell Host & Microbe(2025)10.1016/j.chom.2025.07.008

N/A

0DataRank · unranked

9 citations

Angela Jiang, Xiaofang Jiang, Stavroula K. Hatzios, Zhe Zhou

Convergent evolution of oxidized sugar metabolism in commensal and pathogenic microbes in the inflamed gut

Nature Communications(2025)10.1038/s41467-025-56332-9

N/A

0DataRank · unranked

4 citations

Angela K Jiang, M GRANT, Gabriela Arp, Glory Minabou Ndjite, Xiaofang Jiang +2 more

Gut microbial utilization of the alternative sweetener, D-allulose, via AlsE

Communications Biology(2025)10.1038/s42003-025-08391-3

N/A

0DataRank · unranked

2 citations

Angela K Jiang, Charlotte T Ravel, M GRANT, Xiaofang Jiang, Brantley Hall +1 more

Augmenting microbial phylogenomic signal with tailored marker gene sets

Nature Communications(2025)10.1038/s41467-025-64881-2

N/A

0DataRank · unranked

1 citations

Xiaofang Jiang, Qiyun Zhu, Henry Secaira-Morocho

Functional analyses of bacterial NanoRNase B proteins reveals defining features of this enzyme family

Nucleic Acids Research(2025)10.1093/nar/gkaf1384

N/A

0DataRank · unranked

0 citations

Andrew A Burnim, Madison Jermain, Holger Sondermann, Vincent T. Lee, Xiaofang Jiang +2 more