Karthik A. Jagadeesh

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 21 papers. Top paper: “COVID-19 tissue atlases reveal SARS-CoV-2 pathology and cellular targets”.

COVID-19 tissue atlases reveal SARS-CoV-2 pathology and cellular targets

Nature(2021)10.1038/s41586-021-03570-8

N/A

10.7DataRank · unranked

879 citations

Carly G.K. Ziegler, Graham Heimberg, Rachelly Normand, Yiming Yang, Åsa Segerstolpe +95 more

Single-cell meta-analysis of SARS-CoV-2 entry genes across tissues and demographics

Nature Medicine(2021)10.1038/s41591-020-01227-z

N/A

8.2DataRank · unranked

378 citations

Malte D. Luecken, Gökcen Eraslan, Lisa Sikkema, Avinash Waghray, Graham Heimberg +95 more

Single-nucleus and spatial transcriptomics of archival pancreatic cancer reveals multi-compartment reprogramming after neoadjuvant treatment

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.25.267336

N/A

1.6DataRank · unranked

35 citations

Karthik A. Jagadeesh, Jimmy A. Guo, Hannah I. Hoffman, Payman Yadollahpour, Rahul Mohan +46 more

Intra- and Inter-cellular Rewiring of the Human Colon during Ulcerative Colitis

Cell(2019)10.1016/j.cell.2019.06.029

N/A

1.1DataRank · unranked

1412 citations

Moshe Biton, Keri M. Sullivan, Grace Burgin, Daniel B. Graham, Rebecca H. Herbst +28 more

Leveraging single-cell ATAC-seq and RNA-seq to identify disease-critical fetal and adult brain cell types

Nature Communications(2024)10.1038/s41467-024-44742-0

N/A

1.1DataRank · unranked

44 citations

Buu Truong, Kushal K. Dey, Soumya Raychaudhuri, Sharon L. R. Kardia, Alkes L. Price +3 more

Tissue-specific enhancer–gene maps from multimodal single-cell data identify causal disease alleles

Nature Genetics(2024)10.1038/s41588-024-01682-1

N/A

0.972DataRank · unranked

52 citations

Kathryn Weinand, Shakson Isaac, Kushal K. Dey, Karthik A. Jagadeesh, Masahiro Kanai +86 more

Polygenic enrichment distinguishes disease associations of individual cells in single-cell RNA-seq data

Nature Genetics(2022)10.1038/s41588-022-01167-z

N/A

0.849DataRank · unranked

286 citations

Kangcheng Hou, Kushal K. Dey, Saori Sakaue, Karthik A. Jagadeesh, Kathryn Weinand +10 more

Systematically characterizing the roles of E3-ligase family members in inflammatory responses with massively parallel Perturb-seq

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.23.525198

N/A

0.836DataRank · unranked

23 citations

Basak Eraslan, Olena Kuksenko, Kushal K. Dey, Karthik A. Jagadeesh, Pratiksha I. Thakore +18 more

Identifying disease-critical cell types and cellular processes by integrating single-cell RNA-sequencing and human genetics

Nature Genetics(2022)10.1038/s41588-022-01187-9

N/A

0.820DataRank · unranked

235 citations

Kushal K. Dey, Daniel T. Montoro, Rahul Mohan, Steven Gazal, Jesse M. Engreitz +4 more

SAIGE-GENE+ improves the efficiency and accuracy of set-based rare variant association tests

Nature Genetics(2022)10.1038/s41588-022-01178-w

N/A

0.749DataRank · unranked

146 citations

Wenjian Bi, Zhangchen Zhao, Kushal K. Dey, Karthik A. Jagadeesh, Konrad J. Karczewski +4 more

Leveraging single-cell ATAC-seq to identify disease-critical fetal and adult brain cell types

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.20.445067

N/A

0.646DataRank · unranked

11 citations

Kushal K. Dey, Soumya Raychaudhuri, Sharon L. R. Kardia, Alkes L. Price, Karthik A. Jagadeesh +2 more

Mapping the dynamic genetic regulatory architecture of HLA genes at single-cell resolution

Nature Genetics(2023)10.1038/s41588-023-01586-6

N/A

0.571DataRank · unranked

44 citations

Amber Shen, Saisriram Gurajala, Aparna Nathan, Laurie Rumker, Vitor R. C. Aguiar +95 more

Identifying disease-critical cell types and cellular processes across the human body by integration of single-cell profiles and human genetics

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.19.436212

N/A

0.553DataRank · unranked

39 citations

Kushal K. Dey, Daniel T. Montoro, Rahul Mohan, Steven Gazal, Jesse M. Engreitz +4 more

Polygenic enrichment distinguishes disease associations of individual cells in single-cell RNA-seq data

Research Square(2021)10.21203/rs.3.rs-933790/v1

N/A

0.505DataRank · unranked

28 citations

Kangcheng Hou, Bogdan Paşaniuc, Alkes L. Price, Kushal K. Dey, Karthik A. Jagadeesh +10 more

Tissue-specific enhancer-gene maps from multimodal single-cell data identify causal disease alleles

medRxiv(2022)10.1101/2022.10.27.22281574

N/A

0.425DataRank · unranked

16 citations

Kathryn Weinand, Shakson Isaac, Kushal K. Dey, Karthik A. Jagadeesh, Masahiro Kanai +10 more

Combining SNP-to-gene linking strategies to pinpoint disease genes and assess disease omnigenicity

medRxiv(2021)10.1101/2021.08.02.21261488

N/A

0.386DataRank · unranked

7 citations

Omer Weissbrod, Farhad Hormozdiari, Kushal K. Dey, Joseph Nasser, Karthik A. Jagadeesh +8 more

Mapping the dynamic genetic regulatory architecture of HLA genes at single-cell resolution

medRxiv(2023)10.1101/2023.03.14.23287257

N/A

0.360DataRank · unranked

10 citations

Amber Shen, Saori Sakaue, Yang Luo, Saisriram Gurajala, Aparna Nathan +23 more

Linking regulatory variants to target genes by integrating single-cell multiome methods and genomic distance

Nature Genetics(2025)10.1038/s41588-025-02220-3

N/A

0.331DataRank · unranked

6 citations

Karthik A. Jagadeesh, Kushal K. Dey, Alkes L. Price, Elizabeth Dorans

Set-based rare variant association tests for biobank scale sequencing data sets

medRxiv(2021)10.1101/2021.07.12.21260400

N/A

0.312DataRank · unranked

7 citations

Wenjian Bi, Zhangchen Zhao, Kushal K. Dey, Karthik A. Jagadeesh, Konrad J. Karczewski +4 more

Polygenic enrichment distinguishes disease associations of individual cells in single-cell RNA-seq data

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.24.461597

N/A

0.241DataRank · unranked

4 citations

Kangcheng Hou, Kushal K. Dey, Saori Sakaue, Karthik A. Jagadeesh, Kathryn Weinand +10 more

Single-nucleus RNA-seq of frozen archival primary pancreatic ductal adenocarcinoma uncovers multi-compartment intratumoral heterogeneity associated with neoadjuvant treatment.

Journal of Clinical Oncology(2020)10.1200/jco.2020.38.15_suppl.4633

N/A

0DataRank · unranked

0 citations

Hannah I. Hoffman, Orr Ashenberg, Eugene Drokhlyansky, Nicholas Van Wittenberghe, Samouil Farhi +18 more