HoJoon Lee

Also affiliated with Stratford University, Stanford University

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

5.7Author DataRank

Indexed papers

5in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 5 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A draft human pangenome reference

Nature(2023)10.1038/s41586-023-05896-x

Top 4%

5.1DataRank

Top 4%1169 citations

Mobin Asri, Jana Ebler, Daniel Doerr, Marina Haukness, Hickey, Glenn +95 more

Papers

Driven by 29 papers — median percentile 34. Top paper: “A draft human pangenome reference”.

A draft human pangenome reference

Nature(2023)10.1038/s41586-023-05896-x

Top 4%

5.1DataRank

Top 4%1169 citations

Mobin Asri, Jana Ebler, Daniel Doerr, Marina Haukness, Hickey, Glenn +95 more

Pangenome graph construction from genome alignments with Minigraph-Cactus

Nature Biotechnology(2023)10.1038/s41587-023-01793-w

N/A

5.0DataRank · unranked

318 citations

Jean Monlong, Jana Ebler, Adam M. Novak, Jordan M. Eizenga, Yan Gao +94 more

Increased mutation and gene conversion within human segmental duplications

Nature(2023)10.1038/s41586-023-05895-y

N/A

2.1DataRank · unranked

114 citations

Philip C. Dishuck, William T. Harvey, William S. DeWitt, Xavi Guitart, Michael E. Goldberg +108 more

Recombination between heterologous human acrocentric chromosomes

Nature(2023)10.1038/s41586-023-05976-y

N/A

0.710DataRank · unranked

113 citations

Silvia Buonaiuto, Leonardo Gomes de Lima, Tamara Potapova, Arang Rhie, Sergey Koren +106 more

CRISPRpic: fast and precise analysis for CRISPR-induced mutations via p refixed i ndex c ounting

NAR Genomics and Bioinformatics(2020)10.1093/nargab/lqaa012

N/A

0.477DataRank · unranked

23 citations

Howard Y. Chang, Seung Woo Cho, Hanlee P. Ji, HoJoon Lee

Detection and analysis of complex structural variation in human genomes across populations and in brains of donors with psychiatric disorders

Cell(2024)10.1016/j.cell.2024.09.014

N/A

0.399DataRank · unranked

8 citations

Joseph G. Arthur, Hanmin Guo, Taeyoung Kim, Yi‐Ling Huang, Reenal Pattni +32 more

Pan-conserved segment tags identify ultra-conserved sequences across assemblies in the human pangenome

Cell Reports Methods(2023)10.1016/j.crmeth.2023.100543

Top 50%

0.352DataRank

Top 50%6 citations

Stephanie Greer, Dmitri S. Pavlichin, Bo Zhou, Alexander E. Urban, Tsachy Weissman +94 more

The Human Pangenome’s sequence conservation reveals a landscape of polymorphic structural variations

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.06.511239

Top 66%

0.187DataRank

Top 66%2 citations

Stephanie Greer, Dmitri S. Pavlichin, Chris Hughes, Bo Zhou, Tsachy Weissman +2 more

Characterization of the consensus mucosal microbiome of colorectal cancer

NAR Cancer(2021)10.1093/narcan/zcab049

N/A

0DataRank · unranked

21 citations

Susan M. Grimes, Stephanie Greer, Matthew Kubit, HoJoon Lee, Lincoln Nadauld +2 more

Profiling diverse sequence tandem repeats in colorectal cancer reveals co-occurrence of microsatellite and chromosomal instability involving Chromosome 8

Genome Medicine(2021)10.1186/s13073-021-00958-z

N/A

0DataRank · unranked

14 citations

Stephanie Greer, Erik Hopmans, Susan M. Grimes, HoJoon Lee, Lan Zhao +6 more

A Deep Learning Model for Molecular Label Transfer that Enables Cancer Cell Identification from Histopathology Images

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.18.436004

N/A

0DataRank · unranked

4 citations

HoJoon Lee, Xiao Tan, Carlos J. Suarez, Noemi Andor, Quan Nguyen +2 more

Characterization of the consensus mucosal microbiome of colorectal cancer

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.02.446807

N/A

0DataRank · unranked

3 citations

Susan M. Grimes, Stephanie Greer, Matthew Kubit, HoJoon Lee, Lincoln Nadauld +2 more

KmerKeys: a web resource for searching indexed genome assemblies and variants

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.17.444256

N/A

0DataRank · unranked

0 citations

HoJoon Lee, Stephanie Greer, Susan M. Grimes, Tsachy Weissman, Hanlee P. Ji +1 more

Colorectal Cancer Metastases in the Liver Establish Immunosuppressive Spatial Networking between Tumor-Associated SPP1 + Macrophages and Fibroblasts

Clinical Cancer Research(2022)10.1158/1078-0432.ccr-22-2041

N/A

0DataRank · unranked

198 citations

Kaishu Mason, Susan M. Grimes, Zilu Zhou, Billy T. Lau, Xiangqi Bai +9 more

A deep learning model for molecular label transfer that enables cancer cell identification from histopathology images

npj Precision Oncology(2022)10.1038/s41698-022-00252-0

N/A

0DataRank · unranked

40 citations

HoJoon Lee, Xiao Tan, Carlos J. Suarez, Noemi Andor, Quan Nguyen +2 more

Exploratory genomic analysis of high-grade neuroendocrine neoplasms across diverse primary sites

Endocrine Related Cancer(2022)10.1530/erc-22-0015

N/A

0DataRank · unranked

11 citations

Lan Zhao, Paul Van Hummelen, Brock A. Martin, Kathleen Hornbacker, HoJoon Lee +5 more

KmerKeys: a web resource for searching indexed genome assemblies and variants

Nucleic Acids Research(2022)10.1093/nar/gkac266

N/A

0DataRank · unranked

5 citations

HoJoon Lee, Stephanie Greer, Susan M. Grimes, Tsachy Weissman, Hanlee P. Ji +1 more

The Gastric Cancer Registry: A Genomic Translational Resource for Multidisciplinary Research in Stomach Malignancies

medRxiv(2022)10.1101/2022.03.10.22271914

Top 100%

0DataRank

Top 100%0 citations

Susan M. Grimes, HoJoon Lee, Stephanie U Greer, Gi Won Shin, Madeline McNamara +14 more

The Gastric Cancer Registry: A Genomic Translational Resource for Multidisciplinary Research in Gastric Cancer

Cancer Epidemiology Biomarkers & Prevention(2022)10.1158/1055-9965.epi-22-0308

Top 100%

0DataRank

Top 100%0 citations

Susan M. Grimes, HoJoon Lee, Stephanie Greer, Gi Won Shin, Madeline McNamara +14 more

Data from Colorectal Cancer Metastases in the Liver Establish Immunosuppressive Spatial Networking between Tumor-Associated SPP1+ Macrophages and Fibroblasts

(2023)10.1158/1078-0432.c.6532742

N/A

0DataRank · unranked

0 citations

Kaishu Mason, Susan M. Grimes, Zilu Zhou, Billy T. Lau, Xiangqi Bai +9 more

The single-cell spatial landscape of stage III colorectal cancers

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.11.07.622577

N/A

0DataRank · unranked

1 citations

HoJoon Lee, Minh‐Phuong Tran, Richard Cruz, Anuja Sathe, Xiangqi Bai +11 more

The single-cell spatial landscape of stage III colorectal cancers

npj Precision Oncology(2025)10.1038/s41698-025-00853-5

N/A

0DataRank · unranked

10 citations

HoJoon Lee, Minh Tran, Richard Cruz, Anuja Sathe, Xiangqi Bai +11 more

Whole genome analysis identifies the association of TP53 genomic deletions with lower survival in Stage III colorectal cancer

Scientific Reports(2020)10.1038/s41598-020-61643-6

N/A

0DataRank · unranked

14 citations

Paul Van Hummelen, Matthew Kubit, HoJoon Lee, John Bell, Susan M. Grimes +9 more

Unique k -mer sequences for validating cancer-related substitution, insertion and deletion mutations

NAR Cancer(2020)10.1093/narcan/zcaa034

N/A

0DataRank · unranked

10 citations

Ahmed Shuaibi, John Bell, Dmitri S. Pavlichin, Hanlee P. Ji, HoJoon Lee

Profiling SARS-CoV-2 mutation fingerprints that range from the viral pangenome to individual infection quasispecies

medRxiv(2020)10.1101/2020.11.02.20224816

N/A

0DataRank · unranked

8 citations

Dmitri S. Pavlichin, Anna C. Hooker, Alison Almeda, Gi Won Shin, Jiamin Chen +6 more

Colorectal cancer metastases in the liver establish immunosuppressive spatial networking between tumor associated SPP1 + macrophages and fibroblasts

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.01.273672

N/A

0DataRank · unranked

3 citations

Kaishu Mason, Susan M. Grimes, Zilu Zhou, Billy T. Lau, Xiangqi Bai +9 more

Profiling diverse sequence tandem repeats in colorectal cancer reveals co-occurrence of microsatellite and chromosomal instability involving Chromosome 8

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.23.422767

N/A

0DataRank · unranked

1 citations

Stephanie Greer, Erik Hopmans, Susan M. Grimes, HoJoon Lee, Lan Zhao +6 more

Unique K-mer sequences for validating cancer-related substitution, insertion and deletion mutations

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.20.163113

N/A

0DataRank · unranked

0 citations

Ahmed Shuaibi, John Bell, Dmitri S. Pavlichin, Hanlee P. Ji, HoJoon Lee

Profiling SARS-CoV-2 mutation fingerprints that range from the viral pangenome to individual infection quasispecies

Genome Medicine(2021)10.1186/s13073-021-00882-2

N/A

0DataRank · unranked

30 citations

Dmitri S. Pavlichin, Anna C. Hooker, Alison Almeda, Gi Won Shin, Jiamin Chen +6 more

HoJoon Lee

Indexed papers

Top data-sharing exemplar

Papers