Thomas D. Otto

Centre National de la Recherche Scientifique

Also affiliated with Inserm, Universität Hamburg, Université de Montpellier, Laboratory of Pathogens and Host Immunity, Arthritis UK, Institute of Infection and Immunity, University of Glasgow, Bernhard Nocht Institute for Tropical Medicine

MedicineBiochemistry, Genetics and Molecular BiologyImmunology and Microbiology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

3in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Papers

Driven by 20 papers. Top paper: “Real-time sequencing”.

Real-time sequencing

Nature Reviews Microbiology(2011)10.1038/nrmicro2638

N/A

1.2DataRank · unranked

14 citations

Thomas D. Otto

The exception that proves the rule: Virulence gene expression at the onset of Plasmodium falciparum blood stage infections

PLoS Pathogens(2023)10.1371/journal.ppat.1011468

N/A

0.424DataRank · unranked

11 citations

Ralf Krumkamp, Jana Held, Heidrun von Thien, Irene Wittmann, Yannick D. Höppner +19 more

Single cell and spatial transcriptomic analyses reveal microglia-plasma cell crosstalk in the brain during Trypanosoma brucei infection

10.21203/rs.3.rs-1526092/v1

N/A

0.252DataRank · unranked

3 citations

Praveena Chandrasegaran, Matthew C. Sinton, Emma M. Briggs, Thomas D. Otto, Rhiannon Heslop +6 more

Integrative single cell and spatial transcriptomic analysis reveal reciprocal microglia-plasma cell crosstalk in the mouse brain during chronic Trypanosoma brucei infection

10.1101/2022.03.25.485502

N/A

0.208DataRank · unranked

3 citations

Praveena Chandrasegaran, Matthew C. Sinton, Emma M. Briggs, Thomas D. Otto, Rhiannon Heslop +6 more

A single-nucleotide polymorphism in a Plasmodium berghei ApiAP2 transcription factor alters the development of host immunity

Science Advances(2020)10.1126/sciadv.aaw6957

N/A

0DataRank · unranked

14 citations

Abhisheka Bansal, Patrick W. Sheehan, Mirna Peña, Alvaro Molina-Cruz, Lindsey Orchard +13 more

The apicoplast link to fever-survival and artemisinin-resistance in the malaria parasite

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.10.419788

N/A

0DataRank · unranked

8 citations

Chengqi Wang, Jenna Oberstaller, Phaedra Thomas, Thomas D. Otto, Debora Casandra +10 more

The apicoplast link to fever-survival and artemisinin-resistance in the malaria parasite

Nature Communications(2021)10.1038/s41467-021-24814-1

N/A

0DataRank · unranked

66 citations

Chengqi Wang, Jenna Oberstaller, Phaedra Thomas, Thomas D. Otto, Debora Casandra +10 more

Controlled human malaria infection with PvW1 – a new clone of Plasmodium vivax with high quality genome assembly

medRxiv(2021)10.1101/2021.07.23.21259839

N/A

0DataRank · unranked

0 citations

Yrene Themistocleous, Sarah E. Silk, Jordan R. Barrett, Alison Kemp, Doris Quinkert +39 more

MalariaSED: a deep learning framework to decipher the regulatory contributions of noncoding variants in malaria parasites

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.21.508539

N/A

0DataRank · unranked

2 citations

Yibo Dong, Chang Li, Jenna Oberstaller, Min Zhang, Justin Gibbons +11 more

The exception that proves the rule: Virulence gene expression at the onset of Plasmodium falciparum blood stage infections

medRxiv(2022)10.1101/2022.12.05.22283093

N/A

0DataRank · unranked

0 citations

Ralf Krumkamp, Jana Held, Heidrun von Thien, Irene Wittmann, Yannick D. Höppner +18 more

Increased circulation time of Plasmodium falciparum underlies persistent asymptomatic infection in the dry season

Nature Medicine(2020)10.1038/s41591-020-1084-0

N/A

0DataRank · unranked

145 citations

Hannah Fleckenstein, Richard Thomson-Luque, Safiatou Doumbo, Nathália F. Lima, Carrie L. Anderson +32 more

Chemogenomic Profiling of a Plasmodium falciparum Transposon Mutant Library Reveals Shared Effects of Dihydroartemisinin and Bortezomib on Lipid Metabolism and Exported Proteins

Microbiology Spectrum(2023)10.1128/spectrum.05014-22

N/A

0DataRank · unranked

9 citations

Jenna Oberstaller, Chengqi Wang, Debora Casandra, Min Zhang, Jyotsna Chawla +7 more

MalariaSED: a deep learning framework to decipher the regulatory contributions of noncoding variants in malaria parasites

Genome biology(2023)10.1186/s13059-023-03063-z

N/A

0DataRank · unranked

3 citations

Yibo Dong, Chang Li, Jenna Oberstaller, Min Zhang, Justin Gibbons +11 more

A novel Modulator of Ring Stage Translation (MRST) gene alters artemisinin sensitivity in Plasmodium falciparum

mSphere(2023)10.1128/msphere.00152-23

N/A

0DataRank · unranked

2 citations

Justin Gibbons, Chengqi Wang, Camilla Valente Pires, Min Zhang, Faiza Amber Siddiqui +7 more

Supersaturation mutagenesis reveals adaptive rewiring of essential genes among malaria parasites

Science(2025)10.1126/science.adq7347

N/A

0DataRank · unranked

21 citations

Shulin Xu, Deboki Naskar, Min Zhang, Chengqi Wang, Justin Gibbons +6 more

Phenotypic screens reveal Plasmodium falciparum genetic factors associated with infection of sickle-trait cells

Blood Cells Molecules and Diseases(2025)10.1016/j.bcmd.2025.102951

N/A

0DataRank · unranked

0 citations

Jenna Oberstaller, Chengqi Wang, Justin Gibbons, Chiara Micchelli, Min Zhang +5 more

Phenotypic Screens Identify Genetic Factors Associated with Gametocyte Development in the Human Malaria Parasite Plasmodium falciparum

Microbiology Spectrum(2023)10.1128/spectrum.04164-22

N/A

0DataRank · unranked

8 citations

Ilana Goldowitz, Jenna Oberstaller, Min Zhang, Camilla Valente Pires, Francesca M. Navarro +9 more

Refining the transcriptome of the human malaria parasite Plasmodium falciparum using amplification-free RNA-seq

BMC Genomics(2020)10.1186/s12864-020-06787-5

N/A

0DataRank · unranked

108 citations

Philipp Ross, Lindsey Orchard, Timothy J. Russell, Thomas D. Otto, Matthew Berriman +3 more

Testing the impact of a single nucleotide polymorphism in a Plasmodium berghei ApiAP2 transcription factor on experimental cerebral malaria in mice

Scientific Reports(2020)10.1038/s41598-020-70617-7

N/A

0DataRank · unranked

14 citations

Abhisheka Bansal, Patrick W. Sheehan, Mirna Peña, Clare K. Cimperman, Qi Chen +6 more

The apicoplast link to fever-survival and artemisinin-resistance in the malaria parasite

Apollo (University of Cambridge)(2020)10.17863/cam.73418

N/A

0DataRank · unranked

12 citations

Chengqi Wang, Jenna Oberstaller, Phaedra Thomas, Thomas D. Otto, Debora Casandra +10 more