🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Mikhail Kashlev

National Cancer Institute

ORCID: 0000-0002-1260-6486

Also affiliated with Center for Cancer Research

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 3%percentile
0.960Author DataRank

Indexed papers

1in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Comprehensive transcription terminator atlas for Bacillus subtilis

Nature Microbiology(2022)10.1038/s41564-022-01240-7
Top 21%
0.960DataRank
Top 21%40 citations

Rishi K. Vishwakarma, Helen Yakhnin, Katsuhiko Murakami, Mikhail Kashlev, Paul Babitzke +1 more

Papers

Driven by 18 papers — median percentile 79. Top paper: “NusG is an intrinsic transcription termination factor that stimulates motility and coordinates gene expression with NusA”.

NusG is an intrinsic transcription termination factor that stimulates motility and coordinates gene expression with NusA

eLife(2021)10.7554/elife.61880
N/A
1.3DataRank · unranked
67 citations

Reid T. Oshiro, Alexander V. Yakhnin, Rishi K. Vishwakarma, Mikhail Kashlev, Daniel B. Kearns +2 more

Comprehensive transcription terminator atlas for Bacillus subtilis

Nature Microbiology(2022)10.1038/s41564-022-01240-7
Top 21%
0.960DataRank
Top 21%40 citations

Rishi K. Vishwakarma, Helen Yakhnin, Katsuhiko Murakami, Mikhail Kashlev, Paul Babitzke +1 more

Escherichia coli σ 38 promoters use two UP elements instead of a −35 element: resolution of a paradox and discovery that σ 38 transcribes ribosomal promoters

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.05.936344
N/A
0DataRank · unranked
0 citations

Zhe Sun, Yixiong Chen, Cédric Cagliero, Y. Zuo, Yan Zhou +4 more

Nascent RNA sequencing identifies a widespread sigma70-dependent pausing regulated by Gre factors in bacteria

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.25.354225
N/A
0DataRank · unranked
0 citations

Alexander V. Yakhnin, Peter Fitzgerald, Carl E. Mclntosh, Mikhail Kashlev, Zhe Sun

Nascent RNA sequencing identifies a widespread sigma70-dependent pausing regulated by Gre factors in bacteria

Nature Communications(2021)10.1038/s41467-021-21150-2
N/A
0DataRank · unranked
21 citations

Alexander V. Yakhnin, Peter Fitzgerald, Carl E. Mclntosh, Mikhail Kashlev, Zhe Sun

Transcriptome-Wide Effects of NusA on RNA Polymerase Pausing in Bacillus subtilis

Journal of Bacteriology(2022)10.1128/jb.00534-21
N/A
0DataRank · unranked
26 citations

Zachary F. Mandell, Alexander V. Yakhnin, Mikhail Kashlev, Paul Babitzke, Oshadhi T. Jayasinghe

The fidelity of transcription in human cells

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.10.491385
N/A
0DataRank · unranked
1 citations

Bert M. Verheijen, X. Zhang, Biao Huang, Aeowynn J. Coakley, Eric McGann +16 more

The fidelity of transcription in human cells

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2210038120
N/A
0DataRank · unranked
22 citations

Bert M. Verheijen, Xinmin Zhang, Biao Huang, Aeowynn J. Coakley, Eric McGann +16 more

Robust regulation of transcription pausing in Escherichia coli by the ubiquitous elongation factor NusG

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2221114120
N/A
0DataRank · unranked
18 citations

Mikhail Bubunenko, Zachary F. Mandell, Lucyna Lubkowska, Sara Husher, Paul Babitzke +2 more

Chromatin Buffers Torsional Stress During Transcription

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.10.15.618270
N/A
0DataRank · unranked
5 citations

Lucyna Lubkowska, Shuming Zhang, Chuang Tan, Yifeng Hong, Robert K. Fulbright +8 more

RNA Polymerase II is a Polar Roadblock to a Progressing DNA Fork

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.10.11.617674
N/A
0DataRank · unranked
1 citations

James T. Inman, Lucyna Lubkowska, Tung T. Le, Jin Qian, Porter M. Hall +4 more

Characterization of bacterial intrinsic transcription terminators identified with TERMITe – a novel method for comprehensive analysis of Term-seq data

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.05.16.594410
N/A
0DataRank · unranked
0 citations

Sandeepani Ranaweera, Agnieszka Chełkowska-Pauszek, Mikhail Kashlev, Paul Babitzke, Marek Żywicki +1 more

Characterization of bacterial intrinsic transcription terminators identified with TERMITe—a novel method for comprehensive analysis of Term-seq data

Nucleic Acids Research(2025)10.1093/nar/gkaf553
N/A
0DataRank · unranked
7 citations

Sandeepani Ranaweera, Agnieszka Chełkowska-Pauszek, Mikhail Kashlev, Paul Babitzke, Marek Żywicki +1 more

RNA polymerase II is a polar roadblock to a progressing DNA fork

Nature Communications(2025)10.1038/s41467-025-63662-1
N/A
0DataRank · unranked
6 citations

James T. Inman, Lucyna Lubkowska, Tung T. Le, Jin Qian, Porter M. Hall +6 more

Chromatin buffers torsional stress during transcription

Science(2025)10.1126/science.adv0134
N/A
0DataRank · unranked
2 citations

Lucyna Lubkowska, Shuming Zhang, Chuang Tan, Yifeng Hong, Xiaomeng Jia +10 more

NusG-dependent RNA polymerase pausing is a frequent function of this universally conserved transcription elongation factor

Critical Reviews in Biochemistry and Molecular Biology(2020)10.1080/10409238.2020.1828261
N/A
0DataRank · unranked
27 citations

Mikhail Kashlev, Paul Babitzke, Alexander V. Yakhnin

Nascent RNA profiling reveals genome-wide productive reiterative initiation regulating gene transcription in bacteria

Nucleic Acids Research(2025)10.1093/nar/gkaf1353
N/A
0DataRank · unranked
0 citations

Guozhong Huang, Yuqiong Zhang, Shuang Wang, Mikhail Kashlev, Zhe Sun

NusG is an intrinsic transcription termination factor that stimulates motility and coordinates global gene expression with NusA

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.07.241513
N/A
0DataRank · unranked
1 citations

Reid T. Oshiro, Alexander V. Yakhnin, Mikhail Kashlev, Daniel B. Kearns, Paul Babitzke +1 more