🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Xiaoyu Zhuo

Washington University in St. Louis

ORCID: 0000-0002-1400-5609

Agricultural and Biological SciencesBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 3%percentile

1.0Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Regulatory transposable elements in the encyclopedia of DNA elements

Nature Communications(2024)10.1038/s41467-024-51921-6

Top 20%

1.0DataRank

Top 20%54 citations

Jason D. Chobirko, Xiaoyu Zhuo, Cédric Feschotte, Ting Wang, Alan Y. Du

Papers

Driven by 13 papers — median percentile 80. Top paper: “Conserved and divergent gene regulatory programs of the mammalian neocortex”.

Conserved and divergent gene regulatory programs of the mammalian neocortex

Nature(2023)10.1038/s41586-023-06819-6

N/A

1.9DataRank · unranked

113 citations

Ethan J. Armand, Wenliang Wang, Seo Yeon Lee, Jingtian Zhou, Yang Eric Li +28 more

Regulatory transposable elements in the encyclopedia of DNA elements

Nature Communications(2024)10.1038/s41467-024-51921-6

Top 20%

1.0DataRank

Top 20%54 citations

Jason D. Chobirko, Xiaoyu Zhuo, Cédric Feschotte, Ting Wang, Alan Y. Du

Functional characterization of enhancer activity during a long terminal repeat's evolution

Genome Research(2022)10.1101/gr.276863.122

N/A

0.416DataRank · unranked

15 citations

Xiaoyu Zhuo, Vasavi Sundaram, Nicholas O. Jensen, Hemangi G. Chaudhari, Nancy L. Saccone +3 more

methylGrapher: genome-graph-based processing of DNA methylation data from whole genome bisulfite sequencing

Nucleic Acids Research(2025)10.1093/nar/gkaf028

N/A

0.330DataRank · unranked

8 citations

Juan F Macias-Velasco, Xiaoyu Zhuo, Edward A. Belter, Chad Tomlinson, John Garza +4 more

Evolution of transposable element-derived enhancer activity

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.16.483999

N/A

0.111DataRank · unranked

1 citations

Xiaoyu Zhuo, Vasavi Sundaram, Nicholas O. Jensen, Hemangi G. Chaudhari, Nancy L. Saccone +3 more

Epigenomic differences in the human and chimpanzee genomes are associated with structural variation

Genome Research(2020)10.1101/gr.263491.120

N/A

0DataRank · unranked

14 citations

Alan Y. Du, Erica C. Pehrsson, Daofeng Li, Ting Wang, Xiaoyu Zhuo

Amniotes co-opt intrinsic genetic instability to protect germ-line genome integrity

Nature Communications(2023)10.1038/s41467-023-36354-x

N/A

0DataRank · unranked

14 citations

Hongxiao Cui, Chi Song, Jiafei Teng Shen, Xiaoyu Zhuo, Ruoqiao Huiyi Wang +20 more

Modbed track: Visualization of modified bases in single-molecule sequencing

Cell Genomics(2023)10.1016/j.xgen.2023.100455

N/A

0DataRank · unranked

3 citations

Xiaoyu Zhuo, Jessica K. Harrison, Shane Liu, Ting Wang, Daofeng Li

Comparing genomic and epigenomic features across species using the WashU Comparative Epigenome Browser

Genome Research(2023)10.1101/gr.277550.122

N/A

0DataRank · unranked

11 citations

Silas Hsu, Deepak Purushotham, Prashant Kumar Kuntala, Jessica K. Harrison, Alan Y. Du +4 more

Comparative single cell epigenomic analysis of gene regulatory programs in the rodent and primate neocortex

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.08.536119

N/A

0DataRank · unranked

4 citations

Ethan J. Armand, Wenliang Wang, Seo Yeon Lee, Jingtian Zhou, Yang Eric Li +23 more

Exploring the coronavirus pandemic with the WashU Virus Genome Browser

Nature Genetics(2020)10.1038/s41588-020-0697-z

N/A

0DataRank · unranked

15 citations

Deepak Purushotham, Mayank Choudhary, Xiaoyu Zhuo, Changxu Fan, Gavriel Y. Matt +3 more

WashU Epigenome Browser update 2022

Nucleic Acids Research(2022)10.1093/nar/gkac238

N/A

0DataRank · unranked

169 citations

Deepak Purushotham, Jessica K. Harrison, Silas Hsu, Xiaoyu Zhuo, Changxu Fan +8 more

Co-opted transposons help perpetuate conserved higher-order chromosomal structures

Genome biology(2020)10.1186/s13059-019-1916-8

N/A

0DataRank · unranked

102 citations

Ryan Z. Friedman, Julia T. Wang, H. Josh Jang, Xiaoyu Zhuo, Ting Wang +1 more