Vikram S. Shivakumar

Biochemistry, Genetics and Molecular BiologyComputer Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 7 papers. Top paper: “Uncalled4 improves nanopore DNA and RNA modification detection via fast and accurate signal alignment”.

Uncalled4 improves nanopore DNA and RNA modification detection via fast and accurate signal alignment

Nature Methods(2025)10.1038/s41592-025-02631-4

N/A

0.587DataRank · unranked

49 citations

Paul W. Hook, Katharine M. Jenike, Vikram S. Shivakumar, Luke B Morina, Roham Razaghi +3 more

riboviz 2: a flexible and robust ribosome profiling data analysis and visualization workflow

Bioinformatics(2022)10.1093/bioinformatics/btac093

N/A

0.552DataRank · unranked

10 citations

Felicity Anderson, John Favate, Michael Jackson, Amanda Mok, Anna Kurowska +11 more

Improved pangenomic classification accuracy with chain statistics

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.10.29.620953

N/A

0.104DataRank · unranked

1 citations

Vikram S. Shivakumar, Ben Langmead, Nathaniel K. Brown

Partitioned multi-MUM finding for scalable pangenomics with MumemtoM

Genome Research(2025)10.1101/gr.280940.125

N/A

0DataRank · unranked

1 citations

Ben Langmead, Vikram S. Shivakumar

Uncalled4 improves nanopore DNA and RNA modification detection via fast and accurate signal alignment

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.05.583511

N/A

0DataRank · unranked

17 citations

Paul W. Hook, Katharine M. Jenike, Vikram S. Shivakumar, Luke B Morina, Roham Razaghi +3 more

riboviz 2: A flexible and robust ribosome profiling data analysis and visualization workflow

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.14.443910

N/A

0DataRank · unranked

1 citations

Felicity Anderson, John Favate, Michael Jackson, Amanda Mok, Anna Kurowska +10 more

Simulating Protein Structure to Support Clinical Decisions: Predicting the Ligand Specific Impact of Genomic Variation on Opioid Binding

Research Square (Research Square)(2020)10.21203/rs.3.rs-87124/v1

N/A

0DataRank · unranked

0 citations

Whitney Reid, Subha Madhavan, Matthew McCoy, Vikram S. Shivakumar