🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

David Danko

BioScientia (Poland)

ORCID: 0000-0002-1456-9498

Also affiliated with Ekaterinburg State Theatre Institute

Biochemistry, Genetics and Molecular BiologyEnvironmental Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
5.1Author DataRank

Indexed papers

2in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A global metagenomic map of urban microbiomes and antimicrobial resistance

Cell(2021)10.1016/j.cell.2021.05.002
Top 4%
5.1DataRank
Top 4%390 citations

Daniela Bezdan, Evan E. Afshin, Sofia Ahsanuddin, Chandrima Bhattacharya, Daniel Butler +95 more

Papers

Driven by 18 papers — median percentile 48. Top paper: “Shotgun transcriptome, spatial omics, and isothermal profiling of SARS-CoV-2 infection reveals unique host responses, viral diversification, and drug interactions”.

Shotgun transcriptome, spatial omics, and isothermal profiling of SARS-CoV-2 infection reveals unique host responses, viral diversification, and drug interactions

Nature Communications(2021)10.1038/s41467-021-21361-7
N/A
6.5DataRank · unranked
190 citations

Christopher Mozsary, Cem Meydan, Jonathan Foox, Joel Rosiene, Alon Shaiber +74 more

A global metagenomic map of urban microbiomes and antimicrobial resistance

Cell(2021)10.1016/j.cell.2021.05.002
Top 4%
5.1DataRank
Top 4%390 citations

Daniela Bezdan, Evan E. Afshin, Sofia Ahsanuddin, Chandrima Bhattacharya, Daniel Butler +95 more

Shotgun Transcriptome and Isothermal Profiling of SARS-CoV-2 Infection Reveals Unique Host Responses, Viral Diversification, and Drug Interactions

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.20.048066
N/A
5.1DataRank · unranked
96 citations

Christopher Mozsary, Cem Meydan, David Danko, Jonathan Foox, Joel Rosiene +47 more

System-wide transcriptome damage and tissue identity loss in COVID-19 patients

Cell Reports Medicine(2022)10.1016/j.xcrm.2022.100522
N/A
1.2DataRank · unranked
51 citations

Jonathan Foox, Tyler Hether, David Danko, Sarah Warren, Youngmi Kim +43 more

Annotating unknown species of urban microorganisms on a global scale unveils novel functional diversity and local environment association

Environmental Research(2021)10.1016/j.envres.2021.112183
N/A
0.406DataRank · unranked
14 citations

David Danko, Ebrahim Afshinnekoo, Daniela Bezdan, Malay Bhattacharyya, Eduardo Castro‐Nallar +28 more

Blackbird: structural variant detection using synthetic and low-coverage long-reads

Bioinformatics Advances(2024)10.1093/bioadv/vbaf151
N/A
0.104DataRank · unranked
1 citations

Rui Yang, Salil Maharjan, David Danko, Anton Korobeynikov, Iman Hajirasouliha +1 more

Epsilon toxin–producing Clostridium perfringens colonize the multiple sclerosis gut microbiome overcoming CNS immune privilege

Journal of Clinical Investigation(2023)10.1172/jci163239
N/A
0DataRank · unranked
48 citations

David R. Sannino, Jennifer R. Linden, Sylvia Haigh, Baohua Zhao, John B. Grigg +28 more

Ariadne: synthetic long read deconvolution using assembly graphs

Genome biology(2023)10.1186/s13059-023-03033-5
N/A
0DataRank · unranked
5 citations

Dmitry Meleshko, David Danko, Waris N. Barakzai, Salil Maharjan, Natan Belchikov +2 more

CAMP: A modular metagenomics analysis system for integrated multi-step data exploration

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.09.536171
N/A
0DataRank · unranked
1 citations

Braden Tierney, Wei Wei, Cynthia Ronkowski, Rodolfo Brizola Toscan, Berk Turhan +25 more

Blackbird: structural variant detection using synthetic and low-coverage long-reads

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.11.17.624011
N/A
0DataRank · unranked
0 citations

Rui Yang, Salil Maharajan, David Danko, Anton Korobeynikov, Iman Hajirasouliha +1 more

The Microbe Directory: a centralized database for biological interpretation of microbiome data

Database(2025)10.1093/database/baaf060
Top 100%
0DataRank
Top 100%0 citations

Krista Ryon, Mohith Reddy Arikatla, Radwa Elshafey, Hardik Bhaskar, Jacqueline Proszynski +8 more

Obesity and ethnicity alter gene expression in skin

Scientific Reports(2020)10.1038/s41598-020-70244-2
N/A
0DataRank · unranked
22 citations

Sandra Garcet, José O. Alemán, Christopher E. Mason, David Danko, Daniel Butler +6 more

CAMP: a modular metagenomics analysis system for integrated multistep data exploration

NAR Genomics and Bioinformatics(2025)10.1093/nargab/lqaf172
N/A
0DataRank · unranked
0 citations

Braden Tierney, Wei Wei, Cynthia Ronkowski, Rodolfo Brizola Toscan, Berk Turhan +95 more

Obesity and Race Alter Gene Expression in Skin

medRxiv(2020)10.1101/2020.06.02.20120469
N/A
0DataRank · unranked
0 citations

Sandra Garcet, José O. Alemán, Christopher E. Mason, David Danko, Simone Zuffa +5 more

Characterization of the public transit air microbiome and resistome reveals geographical specificity

Microbiome(2021)10.1186/s40168-021-01044-7
N/A
0DataRank · unranked
73 citations

X. Tong, Kari Oline Bøifot, Daniela Bezdan, Daniel Butler, David Danko +14 more

A comprehensive metagenomics framework to characterize organisms relevant for planetary protection

Microbiome(2021)10.1186/s40168-021-01020-1
N/A
0DataRank · unranked
32 citations

Maria A. Sierra, James N. Benardini, Lisa Guan, Jason M. Wood, Nitin K. Singh +9 more

Characterization of Spacesuit Associated Microbial Communities and Their Implications for NASA Missions

Frontiers in Microbiology(2021)10.3389/fmicb.2021.608478
N/A
0DataRank · unranked
17 citations

Ganesh Babu Malli Mohan, Maria A. Sierra, Michelle A. Rucker, Nitin K. Singh, A. B. Regberg +6 more

Ozone Disinfection for Elimination of Bacteria and Degradation of SARS-CoV2 RNA for Medical Environments

Genes(2022)10.3390/genes14010085
N/A
0DataRank · unranked
22 citations

Savlatjon Rahmatulloev, David Danko, Evan E. Afshin, Niamh B. O’Hara, Rachid Ounit +3 more