Jonathan E. Rubin

Also affiliated with Center for the Neural Basis of Cognition, Carnegie Mellon University

NeurosciencePhysics and AstronomyComputer ScienceMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 24 papers. Top paper: “Neural activity during a simple reaching task in macaques is counter to gating and rebound in basal ganglia–thalamic communication”.

Neural activity during a simple reaching task in macaques is counter to gating and rebound in basal ganglia–thalamic communication

PLoS Biology(2020)10.1371/journal.pbio.3000829

N/A

0.998DataRank · unranked

41 citations

Daisuke Kase, Andrew J. Zimnik, Robert Rosenbaum, Marcello G. Codianni, Jonathan E. Rubin +2 more

The effects of chloride dynamics on substantia nigra pars reticulata responses to pallidal and striatal inputs

eLife(2020)10.7554/elife.55592

N/A

0.763DataRank · unranked

29 citations

Ian Rosner, Aryn H. Gittis, Jonathan E. Rubin, Ryan S. Phillips

Arkypallidal neurons in the external globus pallidus can mediate inhibitory control by altering competition in the striatum

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2408505121

N/A

0.345DataRank · unranked

9 citations

Jyotika Bahuguna, Jonathan E. Rubin, Timothy Verstynen, Catalina Vich, Cristina Giossi

A novel mechanism for ramping bursts based on slow negative feedback in model respiratory neurons

Chaos An Interdisciplinary Journal of Nonlinear Science(2024)10.1063/5.0201472

N/A

0.292DataRank · unranked

6 citations

Ryan S. Phillips, Jonathan E. Rubin, Sushmita Rose John

Rethinking the external globus pallidus and information flow in cortico-basal ganglia-thalamic circuits

PubMed(2024)10.22541/au.171298690.06353768/v1

N/A

0.269DataRank · unranked

5 citations

Jonathan E. Rubin, Aryn H. Gittis, Timothy Verstynen, Catalina Vich, Cristina Giossi

Transmission of delta band (0.5-4 Hz) oscillations from the globus pallidus to the substantia nigra pars reticulata in dopamine depletion

Journal of Computational Neuroscience(2023)10.1007/s10827-023-00853-z

N/A

0.241DataRank · unranked

4 citations

John E. Parker, Aryn H. Gittis, Jonathan E. Rubin, Timothy C. Whalen

Modular architecture and resilience of structural covariance networks in first-episode antipsychotic-naive psychoses

Research Square(2022)10.21203/rs.3.rs-2285652/v1

N/A

0.104DataRank · unranked

1 citations

Tales Santini, Nicholas Theis, Brendan Muldoon, Katherine Dash, Jonathan E. Rubin +3 more

CBGTPy: An extensible cortico-basal ganglia-thalamic framework for modeling biological decision making

PLoS ONE(2025)10.1371/journal.pone.0310367

N/A

0.104DataRank · unranked

1 citations

Jyotika Bahuguna, Cristina Giossi, Jonathan E. Rubin, Timothy Verstynen, Catalina Vich +1 more

Exploring the role of the Kölliker–Fuse nucleus in breathing variability by mathematical modelling

The Journal of Physiology(2023)10.1113/jp285158

N/A

0DataRank · unranked

3 citations

William H. Barnett, Ana P. Abdala, Daniel B. Zoccal, Jonathan E. Rubin, Yaroslav I. Molkov +1 more

Competing neural representations of choice shape evidence accumulation in humans

eLife(2023)10.7554/elife.85223

N/A

0DataRank · unranked

5 citations

Javier Rasero, Raghav Madan, Jyotika Bahuguna, Jonathan E. Rubin, Timothy Verstynen +1 more

Introducing the STReaC (Spike Train Response Classification) toolbox

Journal of Neuroscience Methods(2023)10.1016/j.jneumeth.2023.110000

N/A

0DataRank · unranked

2 citations

Asier Aristieta, Aryn H. Gittis, Jonathan E. Rubin, John E. Parker

CBGTPy: An extensible cortico-basal ganglia-thalamic framework for modeling biological decision making

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.05.556301

N/A

0DataRank · unranked

5 citations

Jyotika Bahuguna, Cristina Giossi, Jonathan E. Rubin, Timothy Verstynen, Catalina Vich +1 more

Rethinking the external globus pallidus and information flow in cortico‐basal ganglia‐thalamic circuits

European Journal of Neuroscience(2024)10.1111/ejn.16348

N/A

0DataRank · unranked

16 citations

Jonathan E. Rubin, Aryn H. Gittis, Timothy Verstynen, Catalina Vich, Cristina Giossi

Dopamine depletion weakens direct pathway modulation of SNr neurons

Neurobiology of Disease(2024)10.1016/j.nbd.2024.106512

N/A

0DataRank · unranked

14 citations

John E. Parker, Ya Gao, Jonathan E. Rubin, Aryn H. Gittis, Asier Aristieta

Calculation of Expected Reward Rate in a Two-Alternative Decision Process

SIAM Journal on Applied Mathematics(2025)10.1137/23m1577110

N/A

0DataRank · unranked

1 citations

Jonathan E. Rubin, Baram Sosis

A Nonlinear Map Describing Relaxation to Cluster States in an Adapting Neuronal Network

SIAM Journal on Applied Dynamical Systems(2025)10.1137/24m1695622

N/A

0DataRank · unranked

0 citations

G. Bard Ermentrout, Jonathan E. Rubin, Kai-Ming Tse

Distinct dopaminergic spike-timing-dependent plasticity rules are suited to different functional roles

Research Square(2025)10.21203/rs.3.rs-7456628/v1

N/A

0DataRank · unranked

0 citations

Jonathan E. Rubin, Baram Sosis

Delta Oscillations Are a Robust Biomarker of Dopamine Depletion Severity and Motor Dysfunction in Awake Mice

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.09.941161

N/A

0DataRank · unranked

4 citations

Amanda M Willard, Jonathan E. Rubin, Aryn H. Gittis, Timothy C. Whalen

A computational model explains and predicts substantia nigra pars reticulata responses to pallidal and striatal inputs

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.17.952820

N/A

0DataRank · unranked

2 citations

Ian Rosner, Aryn H. Gittis, Jonathan E. Rubin, Ryan S. Phillips

Predictions and experimental tests of a new biophysical model of the mammalian respiratory oscillator

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.29.466442

N/A

0DataRank · unranked

2 citations

Hidehiko Koizumi, Yaroslav I. Molkov, Jonathan E. Rubin, Jeffrey C. Smith, Ryan S. Phillips

Identifying control ensembles for information processing within the cortico-basal ganglia-thalamic circuit

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.22.473901

N/A

0DataRank · unranked

0 citations

Matthew Clapp, Timothy Verstynen, Jonathan E. Rubin, Catalina Vich

Identifying control ensembles for information processing within the cortico-basal ganglia-thalamic circuit

PLoS Computational Biology(2022)10.1371/journal.pcbi.1010255

N/A

0DataRank · unranked

17 citations

Matthew Clapp, Jonathan E. Rubin, Timothy Verstynen, Catalina Vich

Predictions and experimental tests of a new biophysical model of the mammalian respiratory oscillator

eLife(2022)10.7554/elife.74762

N/A

0DataRank · unranked

13 citations

Hidehiko Koizumi, Yaroslav I. Molkov, Jonathan E. Rubin, Jeffrey C. Smith, Ryan S. Phillips

Modular architecture and resilience of structural covariance networks in first-episode antipsychotic-naive psychoses

Scientific Reports(2023)10.1038/s41598-023-34210-y

N/A

0DataRank · unranked

5 citations

Tales Santini, Nicholas Theis, Brendan Muldoon, Katherine Dash, Jonathan E. Rubin +3 more