Elodie Ghedin

Also affiliated with National Institute of Allergy and Infectious Diseases

MedicineAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 4%percentile

0.699Author DataRank

Indexed papers

2in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Nearly Complete Genome Sequence of Brugia malayi Strain FR3

Microbiology Resource Announcements(2020)10.1128/mra.00154-20

Top 29%

0.699DataRank

Top 29%21 citations

Jeremy M. Foster, Michael Paulini, Alexandra Grote, John Mattick, Yu-Chih Tsai +15 more

Papers

Driven by 59 papers — median percentile 71. Top paper: “Defining the risk of SARS-CoV-2 variants on immune protection”.

Defining the risk of SARS-CoV-2 variants on immune protection

Nature(2022)10.1038/s41586-022-04690-5

N/A

4.9DataRank · unranked

185 citations

Elodie Ghedin, Matthew B. Frieman, Florian Krammer, Alba Grifoni, Arghavan Alisoltani +95 more

Clinical, Virologic, and Immunologic Evaluation of Symptomatic Coronavirus Disease 2019 Rebound Following Nirmatrelvir/Ritonavir Treatment

Clinical Infectious Diseases(2022)10.1093/cid/ciac663

N/A

2.9DataRank · unranked

52 citations

Joseph M. Rocco, Kristin L. Boswell, Elizabeth Laidlaw, Frances Galindo, Anela Kellogg +17 more

Sex chromosome evolution in parasitic nematodes of humans

Nature Communications(2020)10.1038/s41467-020-15654-6

N/A

1.6DataRank · unranked

52 citations

Alexandra Grote, John Mattick, Alan Tracey, Yu‐Chih Tsai, Matthew Chung +18 more

Emergence of transmissible SARS-CoV-2 variants with decreased sensitivity to antivirals in immunocompromised patients with persistent infections

Nature Communications(2024)10.1038/s41467-024-51924-3

N/A

1.2DataRank · unranked

49 citations

Katherine Johnson, Ruchi Rani, Eli J. Finkelsztein, Leonardo C. Caserta, Rosy Priya Kodiyanplakkal +13 more

Microbial signatures in the lower airways of mechanically ventilated COVID-19 patients associated with poor clinical outcome

Nature Microbiology(2021)10.1038/s41564-021-00961-5

N/A

0.792DataRank · unranked

196 citations

Matthew Chung, Luis F. Angel, Jun-Chieh J. Tsay, Benjamin G. Wu, Stephen T. Yeung +47 more

Myxoma Virus and the Leporipoxviruses: An Evolutionary Paradigm

Viruses(2015)10.3390/v7031020

N/A

0.709DataRank · unranked

112 citations

June Liu, Isabella Cattadori, Elodie Ghedin, Andrew Read, Edward C. Holmes +1 more

Nearly Complete Genome Sequence of Brugia malayi Strain FR3

Microbiology Resource Announcements(2020)10.1128/mra.00154-20

Top 29%

0.699DataRank

Top 29%21 citations

Jeremy M. Foster, Michael Paulini, Alexandra Grote, John Mattick, Yu-Chih Tsai +15 more

An early warning system for emerging SARS-CoV-2 variants

Nature Medicine(2022)10.1038/s41591-022-01836-w

N/A

0.680DataRank · unranked

92 citations

Anne von Gottberg, Lipi Thukral, Nathalie Worp, Bas B. Oude Munnink, Surabhi Rathore +56 more

Characterization of antibiotic resistance and host-microbiome interactions in the human upper respiratory tract during influenza infection

Microbiome(2020)10.1186/s40168-020-00803-2

N/A

0.665DataRank · unranked

83 citations

Christian V. Forst, Aubree Gordon, Gabrielle Gussin, Adam Geber, Porfirio J. Fernandez +8 more

An updated framework for SARS-CoV-2 variants reflects the unpredictability of viral evolution

Nature Medicine(2024)10.1038/s41591-024-02949-0

N/A

0.500DataRank · unranked

27 citations

James R. Otieno, Nathalie Worp, Homa Attar Cohen, Bas B. Oude Munnink, Laith J. Abu‐Raddad +53 more

Microbial signatures in the lower airways of mechanically ventilated COVID19 patients associated with poor clinical outcome

medRxiv(2021)10.1101/2021.02.23.21252221

N/A

0.457DataRank · unranked

20 citations

Matthew Chung, Luis F. Angel, Jun-Chieh J. Tsay, Benjamin G. Wu, Stephen T. Yeung +47 more

COVID-19 redux: clinical, virologic, and immunologic evaluation of clinical rebound after nirmatrelvir/ritonavir

medRxiv(2022)10.1101/2022.06.16.22276392

N/A

0.373DataRank · unranked

11 citations

Joseph M. Rocco, Kristin L. Boswell, Elizabeth Laidlaw, Frances Galindo, Anela Kellogg +17 more

Influenza Defective Interfering Virus Promotes Multiciliated Cell Differentiation and Reduces the Inflammatory Response in Mice

Journal of Virology(2023)10.1128/jvi.00493-23

N/A

0.373DataRank · unranked

11 citations

Rebekah Honce, Mirella Salvatore, Daniela Chow, Davide Randazzo, Jianjun Yang +5 more

Host obesity impacts genetic variation in influenza A viral populations

Journal of Virology(2024)10.1128/jvi.01778-23

N/A

0.350DataRank · unranked

6 citations

Rebekah Honce, Victoria Meliopoulos, Ernesto Segredo-Otero, Katherine Johnson, Stacey Schultz‐Cherry +3 more

Genomic approach to determine sources of neonatal Staphylococcus aureus infection from carriage in the Gambia

BMC Infectious Diseases(2024)10.1186/s12879-024-09837-5

N/A

0.338DataRank · unranked

6 citations

Matthew Wai Heng Chung, Bully Camara, Isatou Jagne, Romain Guérillot, Ebrahim Ndure +4 more

MicroRNAs secreted by the parasitic nematode Brugia malayi disrupt lymphatic endothelial cell integrity

PLoS neglected tropical diseases(2024)10.1371/journal.pntd.0012803

N/A

0.277DataRank · unranked

4 citations

Stephanie Banakis, Matthew Chung, Elodie Ghedin, Denis Voronin, Hailey Johnson

Glycomic analysis of host-response reveals high mannose as a key mediator of influenza severity

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.21.054098

N/A

0.241DataRank · unranked

4 citations

Sujeethraj Koppolu, Yue Zhang, Brian Kasper, Lawrence Meche, Christopher A. Vaiana +11 more

US National Institutes of Health Prioritization of SARS-CoV-2 Variants

Emerging infectious diseases(2023)10.3201/eid2905.221646

N/A

0.208DataRank · unranked

3 citations

Arghavan Alisoltani, Debbie Bratt, Liel Cohen-Lavi, Bethany L. Dearlove, Christian Drosten +29 more

Host obesity impacts genetic variation in influenza A viral populations

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.12.548715

N/A

0.165DataRank · unranked

2 citations

Rebekah Honce, Victoria Meliopoulos, Stacey Schultz‐Cherry, Elodie Ghedin, David Gresham +1 more

The microbiome of Total Suspended Particles and its influence on the respiratory microbiome of healthy office workers

Ecotoxicology and Environmental Safety(2025)10.1016/j.ecoenv.2025.117874

N/A

0.165DataRank · unranked

2 citations

Sabrina Rovelli, Simona Iodice, Matthew Chung, Michael Frimpong, Valentina Bollati +3 more

Evaluation of determinants of the serological response to the quadrivalent split‐inactivated influenza vaccine

Molecular Systems Biology(2022)10.15252/msb.202110724

N/A

0DataRank · unranked

23 citations

Ted M. Ross, Michael A. Carlock, Elodie Ghedin, Hyungwon Choi, Christine Vogel +1 more

Within-host genetic diversity of SARS-CoV-2 in the context of large-scale hospital-associated genomic surveillance

medRxiv(2022)10.1101/2022.08.17.22278898

N/A

0DataRank · unranked

5 citations

S. Wesley Long, Randall J. Olsen, Paul James Christensen, Sishir Subedi, Matthew Chung +4 more

Miniature spatial transcriptomics for studying parasite-endosymbiont relationships at the micro scale

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.23.517653

N/A

0DataRank · unranked

2 citations

Denis Voronin, Yuvarani Masarapu, Matthew Chung, Sami Saarenpää, Elodie Ghedin +2 more

Predicting seasonal influenza vaccine response using systemic gene expression profiling

medRxiv(2022)10.1101/2022.06.15.22276462

N/A

0DataRank · unranked

0 citations

Matthew Wai Heng Chung, Megan Hockman, Lauren Lashua, Emily M. Adney, Michael A. Carlock +4 more

CRISPR arrays as high-resolution markers to track microbial transmission during influenza infection

medRxiv(2022)10.1101/2022.08.11.22278625

N/A

0DataRank · unranked

0 citations

Jahan Rahman, Lauren Lashua, Aubree Gordon, Ángel Balmaseda, Guillermina Kuan +3 more

Lower Airway Dysbiosis Augments Lung Inflammatory Injury in Mild-to-Moderate Chronic Obstructive Pulmonary Disease

American Journal of Respiratory and Critical Care Medicine(2023)10.1164/rccm.202210-1865oc

N/A

0DataRank · unranked

45 citations

Benjamin G. Wu, Matthew Chung, Bradley Isaacs, Jun-Chieh J. Tsay, Meredith Holub +25 more

Influenza A virus reassortment is strain dependent

PLoS Pathogens(2023)10.1371/journal.ppat.1011155

N/A

0DataRank · unranked

32 citations

Ilechukwu Agu, Ivy R. José, Sari Mäntynen, A. J. Campbell, Courtney Mattson +6 more

Optimized quantification of intra-host viral diversity in SARS-CoV-2 and influenza virus sequence data

mBio(2023)10.1128/mbio.01046-23

N/A

0DataRank · unranked

21 citations

Katherine Johnson, Maximilian Knoll, Malik Khalfan, Bei Wang, Stacey Schultz‐Cherry +16 more

Wolbachia interferes with Zika virus replication by hijacking cholesterol metabolism in mosquito cells

Microbiology Spectrum(2023)10.1128/spectrum.02180-23

N/A

0DataRank · unranked

18 citations

Elodie Ghedin, Denis Voronin, Brent Edwards

Evaluation of determinants of the serological response to the split-inactivated influenza vaccine

medRxiv(2021)10.1101/2021.10.07.21264416

N/A

0DataRank · unranked

0 citations

Ted M. Ross, Michael A. Carlock, Elodie Ghedin, Hyungwon Choi, Christine Vogel +1 more

Successful lung transplantation using an allograft from a COVID-19–recovered donor: a potential role for subgenomic RNA to guide organ utilization

American Journal of Transplantation(2023)10.1016/j.ajt.2022.09.001

N/A

0DataRank · unranked

9 citations

Sabrina Ramelli, Sydney Stein, Allison Roder, Allie Kreitman, Stephanie Banakis +15 more

CRISPR arrays as high-resolution markers to track microbial transmission during influenza infection

Microbiome(2023)10.1186/s40168-023-01568-0

N/A

0DataRank · unranked

5 citations

Jahan Rahman, Matthew Chung, Lauren Lashua, Aubree Gordon, Ángel Balmaseda +4 more

Tracking the emergence of antigenic variants in influenza A virus epidemics in Brazil

Virus Evolution(2023)10.1093/ve/vead027

N/A

0DataRank · unranked

7 citations

Katherine Johnson, Timothy Song, Tatiana Schäffer Gregianini, Baccin Tatiana G., Guojun Wang +7 more

Miniature spatial transcriptomics for studying parasite-endosymbiont relationships at the micro scale

Nature Communications(2023)10.1038/s41467-023-42237-y

N/A

0DataRank · unranked

6 citations

Denis Voronin, Yuvarani Masarapu, Matthew Chung, Sami Saarenpää, Elodie Ghedin +2 more

Sex disparities in influenza: a multiscale network analysis

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.25.437108

N/A

0DataRank · unranked

1 citations

Lauren Lashua, Chalise E. Carter, Scott K. Johnson, Minghui Wang, Ted M. Ross +4 more

Bordetella bronchiseptica-Mediated Interference Prevents Influenza A Virus Replication in the Murine Nasal Cavity

Microbiology Spectrum(2023)10.1128/spectrum.04735-22

N/A

0DataRank · unranked

2 citations

Illiassou Hamidou Soumana, Katie L. Reagin, Preston Dihle, Elodie Ghedin, Kimberly D. Klonowski +3 more

Sex-specific glycosylation of secreted immunomodulatory proteins in the filarial nematode Brugia malayi

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.24.432741

N/A

0DataRank · unranked

2 citations

Burcu Vitrinel, Peter Whitney, Brian Kasper, Lara K. Mahal, Christine Vogel +4 more

The impact of SARS-CoV-2 variants on the likelihood of children identified as sources of infection in the NIH workforce: a cohort study

medRxiv(2023)10.1101/2023.11.07.23297422

N/A

0DataRank · unranked

0 citations

Heike Bailin, Michael R. Bell, Jessica McCormick-Ell, Sanchita Basu Das, Allison Roder +6 more

New Proteomic Signatures to Distinguish Between Zika and Dengue Infections

Molecular & Cellular Proteomics(2021)10.1016/j.mcpro.2021.100052

N/A

0DataRank · unranked

17 citations

Shuvadeep Maity, Alice Zhao, Lauren Lashua, Moti Ramgopal, B. Balkaran +8 more

Yearlong COVID-19 Infection Reveals Within-Host Evolution of SARS-CoV-2 in a Patient With B-Cell Depletion

The Journal of Infectious Diseases(2021)10.1093/infdis/jiab622

N/A

0DataRank · unranked

93 citations

Allison Roder, Sanchita Basu Das, Emmie de Wit, Jung-Ho Youn, Stephanie Banakis +10 more

CD4 + and CD8 + T cells are required to prevent SARS-CoV-2 persistence in the nasal compartment

Science Advances(2024)10.1126/sciadv.adp2636

N/A

0DataRank · unranked

19 citations

Katherine Johnson, Abigail Vanderheiden, Elizabeth J. Elrod, Katharine Floyd, Elizabeth Geerling +14 more

Repurposed Drugs That Activate Autophagy in Filarial Worms Act as Effective Macrofilaricides

Pharmaceutics(2024)10.3390/pharmaceutics16020256

N/A

0DataRank · unranked

4 citations

Nancy Tricoche, Ricardo Peguero, Anna Kamińska, Elodie Ghedin, Judy A. Sakanari +2 more

Age-dependent glycomic response to the 2009 pandemic H1N1 influenza virus and its association with disease severity

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.22.165613

N/A

0DataRank · unranked

1 citations

Brian Kasper, Bin Zhang, Lauren Lashua, Ted M. Ross, Elodie Ghedin +2 more

CRISPR-mediated Transfection of Brugia malayi

PLoS neglected tropical diseases(2020)10.1371/journal.pntd.0008627

N/A

0DataRank · unranked

35 citations

Alexandra Grote, Elodie Ghedin, Thomas R. Unnasch, Canhui Liu

Modeling the metabolic interplay between a parasitic worm and its bacterial endosymbiont allows the identification of novel drug targets

eLife(2020)10.7554/elife.51850

N/A

0DataRank · unranked

26 citations

Alexandra Grote, Nirvana Nursimulu, Adam Geber, Denis Voronin, Drew R. Jones +3 more

Genomic analysis of the early COVID-19 pandemic in Haiti reveals Caribbean-specific variant dynamics

PLOS Global Public Health(2024)10.1371/journal.pgph.0003536

N/A

0DataRank · unranked

1 citations

Allie Kreitman, Martha I. Nelson, Matthew Chung, Christopher Mederos, Allison Roder +13 more

Patient subtyping analysis of baseline multi-omic data reveals distinct pre-immune states associated with antibody response to seasonal influenza vaccination

Clinical Immunology(2024)10.1016/j.clim.2024.110333

N/A

0DataRank · unranked

4 citations

Christian V. Forst, Drew R. Jones, David Gresham, Smruti Pushalkar, Shaohuan Wu +7 more

Vaccine-induced NA immunity decreases viral shedding, but does not disrupt chains of airborne transmission for the 2009 pandemic H1N1 virus in ferrets

mBio(2024)10.1128/mbio.02161-24

N/A

0DataRank · unranked

3 citations

Talia A. Heinly, Derek G. Sim, Dolly Patel, Allison Roder, Wei Wang +5 more

CD4+ and CD8+ T cells are required to prevent SARS-CoV-2 persistence in the nasal compartment

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.23.576505

N/A

0DataRank · unranked

2 citations

Katherine Johnson, Abigail Vanderheiden, Elizabeth J. Elrod, Katharine Floyd, Elizabeth Geerling +14 more

The microbiome of Total Suspended Particles (TSP) and its influence on the respiratory microbiome of healthy office workers

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.08.12.607611

N/A

0DataRank · unranked

1 citations

Sabrina Rovelli, Simona Iodice, Matthew Chung, Michael Frimpong, Valentina Bollati +3 more

Patient Subtyping Analysis of Baseline Multi-omic Data Reveals Distinct Pre-immune States Predictive of Vaccination Responses

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.18.576213

N/A

0DataRank · unranked

0 citations

Christian V. Forst, Drew R. Jones, David Gresham, Smruti Pushalkar, Shaohuan Wu +7 more

Impaired immune responses in the airways are associated with poor outcome in critically ill COVID-19 patients

ERJ Open Research(2024)10.1183/23120541.00789-2023

N/A

0DataRank · unranked

0 citations

K. Krolikowski, Radu Postelnicu, Vikramjit Mukherjee, Imran Sulaiman, Matthew Chung +22 more

Emergence of transmissible SARS-CoV-2 variants with decreased sensitivity to antivirals in immunocompromised patients with persistent infections

medRxiv(2024)10.1101/2024.06.14.24308523

N/A

0DataRank · unranked

0 citations

Katherine Johnson, Ruchi Rani, Eli J. Finkelsztein, Leonardo C. Caserta, Rosy Priya Kodiyanplakkal +13 more

Defining the risk of SARS-CoV-2 variants on immune protection

UNC Libraries(2024)10.17615/ztqb-8n94

N/A

0DataRank · unranked

0 citations

Boritz E.A., Sinai Sacharen, VanBlargan L.A., Liebeskind M.J., Wei Wang +95 more

Prediction pipeline for discovery of regulatory motifs associated with Brugia malayi molting

PLoS neglected tropical diseases(2020)10.1371/journal.pntd.0008275

N/A

0DataRank · unranked

75 citations

Yichao Li, Canhui Liu, Denis Voronin, Adam Geber, Sara Lustigman +4 more

Longitudinal humoral immunity against SARS-CoV-2 Spike following infection in individuals from Cameroon

Virology(2025)10.1016/j.virol.2025.110467

N/A

0DataRank · unranked

1 citations

Dell-Dylan Kenfack, Katrina Dionne, Maxime Côté-Chenette, Guillaume Beaudoin-Bussières, Étienne Bélanger +10 more

Obese individuals exhibit distinct temporal gene expression dynamics in response to influenza vaccination

Microbiology Spectrum(2025)10.1128/spectrum.03354-24

N/A

0DataRank · unranked

0 citations

Julia Matthews, Michael A. Carlock, Ted M. Ross, David Gresham, Elodie Ghedin +1 more

SurfDiff: protein surface profiling for selective or broadly reactive epitope prioritisation in binder and immunogen design

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.64898/2025.12.23.696170

N/A

0DataRank · unranked

0 citations

Oliver Wissett, Tung Nguyen, Elodie Ghedin, Pietro Sormanni, Benedikt Jedlitzke

Sex disparities in influenza: A multiscale network analysis

iScience(2022)10.1016/j.isci.2022.104192

N/A

0DataRank · unranked

19 citations

Lauren Lashua, Chalise E. Carter, Scott K. Johnson, Minghui Wang, Ted M. Ross +4 more

Elodie Ghedin

Indexed papers

Top data-sharing exemplar

Papers