🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Jeanne Shen

Stanford University

ORCID: 0000-0002-1519-0308
MedicineComputer ScienceImmunology and MicrobiologyBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile
0Author DataRank

Indexed papers

1in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

STARC-9: A Large-scale Dataset for Multi-Class Tissue Classification for CRC Histopathology

arXiv (Cornell University)(2025)10.48550/arxiv.2511.00383
Top 100%
0DataRank
Top 100%0 citations

Rathinaraja Jeyaraj, Maxim Peterson, Terry N. Guo, Richard H. Scheuermann, Curtis P. Langlotz +3 more

Papers

Driven by 20 papers — median percentile 0. Top paper: “Single-cell analyses define a continuum of cell state and composition changes in the malignant transformation of polyps to colorectal cancer”.

Single-cell analyses define a continuum of cell state and composition changes in the malignant transformation of polyps to colorectal cancer

Nature Genetics(2022)10.1038/s41588-022-01088-x
N/A
7.5DataRank · unranked
331 citations

Stephanie Nevins, Derek C. Chen, Roxanne Chiu, Aaron M. Horning, Tuhin K. Guha +13 more

A spatial map of human macrophage niches reveals context-dependent macrophage functions in colon and breast cancer.

Research Square(2023)10.21203/rs.3.rs-2393443/v1
N/A
0.852DataRank · unranked
23 citations

John W. Hickey, Bogdan Luca, Guolan Lu, Łukasz Kidziński, Shirley Zhu +10 more

Global loss of promoter–enhancer connectivity and rebalancing of gene expression during early colorectal cancer carcinogenesis

Nature Cancer(2024)10.1038/s43018-024-00823-z
N/A
0.457DataRank · unranked
20 citations

Hayan Lee, Shannon White, Annika K. Weimer, Emma Monte, Aaron M. Horning +21 more

Multiomic analysis of familial adenomatous polyposis reveals molecular pathways associated with early tumorigenesis

Nature Cancer(2024)10.1038/s43018-024-00831-z
N/A
0.416DataRank · unranked
15 citations

Casey Hanson, Si Wu, Aaron M. Horning, Nasim Barapour, Stephanie Nevins +30 more

Prediction of immunotherapy response using mutations to cancer protein assemblies

Science Advances(2024)10.1126/sciadv.ado9746
N/A
0.345DataRank · unranked
9 citations

Xiaoyu Zhao, Akshat Singhal, Sungjoon Park, Robin E. Bachelder, Jeanne Shen +7 more

Multi-omic Analysis of Familial Adenomatous Polyposis Reveals Molecular Pathways and Polyclonal Spreading Associated with Early Tumorigenesis

Research Square(2021)10.21203/rs.3.rs-515393/v1
N/A
0.165DataRank · unranked
2 citations

Aaron M. Horning, Edward D. Esplin, Si Wu, Casey Hanson, Nasim Bararpour +27 more

Evaluating Vision and Pathology Foundation Models for Computational Pathology: A Comprehensive Benchmark Study

Research Square(2025)10.21203/rs.3.rs-6823810/v1
N/A
0.117DataRank · unranked
1 citations

Rohan Bareja, Francisco Carrillo-Perez, Yuanning Zheng, Marija Pizurica, Tarak Nandi +4 more

STARC-9: A Large-scale Dataset for Multi-Class Tissue Classification for CRC Histopathology

arXiv (Cornell University)(2025)10.48550/arxiv.2511.00383
Top 100%
0DataRank
Top 100%0 citations

Rathinaraja Jeyaraj, Maxim Peterson, Terry N. Guo, Richard H. Scheuermann, Curtis P. Langlotz +3 more

Global loss of fine-scale chromatin architecture and rebalancing of gene expression during early colorectal cancer development

Research Square(2022)10.21203/rs.3.rs-2003187/v1
N/A
0DataRank · unranked
0 citations

Yizhou Zhu, Hayan Lee, Annika K. Weimer, Aaron M. Horning, Stephanie Nevins +17 more

Synthetic whole-slide image tile generation with gene expression profile-infused deep generative models

Cell Reports Methods(2023)10.1016/j.crmeth.2023.100534
N/A
0DataRank · unranked
16 citations

Marija Pizurica, Michael G. Ozawa, Hannes Vogel, Robert B. West, Christina S. Kong +4 more

RNA-to-image multi-cancer synthesis using cascaded diffusion models

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.13.523899
N/A
0DataRank · unranked
5 citations

Marija Pizurica, Yuanning Zheng, Tarak Nandi, Ravi Madduri, Jeanne Shen +2 more

Spatially Segregated Macrophage Populations Predict Distinct Outcomes in Colon Cancer

Cancer Discovery(2024)10.1158/2159-8290.cd-23-1300
N/A
0DataRank · unranked
148 citations

John W. Hickey, David G.P. van IJzendoorn, Guolan Lu, Łukasz Kidziński, Shirley Zhu +13 more

Inflamed immune phenotype predicts favorable clinical outcomes of immune checkpoint inhibitor therapy across multiple cancer types

Journal for ImmunoTherapy of Cancer(2024)10.1136/jitc-2023-008339
N/A
0DataRank · unranked
53 citations

Yoon-La Choi, Taebum Lee, Hyojin Kim, Young Kwang Chae, Ben W. Dulken +25 more

Global loss of promoter-enhancer connectivity and rebalancing of gene expression during early colorectal cancer carcinogenesis

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.26.505505
N/A
0DataRank · unranked
1 citations

Hayan Lee, Shannon White, Annika K. Weimer, Emma Monte, Aaron Horning +21 more

Enteric Glia Play a Critical Role in Promoting the Development of Colorectal Cancer

Frontiers in Oncology(2020)10.3389/fonc.2020.595892
N/A
0DataRank · unranked
43 citations

Nupur Bhattacharya, Justin A. Kenkel, Jeanne Shen, Michael DiMaio, Sreya Bagchi +4 more

Hispanic/Latino Patients with Gastric Adenocarcinoma Have Distinct Molecular Profiles Including a High Rate of Germline CDH1 Variants

Cancer Research(2020)10.1158/0008-5472.can-19-2918
N/A
0DataRank · unranked
40 citations

Yunku Yeu, Suntrea T.G. Hammer, Shu Xiao, Hao Zhu, Changjin Hong +11 more

Single-cell analyses reveal a continuum of cell state and composition changes in the malignant transformation of polyps to colorectal cancer

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.24.436532
N/A
0DataRank · unranked
12 citations

Stephanie Nevins, Derek C. Chen, Roxanne Chiu, Aaron M. Horning, Rozelle Laquindanum +12 more

AI-enabled in silico immunohistochemical characterization for Alzheimer's disease

Cell Reports Methods(2022)10.1016/j.crmeth.2022.100191
N/A
0DataRank · unranked
26 citations

Syed Bukhari, Edward Fox, Abubakar Abid, Jeanne Shen, Claudia H. Kawas +4 more

A spatial map of human macrophage niches links tissue location with function

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.18.504434
N/A
0DataRank · unranked
11 citations

John W. Hickey, Bogdan Luca, Guolan Lu, Łukasz Kidziński, Shirley Shu +10 more

Distinct cell states define the developmental trajectories of mucinous appendiceal neoplasms towards pseudomyxoma metastases

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.26.493618
N/A
0DataRank · unranked
1 citations

Anuja Sathe, Xiangqi Bai, Susan M. Grimes, Jeanne Shen, George A. Poultsides +3 more