William E. Fondrie

ChemistryBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 10 papers. Top paper: “mokapot: Fast and flexible semi-supervised learning for peptide detection”.

mokapot: Fast and flexible semi-supervised learning for peptide detection

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.01.407270

N/A

0DataRank · unranked

4 citations

William Stafford Noble, William E. Fondrie

mokapot: Fast and Flexible Semisupervised Learning for Peptide Detection

Journal of Proteome Research(2021)10.1021/acs.jproteome.0c01010

N/A

0DataRank · unranked

75 citations

William Stafford Noble, William E. Fondrie

ppx: Programmatic Access to Proteomics Data Repositories

Journal of Proteome Research(2021)10.1021/acs.jproteome.1c00454

N/A

0DataRank · unranked

12 citations

Wout Bittremieux, William Stafford Noble, William E. Fondrie

Tandem Mass Spectrometry–Based Amyloid Typing Using Manual Microdissection and Open-Source Data Processing

American Journal of Clinical Pathology(2021)10.1093/ajcp/aqab185

N/A

0DataRank · unranked

9 citations

Kelly D. Smith, Han-Yin Yang, Clark M. Henderson, Hannah Pflaum, Melissa Lerch +7 more

ppx: Programmatic access to proteomics data repositories

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.29.446304

N/A

0DataRank · unranked

0 citations

Wout Bittremieux, William Stafford Noble, William E. Fondrie

A flexible workflow for building spectral libraries from narrow window data independent acquisition mass spectrometry data

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.22.469568

N/A

0DataRank · unranked

0 citations

William E. Fondrie, Christopher D. McGann, Alexander Federation, William Stafford Noble, Michael J. MacCoss +2 more

Building Spectral Libraries from Narrow-Window Data-Independent Acquisition Mass Spectrometry Data

Journal of Proteome Research(2022)10.1021/acs.jproteome.1c00895

N/A

0DataRank · unranked

18 citations

William E. Fondrie, Christopher D. McGann, Alexander Federation, William Stafford Noble, Michael J. MacCoss +2 more

The Crux toolkit for analysis of bottom-up tandem mass spectrometry proteomics data

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.02.510538

N/A

0DataRank · unranked

2 citations

Frank Lawrence Nii Adoquaye Acquaye, Kishankumar Bhimani, Jimmy K. Eng, William E. Fondrie, Charles E. Grant +7 more

The Crux Toolkit for Analysis of Bottom-Up Tandem Mass Spectrometry Proteomics Data

Journal of Proteome Research(2023)10.1021/acs.jproteome.2c00615

N/A

0DataRank · unranked

20 citations

Frank Lawrence Nii Adoquaye Acquaye, Kishankumar Bhimani, Jimmy K. Eng, William E. Fondrie, Charles E. Grant +7 more

Improved quantitation in data-independent acquisition proteomics via retention time boundary imputation

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.05.27.656394

N/A

0DataRank · unranked

2 citations

Michael Riffle, Nicholas Shulman, William E. Fondrie, Christine C. Wu, Danielle P. Johnson Erickson +8 more