Patrick M. Gaffney

MedicineImmunology and MicrobiologyEnvironmental ScienceBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 19 papers. Top paper: “Identification of a Gene Expression Signature Associated with Recurrent Disease in Squamous Cell Carcinoma of the Head and Neck”.

Identification of a Gene Expression Signature Associated with Recurrent Disease in Squamous Cell Carcinoma of the Head and Neck

Cancer Research(2004)10.1158/0008-5472.can-03-2144

N/A

0.900DataRank · unranked

403 citations

Grier P. Page, Bryan S. Michalowicz, Ketan J. Patel, Sonja E. Volker, Stefan E. Pambuccian +5 more

Dysregulated long non-coding RNA in Sjögren’s disease impacts both interferon and adaptive immune responses

RMD Open(2022)10.1136/rmdopen-2022-002672

N/A

0.747DataRank · unranked

21 citations

Bhuwan Khatri, Chuang Li, Kandice L. Tessneer, John A. Ice, A. M. Stolarczyk +20 more

Deep sequencing reveals a DAP1 regulatory haplotype that potentiates autoimmunity in systemic lupus erythematosus

Genome biology(2020)10.1186/s13059-020-02184-z

N/A

0DataRank · unranked

21 citations

Ran Song, Honglin Zhu, Linley Riediger, Dong-Jae Jun, Chaoying Liang +23 more

Nearest-Neighbor Projected Distance Regression for Epistasis Detection in GWAS With Population Structure Correction

Frontiers in Genetics(2020)10.3389/fgene.2020.00784

N/A

0DataRank · unranked

1 citations

Courtney G. Montgomery, Patrick M. Gaffney, Brett A. McKinney, Marziyeh Arabnejad

CD4+ T cells from children with active juvenile idiopathic arthritis show altered chromatin features associated with transcriptional abnormalities

Scientific Reports(2021)10.1038/s41598-021-82989-5

N/A

0DataRank · unranked

15 citations

Kaiyu Jiang, Teresa Hennon, Lucy Holmes, Sonja D. Williams, Yao Fu +4 more

Variants on the UBE2L3/YDJC Autoimmune Disease Risk Haplotype Increase UBE2L3 Expression by Modulating CCCTC‐Binding Factor and YY1 Binding

Arthritis & Rheumatology(2021)10.1002/art.41925

N/A

0DataRank · unranked

8 citations

Kandice L. Tessneer, Yao Fu, Satish Pasula, Richard Pelikan, Jennifer A. Kelly +3 more

Joint analysis reveals shared autoimmune disease associations and identifies common mechanisms

medRxiv(2021)10.1101/2021.05.13.21257044

N/A

0DataRank · unranked

13 citations

Noah J Connally, Pierre‐Paul Axisa, Christiane Gasperi, Mitja Mitrovič, David A. van Heel +13 more

Genome-wide association study identifies Sjögren’s risk loci with functional implications in immune and glandular cells

Nature Communications(2022)10.1038/s41467-022-30773-y

N/A

0DataRank · unranked

110 citations

Kandice L. Tessneer, Astrid Rasmussen, Farhang Aghakhanian, Tove Ragna Reksten, Adam Adler +62 more

Systemic lupus erythematosus variants modulate the function of an enhancer upstream of TNFAIP3

Frontiers in Genetics(2022)10.3389/fgene.2022.1011965

N/A

0DataRank · unranked

14 citations

Jaanam Gopalakrishnan, Yao Fu, Kandice L. Tessneer, Mandi M. Wiley, Richard Pelikan +3 more

Relationship Between a Vitamin D Genetic Risk Score and Autoantibodies Among First-Degree Relatives of Probands With Rheumatoid Arthritis and Systemic Lupus Erythematosus

Frontiers in Immunology(2022)10.3389/fimmu.2022.881332

N/A

0DataRank · unranked

11 citations

Elizabeth A. Bemis, Jennifer Seifert, Joel M. Guthridge, Kendra A. Young, M. Kristen Demoruelle +16 more

POS0098 LINC01871, IMPLICATED IN SJÖGREN'S DISEASE PATHOGENESIS, IS REGULATED BY INTERFERON-G AND CALCINEURIN SIGNALING

Annals of the Rheumatic Diseases(2022)10.1136/annrheumdis-2022-eular.2524

N/A

0DataRank · unranked

0 citations

B. Khatri, C. Li, K. L. Tessneer, John Ice, A. M. Stolarczyk +20 more

Potential Roles of Activin in Head and Neck Squamous Cell Carcinoma Progression and Mortality

Anticancer Research(2023)10.21873/anticanres.16733

N/A

0DataRank · unranked

1 citations

Ketan Patel, Beverly R. Wuertz, Patrick M. Gaffney, Frank G. Ondrey, Seth Buryska

Comparison of the three-dimensional chromatin structures of adolescent and adult peripheral blood B cells: implications for the study of pediatric autoimmune diseases

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.11.557171

N/A

0DataRank · unranked

1 citations

Yao Fu, Jennifer A. Kelly, Patrick M. Gaffney, Lucy Holmes, James N. Jarvis +1 more

Variants in the DDX6-CXCR5 autoimmune disease risk locus influence the regulatory network in immune cells and salivary gland

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.05.561076

N/A

0DataRank · unranked

1 citations

Bhuwan Khatri, Michelle L. Joachims, Kandice L. Tessneer, A. M. Stolarczyk, Astrid Rasmussen +72 more

Massively parallel reporter assay confirms regulatory potential of hQTLs and reveals important variants in lupus and other autoimmune diseases

Human Genetics and Genomics Advances(2024)10.1016/j.xhgg.2024.100279

N/A

0DataRank · unranked

4 citations

Jennifer A. Kelly, Jaanam Gopalakrishnan, Richard Pelikan, Kandice L. Tessneer, Satish Pasula +4 more

Analysis of nuclear receptor expression in head and neck cancer

Cancer Genetics(2024)10.1016/j.cancergen.2024.12.003

N/A

0DataRank · unranked

1 citations

Cynthia Koenigsberg, Tyler G. Kimbrough, Jesse Ping, Gema Souto Adeva, Beverly R. Wuertz +3 more

Variants in the DDX6-CXCR5 autoimmune disease risk locus influence the regulatory network in immune cells and salivary gland

Annals of the Rheumatic Diseases(2025)10.1016/j.ard.2025.04.023

N/A

0DataRank · unranked

2 citations

Marcin Radziszewski, Bhuwan Khatri, Michelle L. Joachims, Kandice L. Tessneer, A. M. Stolarczyk +75 more

Defining three dimensional chromatin structures of pediatric and adolescent B cells using primary B cell and EBV-immortalized B cell reference genomes

BMC Medical Genomics(2025)10.1186/s12920-025-02166-9

N/A

0DataRank · unranked

1 citations

Yao Fu, Jennifer A. Kelly, Patrick M. Gaffney, Lucy Holmes, James N. Jarvis +1 more

Mutations in Spliceosomal Genes PPIL1 and PRP17 Cause Neurodegenerative Pontocerebellar Hypoplasia with Microcephaly

Neuron(2020)10.1016/j.neuron.2020.10.035

N/A

0DataRank · unranked

59 citations

A. Dinsmoor Webb, Chen Li, Danny Antaki, Sangmoon Lee, Martin W. Breuss +32 more