🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Elmar Pruesse

National Jewish Health

ORCID: 0000-0002-1656-6020

Also affiliated with University of Colorado Anschutz Medical Campus, University of Colorado Denver

Biochemistry, Genetics and Molecular BiologyEnvironmental ScienceMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
33.1Author DataRank

Indexed papers

3in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB

Nucleic Acids Research(2007)10.1093/nar/gkm864
Top 1%
13.3DataRank
Top 1%6923 citations

K. Knittel, B. M. Fuchs, W. Ludwig, Elmar Pruesse, Christian Quast +5 more

Papers

Driven by 13 papers — median percentile 100. Top paper: “SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB”.

SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB

Nucleic Acids Research(2007)10.1093/nar/gkm864
Top 1%
13.3DataRank
Top 1%6923 citations

K. Knittel, B. M. Fuchs, W. Ludwig, Elmar Pruesse, Christian Quast +5 more

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

Nucleic Acids Research(2012)10.1093/nar/gks1219
Top 1%
12.9DataRank
Top 1%34334 citations

Elmar Pruesse, Pelin Yilmaz, Jan Gerken, Timmy Schweer, Pablo Yarza +3 more

Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications

Nature Biotechnology(2011)10.1038/nbt.1823
Top 3%
6.9DataRank
Top 3%815 citations

Renzo Kottmann, Dawn Field, Rob Knight, James R. Cole, Linda Amaral-Zettler +112 more

Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies

Nucleic Acids Research(2012)10.1093/nar/gks808
N/A
1.4DataRank · unranked
8835 citations

Elmar Pruesse, Timmy Schweer, Jörg Peplies, Christian Quast, Matthias Horn +2 more

Type 2 and interferon inflammation strongly regulate SARS-CoV-2 related gene expression in the airway epithelium

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.09.034454
N/A
0.637DataRank · unranked
69 citations

Peter DeFord, Nathan D. Jackson, Michael T. Montgomery, Jamie L. Everman, Cydney Rios +22 more

Type 1 Immune Responses Related to Viral Infection Influence Corticosteroid Response in Asthma

American Journal of Respiratory and Critical Care Medicine(2024)10.1164/rccm.202402-0403oc
N/A
0.500DataRank · unranked
27 citations

Nathan D. Jackson, Satria P. Sajuthi, Elmar Pruesse, Camille M. Moore, Jamie L. Everman +22 more

The Common Cold Is Associated With Protection From SARS-CoV-2 Infections

The Journal of Infectious Diseases(2025)10.1093/infdis/jiaf374
N/A
0.440DataRank · unranked
10 citations

E.A. Secor, Jamie L. Everman, Ana Fairbanks-Mahnke, Nathan D. Jackson, Elmar Pruesse +36 more

The Puerto Rican Infant Metagenomic and Epidemiologic Study of Respiratory Outcomes (PRIMERO): Design and Baseline Characteristics for a Birth Cohort Study of Early-life Viral Respiratory Illnesses and Airway Dysfunction in Puerto Rican Children

medRxiv(2024)10.1101/2024.04.15.24305359
N/A
0.165DataRank · unranked
2 citations

Jennifer R. Elhawary, Celeste Eng, Sam S. Oh, Sandra Salazar, María G. Contreras +32 more

Independent and interactive effects of viral species on early-life lower respiratory tract illness

Journal of Infection(2025)10.1016/j.jinf.2025.106616
N/A
0DataRank · unranked
0 citations

E.A. Secor, Ana Fairbanks-Mahnke, Jamie L. Everman, Jennifer R. Elhawary, Jonathan Witonsky +32 more

Type 2 and interferon inflammation regulate SARS-CoV-2 entry factor expression in the airway epithelium

Nature Communications(2020)10.1038/s41467-020-18781-2
N/A
0DataRank · unranked
196 citations

Peter DeFord, Yingchun Li, Nathan D. Jackson, Michael T. Montgomery, Jamie L. Everman +23 more

Asthma severity and corticosteroid response depend on variable type 1 and type 2 inflammation in the airway

medRxiv(2023)10.1101/2023.10.05.23296609
N/A
0DataRank · unranked
5 citations

Nathan D. Jackson, Satria P. Sajuthi, Elmar Pruesse, Camille M. Moore, Jamie L. Everman +22 more

Viral Determinants of Childhood Asthma Exacerbation Severity and Treatment Response

The Journal of Allergy and Clinical Immunology In Practice(2024)10.1016/j.jaip.2024.09.020
N/A
0DataRank · unranked
5 citations

Nathan D. Jackson, Katharine L. Hamlington, Jamie L. Everman, Elmar Pruesse, E.A. Secor +13 more

Independent and interactive effects of viral species on risk for lower respiratory tract illnesses in early life

medRxiv(2025)10.1101/2025.02.25.25322678
N/A
0DataRank · unranked
0 citations

E.A. Secor, Ana Fairbanks-Mahnke, Jamie L. Everman, Jennifer R. Elhawary, Jonathan Witonsky +32 more