Jennifer M. Dan

Also affiliated with University of California San Diego

MedicineImmunology and MicrobiologyBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 40 papers. Top paper: “Targets of T Cell Responses to SARS-CoV-2 Coronavirus in Humans with COVID-19 Disease and Unexposed Individuals”.

Targets of T Cell Responses to SARS-CoV-2 Coronavirus in Humans with COVID-19 Disease and Unexposed Individuals

Cell(2020)10.1016/j.cell.2020.05.015

N/A

1.2DataRank · unranked

4014 citations

Daniela Weiskopf, Sydney I. Ramirez, José Mateus, Jennifer M. Dan, Carolyn Rydyznski Moderbacher +15 more

Antigen-Specific Adaptive Immunity to SARS-CoV-2 in Acute COVID-19 and Associations with Age and Disease Severity

Cell(2020)10.1016/j.cell.2020.09.038

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1.1DataRank · unranked

1960 citations

Sydney I. Ramirez, Jennifer M. Dan, Alba Grifoni, Kathryn M. Hastie, Daniela Weiskopf +19 more

Selective and cross-reactive SARS-CoV-2 T cell epitopes in unexposed humans

Science(2020)10.1126/science.abd3871

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1.1DataRank · unranked

1276 citations

Alba Grifoni, Alison Tarke, John Sidney, Sydney I. Ramirez, Jennifer M. Dan +21 more

Elongated neutrophil-derived structures are blood-borne microparticles formed by rolling neutrophils during sepsis

The Journal of Experimental Medicine(2020)10.1084/jem.20200551

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0DataRank · unranked

57 citations

Konrad Buscher, Cristina B. Lorenzini, Matthew Meyer, Ryosuke Saigusa, Zhichao Fan +20 more

Immunological memory to SARS-CoV-2 assessed for up to eight months after infection

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.15.383323

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0DataRank · unranked

146 citations

Jose Mateus, Yu Kato, Kathryn M. Hastie, Esther Dawen Yu, Caterina E. Faliti +16 more

Comprehensive analysis of T cell immunodominance and immunoprevalence of SARS-CoV-2 epitopes in COVID-19 cases

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.08.416750

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0DataRank · unranked

87 citations

John Sidney, Conner K. Kidd, Jennifer M. Dan, Sydney I. Ramirez, Esther Dawen Yu +17 more

AI-guided discovery of the invariant host response to viral pandemics

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.21.305698

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0DataRank · unranked

12 citations

Gajanan D. Katkar, Soni Khandelwal, Mahdi Behroozikhah, Amanraj Claire, Vanessa Castillo +17 more

Immunological memory to SARS-CoV-2 assessed for up to 8 months after infection

Science(2021)10.1126/science.abf4063

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0DataRank · unranked

3012 citations

José Mateus, Yu Kato, Kathryn M. Hastie, Esther Dawen Yu, Caterina E. Faliti +16 more

Impact of SARS-CoV-2 variants on the total CD4+ and CD8+ T cell reactivity in infected or vaccinated individuals

Cell Reports Medicine(2021)10.1016/j.xcrm.2021.100355

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0DataRank · unranked

676 citations

John Sidney, Nils Methot, Esther Dawen Yu, Yun Zhang, Jennifer M. Dan +16 more

Comprehensive analysis of T cell immunodominance and immunoprevalence of SARS-CoV-2 epitopes in COVID-19 cases

Cell Reports Medicine(2021)10.1016/j.xcrm.2021.100204

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0DataRank · unranked

579 citations

John Sidney, Conner K. Kidd, Jennifer M. Dan, Sydney I. Ramirez, Esther Dawen Yu +17 more

Low-dose mRNA-1273 COVID-19 vaccine generates durable memory enhanced by cross-reactive T cells

Science(2021)10.1126/science.abj9853

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0DataRank · unranked

354 citations

Jennifer M. Dan, Zeli Zhang, Carolyn Rydyznski Moderbacher, Marshall Lammers, Benjamin Goodwin +4 more

Differential T-Cell Reactivity to Endemic Coronaviruses and SARS-CoV-2 in Community and Health Care Workers

The Journal of Infectious Diseases(2021)10.1093/infdis/jiab176

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0DataRank · unranked

85 citations

Suresh Pallikkuth, Erin Williams, Esther Dawen Yu, José Mateus, Lorenzo Quiambao +17 more

AI-guided discovery of the invariant host response to viral pandemics

EBioMedicine(2021)10.1016/j.ebiom.2021.103390

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0DataRank · unranked

54 citations

Gajanan D. Katkar, Soni Khandelwal, Mahdi Behroozikhah, Amanraj Claire, Vanessa Castillo +17 more

Negligible impact of SARS-CoV-2 variants on CD4 + and CD8 + T cell reactivity in COVID-19 exposed donors and vaccinees

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.27.433180

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0DataRank · unranked

156 citations

John Sidney, Nils Methot, Yun Zhang, Jennifer M. Dan, Benjamin Goodwin +13 more

SARS-CoV-2 vaccination induces immunological memory able to cross-recognize variants from Alpha to Omicron

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.28.474333

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0DataRank · unranked

42 citations

Camila H. Coelho, Zeli Zhang, Jennifer M. Dan, Esther Dawen Yu, Nils Methot +12 more

Low dose mRNA-1273 COVID-19 vaccine generates durable T cell memory and antibodies enhanced by pre-existing crossreactive T cell memory

medRxiv(2021)10.1101/2021.06.30.21259787

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0DataRank · unranked

25 citations

Jennifer M. Dan, Zeli Zhang, Carolyn Rydyznski Moderbacher, Marshall Lammers, Benjamin Goodwin +4 more

COVID-19 lung disease shares driver AT2 cytopathic features with Idiopathic pulmonary fibrosis

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.28.470269

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0DataRank · unranked

11 citations

Vanessa Castillo, Celia R. Espinoza, Courtney Tindle, Ayden G. Fonseca, Jennifer M. Dan +5 more

Profiling Transcription Initiation in Peripheral Leukocytes Reveals Severity-Associated Cis-Regulatory Elements in Critical COVID-19

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.08.24.457187

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0DataRank · unranked

8 citations

Sascha H. Duttke, Mazen Odish, Hiep D. Le, Emily A. Hansen, Celina T. Nguyen +21 more

Differential T cell reactivity to seasonal coronaviruses and SARS-CoV-2 in community and health care workers

medRxiv(2021)10.1101/2021.01.12.21249683

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0DataRank · unranked

4 citations

Suresh Pallikkuth, Erin Williams, Esther Dawen Yu, José Mateus, Lorenzo Quiambao +17 more

Distinguishing COVID-19 infection and vaccination history by T cell reactivity

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.15.472874

N/A

0DataRank · unranked

1 citations

Eric Wang, Emily Garrigan, Benjamin Goodwin, Aaron Sutherland, James Chang +12 more

SARS-CoV-2 vaccination induces immunological T cell memory able to cross-recognize variants from Alpha to Omicron

Cell(2022)10.1016/j.cell.2022.01.015

N/A

0DataRank · unranked

922 citations

Camila H. Coelho, Zeli Zhang, Jennifer M. Dan, Esther Dawen Yu, Nils Methot +12 more

Humoral and cellular immune memory to four COVID-19 vaccines

Cell(2022)10.1016/j.cell.2022.05.022

N/A

0DataRank · unranked

599 citations

José Mateus, Camila H. Coelho, Jennifer M. Dan, Carolyn Rydyznski Moderbacher, Rosa Isela Gálvez +13 more

Omicron spike function and neutralizing activity elicited by a comprehensive panel of vaccines

Science(2022)10.1126/science.abq0203

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0DataRank · unranked

198 citations

Amin Addetia, Ha V. Dang, Cameron Stewart, Jack T Brown, William K. Sharkey +27 more

Defining antigen targets to dissect vaccinia virus and monkeypox virus-specific T cell responses in humans

Cell Host & Microbe(2022)10.1016/j.chom.2022.11.003

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0DataRank · unranked

70 citations

Yun Zhang, Alison Tarke, John Sidney, Paul Rubiro, Maria Reina-Campos +5 more

COVID-19 lung disease shares driver AT2 cytopathic features with Idiopathic pulmonary fibrosis

EBioMedicine(2022)10.1016/j.ebiom.2022.104185

N/A

0DataRank · unranked

42 citations

Vanessa Castillo, Celia R. Espinoza, Courtney Tindle, Ayden G. Fonseca, Jennifer M. Dan +5 more

Development of Host Immune Response to Bacteriophage in a Lung Transplant Recipient on Adjunctive Phage Therapy for a Multidrug-Resistant Pneumonia

The Journal of Infectious Diseases(2022)10.1093/infdis/jiac368

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0DataRank · unranked

34 citations

Susan M. Lehman, Rita Al-Kolla, Samuel Penziner, Kamyar Afshar, Gordon Yung +9 more

Development of a T cell-based immunodiagnostic system to effectively distinguish SARS-CoV-2 infection and COVID-19 vaccination status

Cell Host & Microbe(2022)10.1016/j.chom.2022.02.003

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0DataRank · unranked

51 citations

Eric Wang, Emily Garrigan, Benjamin Goodwin, Aaron Sutherland, Alison Tarke +15 more

Broadly neutralizing antibodies to SARS-related viruses can be readily induced in rhesus macaques

Science Translational Medicine(2022)10.1126/scitranslmed.abl9605

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0DataRank · unranked

35 citations

Meng Yuan, Sean Callaghan, Rami Musharrafieh, Ge Song, Murillo Silva +33 more

Observations and Perspectives on Adaptive Immunity to Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2)

Clinical Infectious Diseases(2022)10.1093/cid/ciac310

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0DataRank · unranked

18 citations

Ricardo da Silva Antunes, Alba Grifoni, Daniela Weiskopf, Shane Crotty, Alessandro Sette +1 more

Design and validation of HIV peptide pools for detection of HIV-specific CD4+ and CD8+ T cells

PLoS ONE(2022)10.1371/journal.pone.0268370

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0DataRank · unranked

7 citations

Alba Grifoni, Shane Crotty, Alessandro Sette, Sara Gianella, Jennifer M. Dan +1 more

HIV but Not CMV Replication Alters the Blood Cytokine Network during Early HIV Infection in Men

Viruses(2022)10.3390/v14081833

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0DataRank · unranked

1 citations

Alan Wells, Jennifer M. Dan, Stephen A. Rawlings, Susan J. Little, Wendy Fitzgerald +3 more

Omicron BA.1 and BA.2 neutralizing activity elicited by a comprehensive panel of human vaccines

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.15.484542

N/A

0DataRank · unranked

45 citations

Kaitlin R. Sprouse, Alexandra C. Walls, Ignacio Mazzitelli, Jennifer K. Logue, Nicholas Franko +18 more

Defining antigen targets to dissect vaccinia virus (VACV) and Monkeypox virus (MPXV)-specific T cell responses in humans

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.06.506534

N/A

0DataRank · unranked

3 citations

Yun Zhang, Alison Tarke, John Sidney, Paul Rubiro, Maria Reina-Campos +5 more

Targets and cross-reactivity of human T cell recognition of common cold coronaviruses

Cell Reports Medicine(2023)10.1016/j.xcrm.2023.101088

N/A

0DataRank · unranked

36 citations

Yun Zhang, Nils Methot, Tara M. Narowski, Elizabeth J. Phillips, S. Mallal +9 more

Acute and Postacute COVID-19 Outcomes Among Immunologically Naive Adults During Delta vs Omicron Waves

JAMA Network Open(2023)10.1001/jamanetworkopen.2023.1181

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0DataRank · unranked

22 citations

Alpana Waghmare, Antje Heit, Brianna Levenson Shakoor, Louise E. Kimball, Nina Ozbek +17 more

Dynamic activity in cis-regulatory elements of leukocytes identifies transcription factor activation and stratifies COVID-19 severity in ICU patients

Cell Reports Medicine(2023)10.1016/j.xcrm.2023.100935

N/A

0DataRank · unranked

18 citations

Sascha H. Duttke, Mazen Odish, Hiep D. Le, Emily A. Hansen, Celina T. Nguyen +21 more

Targets and cross-reactivity of human T cell recognition of Common Cold Coronaviruses

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.04.522794

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0DataRank · unranked

8 citations

Yun Zhang, Nils Methot, Tara M. Narowski, Elizabeth J. Phillips, S. Mallal +9 more

SARS-CoV-2 breakthrough infections enhance T cell response magnitude, breadth, and epitope repertoire

Cell Reports Medicine(2024)10.1016/j.xcrm.2024.101583

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0DataRank · unranked

30 citations

Parham Ramezani-Rad, Tertuliano Alves Pereira Neto, Yeji Lee, Vanessa Silva‐Moraes, Benjamin Goodwin +11 more

Evolution of SARS-CoV-2 T cell responses as a function of multiple COVID-19 boosters

Cell Reports(2025)10.1016/j.celrep.2025.115907

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0DataRank · unranked

28 citations

Vicente Fajardo-Rosas, Esther Dawen Yu, Rosa Isela Gálvez, Adam Abawi, E. Alexandar Escarrega +11 more

Evolution of SARS-CoV-2 T cell responses as a function of multiple COVID-19 boosters

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.01.08.631842

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0DataRank · unranked

4 citations

Vicente Fajardo-Rosas, Esther Dawen Yu, Rosa Isela Gálvez, Adam Abawi, E. Alexandar Escarrega +11 more