Tianyuan Yao

Computer ScienceMedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 5%percentile

0.556Author DataRank

Indexed papers

4in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 4 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Sex and APOE ε4 allele differences in longitudinal white matter microstructure in multiple cohorts of aging and Alzheimer's disease

Alzheimer s & Dementia(2024)10.1002/alz.14343

Top 42%

0.452DataRank

Top 42%14 citations

Aditi Sathe, Dimitrios Zaras, Yisu Yang, Alaina Durant, Kacie Deters +43 more

Papers

Driven by 58 papers — median percentile 11. Top paper: “Sex and APOE ε4 allele differences in longitudinal white matter microstructure in multiple cohorts of aging and Alzheimer's disease”.

Sex and APOE ε4 allele differences in longitudinal white matter microstructure in multiple cohorts of aging and Alzheimer's disease

Alzheimer s & Dementia(2024)10.1002/alz.14343

Top 42%

0.452DataRank

Top 42%14 citations

Aditi Sathe, Dimitrios Zaras, Yisu Yang, Alaina Durant, Kacie Deters +43 more

Enhancing thoracic disease detection using chest X-rays from PubMed Central Open Access

Computers in Biology and Medicine(2023)10.1016/j.compbiomed.2023.106962

N/A

0.428DataRank · unranked

7 citations

Bojian Hou, Swati Mishra, Tianyuan Yao, Yuankai Huo, Qian Yang +4 more

Compound Figure Separation of Biomedical Images: Mining Large Datasets for Self-supervised Learning

The Journal of Machine Learning for Biomedical Imaging(2022)10.59275/j.melba.2022-5aa9

Top 78%

0.104DataRank

Top 78%1 citations

Chang Qu, Jun Long, Quan Liu, Ruining Deng, Yuanhan Tian +11 more

Segment Anything Model (SAM) for Digital Pathology: Assess Zero-shot Segmentation on Whole Slide Imaging

arXiv (Cornell University)(2023)10.48550/arxiv.2304.04155

N/A

0DataRank · unranked

97 citations

Can Cui, Quan Liu, Tianyuan Yao, Lucas W. Remedios, Shunxing Bao +11 more

Comparing voxel- and feature-wise harmonization of complex graph measures from multiple sites for structural brain network investigation of aging

PubMed(2023)10.1117/12.2653947

N/A

0DataRank · unranked

9 citations

Leon Y. Cai, Tianyuan Yao, Derek B. Archer, Kurt G. Schilling, Timothy J. Hohman +6 more

Deep constrained spherical deconvolution for robust harmonization

PubMed(2023)10.1117/12.2654398

N/A

0DataRank · unranked

6 citations

François Rheault, Leon Y. Cai, Vishwesh Nath, Zuhayr Asad, Nancy R. Newlin +7 more

DeepN4: Learning N4ITK Bias Field Correction for T1-weighted Images

Research Square(2023)10.21203/rs.3.rs-3585882/v1

N/A

0DataRank · unranked

4 citations

Tianyuan Yao, Leon Y. Cai, Ho Hin Lee, Nancy R. Newlin, Michael E. Kim +13 more

Robust Fiber Orientation Distribution Function Estimation Using Deep Constrained Spherical Deconvolution for Diffusion MRI

arXiv (Cornell University)(2023)10.48550/arxiv.2306.02900

N/A

0DataRank · unranked

2 citations

François Rheault, Leon Y. Cai, Vishwesh Nath, Zuhayr Asad, Nancy R. Newlin +9 more

MidRISH: Unbiased harmonization of rotationally invariant harmonics of the diffusion signal

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.12.553099

N/A

0DataRank · unranked

1 citations

Michael E. Kim, Praitayini Kanakaraj, Tianyuan Yao, Timothy J. Hohman, Kimberly R. Pechman +7 more

Characterizing patterns of diffusion tensor imaging variance in aging brains

medRxiv(2023)10.1101/2023.08.22.23294381

N/A

0DataRank · unranked

0 citations

Qi Yang, Michael E. Kim, Nazirah Mohd Khairi, Leon Y. Cai, Nancy R. Newlin +14 more

DeepN4: Learning N4ITK Bias Field Correction for T1-weighted Images

Neuroinformatics(2024)10.1007/s12021-024-09655-9

N/A

0DataRank · unranked

14 citations

Tianyuan Yao, Leon Y. Cai, Ho Hin Lee, Nancy R. Newlin, Michael E. Kim +15 more

Robust fiber orientation distribution function estimation using deep constrained spherical deconvolution for diffusion-weighted magnetic resonance imaging

Journal of Medical Imaging(2024)10.1117/1.jmi.11.1.014005

N/A

0DataRank · unranked

10 citations

François Rheault, Leon Y. Cai, Vishwesh Nath, Zuhayr Asad, Nancy R. Newlin +9 more

Field-of-view extension for brain diffusion MRI via deep generative models

Journal of Medical Imaging(2024)10.1117/1.jmi.11.4.044008

N/A

0DataRank · unranked

4 citations

Shunxing Bao, Michael Kim, Nancy R. Newlin, Praitayini Kanakaraj, Tianyuan Yao +11 more

MidRISH: Unbiased harmonization of rotationally invariant harmonics of the diffusion signal

Magnetic Resonance Imaging(2024)10.1016/j.mri.2024.03.033

N/A

0DataRank · unranked

1 citations

Michael E. Kim, Praitayini Kanakaraj, Tianyuan Yao, Timothy J. Hohman, Kimberly R. Pechman +7 more

All-in-SAM: from Weak Annotation to Pixel-wise Nuclei Segmentation with Prompt-based Finetuning

Journal of Physics Conference Series(2024)10.1088/1742-6596/2722/1/012012

N/A

0DataRank · unranked

40 citations

Ruining Deng, Quan Liu, Tianyuan Yao, Shunxing Bao, Lucas W. Remedios +4 more

PrPSeg: Universal Proposition Learning for Panoramic Renal Pathology Segmentation

PubMed(2024)10.1109/cvpr52733.2024.01115

N/A

0DataRank · unranked

12 citations

Quan Liu, Can Cui, Tianyuan Yao, Jialin Yue, Juming Xiong +9 more

HATs: Hierarchical Adaptive Taxonomy Segmentation for Panoramic Pathology Image Analysis

Lecture notes in computer science(2024)10.1007/978-3-031-72083-3_15

N/A

0DataRank · unranked

5 citations

Quan Liu, Can Cui, Tianyuan Yao, Juming Xiong, Shunxing Bao +8 more

Learning-based free-water correction using single-shell diffusion MRI

PubMed(2024)10.1117/12.3006901

N/A

0DataRank · unranked

3 citations

Derek B. Archer, Praitayini Kanakaraj, Nancy R. Newlin, Shunxing Bao, Daniel Moyer +4 more

Nonlinear gradient field estimation in diffusion MRI tensor simulation

PubMed(2024)10.1117/12.3005364

N/A

0DataRank · unranked

1 citations

Tianyuan Yao, Nancy R. Newlin, Leon Y. Cai, Kurt G. Schilling, Baxter P. Rogers +4 more

Spatial pathomics toolkit for quantitative analysis of podocyte nuclei with histology and spatial transcriptomics data in renal pathology

PubMed(2024)10.1117/12.3006318

N/A

0DataRank · unranked

1 citations

Yu Wang, Ruining Deng, Quan Liu, Can Cui, Tianyuan Yao +7 more

GLAM: Glomeruli Segmentation for Human Pathological Lesions using Adapted Mouse Model

arXiv (Cornell University)(2024)10.48550/arxiv.2407.18390

N/A

0DataRank · unranked

1 citations

Mengmeng Yin, Ruining Deng, Quan Liu, Tianyuan Yao, Can Cui +7 more

Sex, racial, and APOE -ε4 allele differences in longitudinal white matter microstructure in multiple cohorts of aging and Alzheimer’s disease

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.06.10.598357

Top 100%

0DataRank

Top 100%0 citations

Aditi Sathe, Dimitrios Zaras, Yisu Yang, Alaina Durant, Kacie Deters +41 more

Weighted Circle Fusion: Ensembling Circle Representation from Different Object Detection Results

arXiv (Cornell University)(2024)10.48550/arxiv.2406.19540

N/A

0DataRank · unranked

0 citations

Tianyuan Yao, Ruining Deng, Quan Liu, Juming Xiong, Guo, Junlin +3 more

Characterizing patterns of diffusion tensor imaging variance in aging brains

Journal of Medical Imaging(2024)10.1117/1.jmi.11.4.044007

N/A

0DataRank · unranked

0 citations

Qi Yang, Michael E. Kim, Nazirah Mohd Khairi, Leon Y. Cai, Nancy R. Newlin +14 more

Dataset Distillation in Medical Imaging: A Feasibility Study

arXiv (Cornell University)(2024)10.48550/arxiv.2407.14429

N/A

0DataRank · unranked

0 citations

Can Cui, Quan Liu, Ruining Deng, Tianyuan Yao, Marilyn Lionts +2 more

Assessment of Cell Nuclei AI Foundation Models in Kidney Pathology

arXiv (Cornell University)(2024)10.48550/arxiv.2408.06381

N/A

0DataRank · unranked

0 citations

Siqi Lu, Can Cui, Ruining Deng, Tianyuan Yao, Tao, Zhewen +12 more

Automatic Image Unfolding and Stitching Framework for Esophageal Lining Video Based on Density-Weighted Feature Matching

arXiv (Cornell University)(2024)10.48550/arxiv.2410.01148

N/A

0DataRank · unranked

0 citations

Juming Xiong, Ruining Deng, Tianyuan Yao, Regina N. Tyree, Girish Hiremath +2 more

Cross-organ Deployment of EOS Detection AI without Retraining: Feasibility and Limitation

arXiv (Cornell University)(2024)10.48550/arxiv.2411.15942

N/A

0DataRank · unranked

0 citations

Juming Xiong, Tianyuan Yao, Ruining Deng, Junlin Guo, Jialin Yue +3 more

Glo-In-One-v2: Holistic Identification of Glomerular Cells, Tissues, and Lesions in Human and Mouse Histopathology

arXiv (Cornell University)(2024)10.48550/arxiv.2411.16961

N/A

0DataRank · unranked

0 citations

Mengmeng Yin, Ruining Deng, Quan Liu, Tianyuan Yao, Can Cui +7 more

GloFinder: AI-empowered QuPath Plugin for WSI-level Glomerular Detection, Visualization, and Curation

arXiv (Cornell University)(2024)10.48550/arxiv.2411.18795

N/A

0DataRank · unranked

0 citations

Tianyuan Yao, Ruining Deng, Siqi Lu, Junlin Guo, Quan Liu +5 more

Segment Anything Model (SAM) for Digital Pathology: Assess Zero-shot Segmentation on Whole Slide Imaging

Electronic Imaging(2025)10.2352/ei.2025.37.14.coimg-132

N/A

0DataRank · unranked

47 citations

Can Cui, Quan Liu, Tianyuan Yao, Lucas W. Remedios, Shunxing Bao +11 more

The effect of Alzheimer's disease genetic factors on limbic white matter microstructure

Alzheimer s & Dementia(2025)10.1002/alz.70130

N/A

0DataRank · unranked

8 citations

Aditi Sathe, Dimitrios Zaras, Yisu Yang, Alaina Durant, Michael E. Kim +43 more

Glo-In-One-v2: holistic identification of glomerular cells, tissues, and lesions in human and mouse histopathology

Journal of Medical Imaging(2025)10.1117/1.jmi.12.6.061406

N/A

0DataRank · unranked

5 citations

Mengmeng Yin, Ruining Deng, Quan Liu, Tianyuan Yao, Can Cui +7 more

Evaluating cell AI foundation models in kidney pathology with human-in-the-loop enrichment

Communications Medicine(2025)10.1038/s43856-025-01205-x

N/A

0DataRank · unranked

4 citations

Siqi Lu, Can Cui, Ruining Deng, Tianyuan Yao, Zhewen Tao +13 more

ZeroReg3D: a zero-shot registration pipeline for 3D consecutive histopathology image reconstruction

Journal of Medical Imaging(2025)10.1117/1.jmi.12.4.044002

N/A

0DataRank · unranked

2 citations

Ruining Deng, Jialin Yue, Siqi Lu, Junlin Guo, Marilyn Lionts +9 more

GloFinder: AI-empowered QuPath plugin for WSI-level glomerular detection, visualization, and curation

Journal of Pathology Informatics(2025)10.1016/j.jpi.2025.100433

N/A

0DataRank · unranked

4 citations

Tianyuan Yao, Ruining Deng, Siqi Lu, Junlin Guo, Quan Liu +5 more

Deep learning-based free-water correction for single-shell diffusion MRI

Magnetic Resonance Imaging(2025)10.1016/j.mri.2025.110326

N/A

0DataRank · unranked

3 citations

Derek B. Archer, Praitayini Kanakaraj, Nancy R. Newlin, Shunxing Bao, Daniel Moyer +4 more

Dataset distillation in medical imaging: a feasibility study

PubMed(2025)10.1117/12.3047345

N/A

0DataRank · unranked

4 citations

Can Cui, Quan Liu, Ruining Deng, Tianyuan Yao, Marilyn Lionts +2 more

Assessment of cell nuclei AI foundation models in kidney pathology

PubMed(2025)10.1117/12.3047301

N/A

0DataRank · unranked

3 citations

Siqi Lu, Can Cui, Ruining Deng, Tianyuan Yao, Zhewen Tao +12 more

Approximate diffusion tractography from FLAIR MRI and anatomical context using recurrent neural networks

PubMed(2025)10.1117/12.3045799

N/A

0DataRank · unranked

2 citations

Michael E. Kim, Tian Yu, Praitayini Kanakaraj, Tianyuan Yao, Chenyu Gao +6 more

Post-Training Quantization for 3D Medical Image Segmentation: A Practical Study on Real Inference Engines

arXiv (Cornell University)(2025)10.48550/arxiv.2501.17343

N/A

0DataRank · unranked

0 citations

Ritchie Zhao, Ye Yu, Bin Liu, Tianyuan Yao, Junchao Zhu +4 more

PySpatial: A High-Speed Whole Slide Image Pathomics Toolkit

arXiv (Cornell University)(2025)10.48550/arxiv.2501.06151

N/A

0DataRank · unranked

0 citations

Yu Wang, Tianyuan Yao, Ruining Deng, Mengmeng Yin, Shilin Zhao +3 more

Polyhedra Encoding Transformers: Enhancing Diffusion MRI Analysis Beyond Voxel and Volumetric Embedding

arXiv (Cornell University)(2025)10.48550/arxiv.2501.13352

N/A

0DataRank · unranked

0 citations

Zhiyuan Li, Praitayini Kanakaraj, Derek B. Archer, Kurt G. Schilling, Lori L. Beason‐Held +4 more

Write Sentence with Images: Revisit the Large Vision Model with Visual Sentence

Electronic Imaging(2025)10.2352/ei.2025.37.12.hpci-172

N/A

0DataRank · unranked

0 citations

Can Cui, Ruining Deng, Tianyuan Yao, Yuechen Yang, Yucheng Tang +2 more

mTREE: Multi-level Text-guided Representation End-to-end Learning for Whole Slide Image Analysis

Electronic Imaging(2025)10.2352/ei.2025.37.12.hpci-183

N/A

0DataRank · unranked

0 citations

Ruining Deng, Can Cui, Tianyuan Yao, Yuechen Yang, Vishwesh Nath +5 more

PySpatial: A high-speed whole slide image pathomics toolkit

Electronic Imaging(2025)10.2352/ei.2025.37.12.hpci-177

N/A

0DataRank · unranked

0 citations

Yu Wang, Tianyuan Yao, Ruining Deng, Mengmeng Yin, Shilin Zhao +3 more

Enhanced Feature-based Image Stitching for Endoscopic Videos in Pediatric Eosinophilic Esophagitis

arXiv (Cornell University)(2025)10.48550/arxiv.2502.04207

N/A

0DataRank · unranked

0 citations

Muyang Li, Ruining Deng, Tianyuan Yao, Bao, Shunxing, Regina N. Tyree +3 more

KPIs 2024 Challenge: Advancing Glomerular Segmentation from Patch- to Slide-Level

arXiv (Cornell University)(2025)10.48550/arxiv.2502.07288

Top 100%

0DataRank

Top 100%0 citations

Tianyuan Yao, Yucheng Tang, Junlin Guo, Siqi Lu, Juming Xiong +42 more

GLAM: glomeruli segmentation for human pathological lesions using adapted mouse model

PubMed(2025)10.1117/12.3046823

N/A

0DataRank · unranked

0 citations

Mengmeng Yin, Ruining Deng, Quan Liu, Tianyuan Yao, Can Cui +7 more

Cross-organ deployment of EOS detection AI without retraining: feasibility and limitation

PubMed(2025)10.1117/12.3047040

N/A

0DataRank · unranked

0 citations

Juming Xiong, Tianyuan Yao, Ruining Deng, Junlin Guo, Jialin Yue +3 more

Polyhedra encoding transformers: enhancing diffusion MRI analysis beyond voxel and volumetric embedding

PubMed(2025)10.1117/12.3047244

N/A

0DataRank · unranked

0 citations

Zhiyuan Li, Praitayini Kanakaraj, Derek B. Archer, Kurt G. Schilling, Lori L. Beason‐Held +4 more

Computer Vision Methods for Spatial Transcriptomics: A Survey

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.13.682148

N/A

0DataRank · unranked

0 citations

Ruining Deng, Junlin Guo, Tianyuan Yao, Siqi Lu, Chongyu Qu +12 more

Fine-grained multiclass nuclei segmentation with molecular empowered all-in-SAM model

Journal of Medical Imaging(2025)10.1117/1.jmi.12.5.057501

N/A

0DataRank · unranked

0 citations

Can Cui, Ruining Deng, Yucheng Tang, Quan Liu, Tianyuan Yao +5 more

Img2ST-Net: Efficient High-Resolution Spatial Omics Prediction from Whole Slide Histology Images via Fully Convolutional Image-to-Image Learning

arXiv (Cornell University)(2025)10.48550/arxiv.2508.14393

N/A

0DataRank · unranked

0 citations

Ruining Deng, Junlin Guo, Tianyuan Yao, Juming Xiong, Chongyu Qu +8 more

Quantitative benchmarking of anomaly detection methods in digital pathology images

Machine Learning Health(2025)10.1088/3049-477x/ae0f9f

N/A

0DataRank · unranked

0 citations

Xindong Zheng, Ruining Deng, Quan Liu, Tianyuan Yao, Keith T. Wilson +6 more

Fine-grained Multi-class Nuclei Segmentation with Molecular-empowered All-in-SAM Model

arXiv (Cornell University)(2025)10.48550/arxiv.2508.15751

N/A

0DataRank · unranked

0 citations

Can Cui, Ruining Deng, Yucheng Tang, Quan Liu, Tianyuan Yao +5 more

Omni-Seg: A Scale-Aware Dynamic Network for Renal Pathological Image Segmentation

IEEE Transactions on Biomedical Engineering(2023)10.1109/tbme.2023.3260739

N/A

0DataRank · unranked

38 citations

Quan Liu, Can Cui, Tianyuan Yao, Jun Long, Zuhayr Asad +7 more

Efficient approximate signal reconstruction for correction of gradient nonlinearities in diffusion-weighted imaging

Magnetic Resonance Imaging(2023)10.1016/j.mri.2023.03.014

N/A

0DataRank · unranked

2 citations

Leon Y. Cai, Tianyuan Yao, François Rheault, Baxter P. Rogers, Adam W. Anderson +3 more

Tianyuan Yao

Indexed papers

Top data-sharing exemplar

Papers