🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Albert J. Vilella

Wellcome Trust

ORCID: 0000-0002-2005-2516
Biochemistry, Genetics and Molecular BiologyAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
35.4Author DataRank

Indexed papers

5in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 5 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

EnsemblCompara GeneTrees: Complete, duplication-aware phylogenetic trees in vertebrates

Genome Research(2008)10.1101/gr.073585.107
Top 1%
10.6DataRank
Top 1%1344 citations

Morana Vitezic, Abel Ureta-Vidal, Richard Durbin, Kerstin Lindblad‐Toh, Alexandra P. Lewis +1 more

Papers

Driven by 14 papers — median percentile 98. Top paper: “EnsemblCompara GeneTrees: Complete, duplication-aware phylogenetic trees in vertebrates”.

EnsemblCompara GeneTrees: Complete, duplication-aware phylogenetic trees in vertebrates

Genome Research(2008)10.1101/gr.073585.107
Top 1%
10.6DataRank
Top 1%1344 citations

Morana Vitezic, Abel Ureta-Vidal, Richard Durbin, Kerstin Lindblad‐Toh, Alexandra P. Lewis +1 more

The genome of a songbird

Nature(2010)10.1038/nature08819
N/A
10.5DataRank · unranked
836 citations

David F. Clayton, Hans Ellegren, Arthur P. Arnold, LaDeana W. Hillier, Axel Künstner +77 more

TreeFam: 2008 Update

Nucleic Acids Research(2007)10.1093/nar/gkm1005
Top 2%
9.1DataRank
Top 2%347 citations

Z. Chen, A. Coghlan, P. Gartung, Y. Hu, R. Li +22 more

A comparative encyclopedia of DNA elements in the mouse genome

Nature(2014)10.1038/nature13992
Top 2%
7.9DataRank
Top 2%1946 citations

Yong Cheng, Alessandra Breschi, Jost Vielmetter, Weisheng Wu, Tyrone Ryba +150 more

A high-resolution map of human evolutionary constraint using 29 mammals

Nature(2011)10.1038/nature10530
Top 2%
7.6DataRank
Top 2%1227 citations

Genome Institute at Washington University, Manuel Garber, Or Zuk, Alireza Heravi-Moussavi, Wouter Meuleman +49 more

Accurate gene-tree reconstruction by learning gene- and species-specific substitution rates across multiple complete genomes

Genome Research(2007)10.1101/gr.7105007
N/A
4.2DataRank · unranked
89 citations

Sharon L. R. Kardia, Albert J. Vilella

Most parsimonious reconciliation in the presence of gene duplication, loss, and deep coalescence using labeled coalescent trees

Genome Research(2013)10.1101/gr.161968.113
N/A
3.7DataRank · unranked
86 citations

Albert J. Vilella, Mukul S. Bansal, Sharon L. R. Kardia, Yi-Chieh Wu

Evolution of pathogenicity and sexual reproduction in eight Candida genomes

Nature(2009)10.1038/nature08064
N/A
1.1DataRank · unranked
1097 citations

Albert J. Vilella, Alireza Heravi-Moussavi, Manuel A. S. Santos, Sharadha Sakthikumar, Carol A. Munro +52 more

Phylogenetic Identification and Functional Characterization of Orthologs and Paralogs across Human, Mouse, Fly, and Worm

bioRxiv (Cold Spring Harbor Laboratory)(2014)10.1101/005736
N/A
0.893DataRank · unranked
13 citations

Mukul S. Bansal, Albert J. Vilella, Javier Herrero, Sharon L. R. Kardia, Yi-Chieh Wu

Unified modeling of gene duplication, loss, and coalescence using a locus tree

Genome Research(2012)10.1101/gr.123901.111
N/A
0.785DataRank · unranked
187 citations

Sharon L. R. Kardia, Albert J. Vilella

TreeFix: Statistically Informed Gene Tree Error Correction Using Species Trees

Systematic Biology(2012)10.1093/sysbio/sys076
N/A
0.689DataRank · unranked
98 citations

Albert J. Vilella, Mukul S. Bansal, Sharon L. R. Kardia, Yi-Chieh Wu

Phylogenomic Approach to the Evolutionary Dynamics of Gene Duplication in Birds

Evolution after Gene Duplication(2010)10.1002/9780470619902.ch14
N/A
0.327DataRank · unranked
6 citations

Albert J. Vilella, Maude W. Baldwin, Sharon L. R. Kardia, Scott V. Edwards, Chris L. Organ

Author Correction: Comparative and demographic analysis of orang-utan genomes

Nature(2022)10.1038/s41586-022-04799-7
Top 67%
0.174DataRank
Top 67%2 citations

LaDeana W. Hillier, Wesley C. Warren, Kim C. Worley, Lynne V. Nazareth, Donna M. Muzny +95 more

Development and application of a next-generation sequencing protocol and bioinformatics pipeline for the comprehensive analysis of the canine immunoglobulin repertoire

PLoS ONE(2022)10.1371/journal.pone.0270710
N/A
0DataRank · unranked
11 citations

Jolyon Martin, Albert J. Vilella, Amy E. Treeful, David R. Sargan, Allan Bradley +2 more