🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Benpeng Miao

Washington University in St. Louis

ORCID: 0000-0002-2070-2339
Agricultural and Biological SciencesBiochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 7%percentile
0.165Author DataRank

Indexed papers

1in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Comprehensive benchmarking of somatic single-nucleotide variant and indel detection at ultra-low allele fractions using short- and long-read data

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.13.681545
Top 70%
0.165DataRank
Top 70%2 citations

Dominika Maziec, Julia Markowski, Stephanie Georges, Nancy L. Parmalee, Michele Berselli +41 more

Papers

Driven by 12 papers — median percentile 30. Top paper: “Comprehensive benchmarking of somatic single-nucleotide variant and indel detection at ultra-low allele fractions using short- and long-read data”.

Comprehensive benchmarking of somatic single-nucleotide variant and indel detection at ultra-low allele fractions using short- and long-read data

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.13.681545
Top 70%
0.165DataRank
Top 70%2 citations

Dominika Maziec, Julia Markowski, Stephanie Georges, Nancy L. Parmalee, Michele Berselli +41 more

Comparison of differential accessibility analysis strategies for ATAC-seq data

Scientific Reports(2020)10.1038/s41598-020-66998-4
N/A
0DataRank · unranked
83 citations

Shuhua Fu, Xiaoyun Xing, Shaopeng Liu, Benpeng Miao, Viktoriia Bazylianska +8 more

AIAP: A Quality Control and Integrative Analysis Package to Improve ATAC-Seq Data Analysis

Genomics Proteomics & Bioinformatics(2021)10.1016/j.gpb.2020.06.025
N/A
0DataRank · unranked
44 citations

Daofeng Li, Cheng Lyu, Paul Gontarz, Benpeng Miao, Pamela A. F. Madden +3 more

Common DNA methylation dynamics in endometriod adenocarcinoma and glioblastoma suggest universal epigenomic alterations in tumorigenesis

Communications Biology(2021)10.1038/s42003-021-02094-1
N/A
0DataRank · unranked
21 citations

Benpeng Miao, Xiaoyun Xing, Ting Wang, Bo Zhang, Jennifer A. Karlow

Methamphetamine induced regional-specific transcriptomic and epigenetic changes in the rat brain

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.13.496004
N/A
0DataRank · unranked
0 citations

Xiaoyun Xing, Viktoriia Bazylianska, Pamela Madden, Anna Moszczyńska, Bo Zhang +1 more

Methamphetamine-induced region-specific transcriptomic and epigenetic changes in the brain of male rats

Communications Biology(2023)10.1038/s42003-023-05355-3
N/A
0DataRank · unranked
13 citations

Xiaoyun Xing, Viktoriia Bazylianska, Pamela Madden, Anna Moszczyńska, Bo Zhang +1 more

Review and Evaluate the Bioinformatics Analysis Strategies of ATAC-seq and CUT&Tag Data

Genomics Proteomics & Bioinformatics(2024)10.1093/gpbjnl/qzae054
N/A
0DataRank · unranked
15 citations

Benpeng Miao, Tiandao Li, Guoyan Zhao, Bo Zhang, Siyuan Cheng

Age-dependent alterations in the human striatum identify a PPP1R15B-miR-196a node as a modifier of Huntington’s disease phenotypes

Research Square(2024)10.21203/rs.3.rs-4104643/v1
N/A
0DataRank · unranked
0 citations

Victoria A. Church, Agnieszka Krzyżosiak, Shawei Chen, Ji‐Sun Kwon, Matheus Victor +5 more

Multi-platform framework for mapping somatic retrotransposition in human tissues

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.07.680917
N/A
0DataRank · unranked
1 citations

Mingyun Bae, Jinhao Wang, Boxun Zhao, Khue Nguyen, Shayna Mallett +30 more

Cross-tissue molecular responses in the liver and blood after toxicant exposures

Research Square(2025)10.21203/rs.3.rs-7610132/v1
N/A
0DataRank · unranked
1 citations

Benpeng Miao, Shuhua Fu, Wanqing Shao, Cristian Coarfa, Ravindra Kumar1 +26 more

Tissue-specific usage of transposable element-derived promoters in mouse development

Genome biology(2020)10.1186/s13059-020-02164-3
N/A
0DataRank · unranked
96 citations

Shuhua Fu, Cheng Lyu, Paul Gontarz, Ting Wang, Bo Zhang +1 more

Toxicogenomic Insights into Environmental Toxicant Exposures: The TaRGET II Resource

Research Square(2025)10.21203/rs.3.rs-7285514/v1
N/A
0DataRank · unranked
0 citations

Benpeng Miao, Shuhua Fu, Cristian Coarfa, Ravindra Kumar1, Prashant Kumar Kuntala +26 more