🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Elena Rivas

Harvard University

ORCID: 0000-0002-2084-269X

Also affiliated with Harvard University Press

Biochemistry, Genetics and Molecular BiologyPhysics and Astronomy

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile
3.7Author DataRank

Indexed papers

4in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 4 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Rfam 15: RNA families database in 2025

Nucleic Acids Research(2024)10.1093/nar/gkae1023
Top 12%
1.7DataRank
Top 12%165 citations

Emma J. Cooke, Eric P. Nawrocki, Sandra Triebel, Manja Marz, Elena Rivas +5 more

Papers

Driven by 11 papers — median percentile 71. Top paper: “Rfam 15: RNA families database in 2025”.

Rfam 15: RNA families database in 2025

Nucleic Acids Research(2024)10.1093/nar/gkae1023
Top 12%
1.7DataRank
Top 12%165 citations

Emma J. Cooke, Eric P. Nawrocki, Sandra Triebel, Manja Marz, Elena Rivas +5 more

RNA3DB: A structurally-dissimilar dataset split for training and benchmarking deep learning models for RNA structure prediction

Journal of Molecular Biology(2024)10.1016/j.jmb.2024.168552
Top 19%
1.1DataRank
Top 19%33 citations

Marcin Magnus, Siddhant Sanghi, Sachin Kadyan, Nazim Bouatta, Elena Rivas +1 more

Rfam 14: expanded coverage of metagenomic, viral and microRNA families

Nucleic Acids Research(2020)10.1093/nar/gkaa1047
N/A
1.1DataRank · unranked
1113 citations

Eric P. Nawrocki, Nancy Ontiveros‐Palacios, Joanna Argasinska, Kevin Lamkiewicz, Manja Marz +10 more

RNA3DB: A structurally-dissimilar dataset split for training and benchmarking deep learning models for RNA structure prediction

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.30.578025
Top 39%
0.497DataRank
Top 39%10 citations

Marcin Magnus, Siddhant Sanghi, Sachin Kadyan, Nazim Bouatta, Elena Rivas +1 more

Rfam 15: RNA families database in 2025

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.23.614430
Top 45%
0.408DataRank
Top 45%9 citations

Emma J. Cooke, Eric P. Nawrocki, Sandra Triebel, Manja Marz, Elena Rivas +5 more

RNA covariation at helix-level resolution for the identification of evolutionarily conserved RNA structure

PLoS Computational Biology(2023)10.1371/journal.pcbi.1011262
N/A
0DataRank · unranked
16 citations

Elena Rivas

RNA covariation at helix-level resolution for the identification of evolutionarily conserved RNA structure

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.14.536965
N/A
0DataRank · unranked
2 citations

Elena Rivas

RNAhub—an automated pipeline to search and align RNA homologs with secondary structure assessment

Nucleic Acids Research(2025)10.1093/nar/gkaf342
N/A
0DataRank · unranked
6 citations

William Gao, Nivedita Dutta, Quentin Vicens, Elena Rivas, Marcin Magnus

All-at-once RNA folding with 3D motif prediction framed by evolutionary information

Nature Methods(2025)10.1038/s41592-025-02833-w
N/A
0DataRank · unranked
3 citations

Elena Rivas, Aayush Karan

What does it take to learn the rules of RNA base pairing? A lot less than you may think

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.07.31.668042
N/A
0DataRank · unranked
2 citations

Ryan Krueger, Elena Rivas, Jayanth S. Pratap

All-at-once RNA folding with 3D motif prediction framed by evolutionary information

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.12.17.628809
N/A
0DataRank · unranked
1 citations

Elena Rivas, Aayush Karan