Nídia S. Trovão

Also affiliated with University of Illinois Urbana-Champaign, National Center for Supercomputing Applications, Fogarty International Center

MedicineAgricultural and Biological SciencesBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 4%percentile

0.617Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Epidemiology and genetic diversity of SARS-CoV-2 lineages circulating in Africa

iScience(2022)10.1016/j.isci.2022.103880

Top 32%

0.617DataRank

Top 32%14 citations

Nicholas Israel Nii-Trebi, Abdulrokeeb Jakkari, Tosin Titus Olaniran, Tosin Yetunde Senbadejo, Anna Aba Kafintu-kwashie +11 more

Papers

Driven by 40 papers — median percentile 68. Top paper: “A comprehensive SARS-CoV-2 and COVID-19 review, Part 2: host extracellular to systemic effects of SARS-CoV-2 infection”.

A comprehensive SARS-CoV-2 and COVID-19 review, Part 2: host extracellular to systemic effects of SARS-CoV-2 infection

European Journal of Human Genetics(2023)10.1038/s41431-023-01462-1

N/A

1.2DataRank · unranked

54 citations

David A. Jamison, Joseph W. Guarnieri, Victoria Zaksas, Michael J. Topper, Andrew P. Koutnik +15 more

Sampling bias and incorrect rooting make phylogenetic network tracing of SARS-COV-2 infections unreliable

Proceedings of the National Academy of Sciences(2020)10.1073/pnas.2007295117

N/A

0.665DataRank · unranked

83 citations

Sergei L. Kosakovsky Pond, Simone Marini, Brittany Rife Magalis, Anne–Mieke Vandamme, Simon Dellicour +31 more

Epidemiology and genetic diversity of SARS-CoV-2 lineages circulating in Africa

iScience(2022)10.1016/j.isci.2022.103880

Top 32%

0.617DataRank

Top 32%14 citations

Nicholas Israel Nii-Trebi, Abdulrokeeb Jakkari, Tosin Titus Olaniran, Tosin Yetunde Senbadejo, Anna Aba Kafintu-kwashie +11 more

Genomic Diversity of SARS-CoV-2 During Early Introduction into the United States National Capital Region

medRxiv(2020)10.1101/2020.08.13.20174136

N/A

0.416DataRank · unranked

15 citations

Shirlee Wohl, Thomas Mehoke, Srividya Ramakrishnan, Melanie Kirsche, Oluwaseun Falade‐Nwulia +17 more

Emergence of D1.1 reassortant H5N1 avian influenza viruses in North America

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.64898/2025.12.19.695329

N/A

0.312DataRank · unranked

7 citations

Nídia S. Trovão, Alexander Maksiaev, Guy Baele, Simon Dellicour, Martha I. Nelson +1 more

Contemporary and historical human migration patterns shape hepatitis B virus diversity

Virus Evolution(2024)10.1093/ve/veae009

N/A

0.292DataRank · unranked

6 citations

Marijn Thijssen, Nídia S. Trovão, Andrea-Clemencia Pineda-Peña, Marijke Reynders, Thomas Mina +9 more

Importance of De Novo Gene Evolution to Emerging Viral Threats: The ORF10 Strain-Restricted Orphan Gene of SARS-CoV-2 Promotes Pathogenesis

Molecular Biology and Evolution(2025)10.1093/molbev/msaf211

N/A

0.165DataRank · unranked

2 citations

Nídia S. Trovão, Joseph W. Guarnieri, Vincent S. Pan, Urminder Singh, Sergey Tsoy +14 more

Ecological divergence of wild birds drives avian influenza spillover and global spread

PLoS Pathogens(2022)10.1371/journal.ppat.1010062

N/A

0DataRank · unranked

138 citations

Mary Anne Bishop, Nídia S. Trovão, Katherine Ineson, Anne Schaefer, Wendy B. Puryear +9 more

A comprehensive SARS-CoV-2 and COVID-19 review, Part 1: Intracellular overdrive for SARS-CoV-2 infection

European Journal of Human Genetics(2022)10.1038/s41431-022-01108-8

N/A

0DataRank · unranked

81 citations

S Narayanan, Nídia S. Trovão, Joseph W. Guarnieri, Michael J. Topper, Pedro M. Moraes‐Vieira +5 more

The emergence and transmission dynamics of HIV-1 CRF07_BC in Mainland China

Virus Evolution(2022)10.1093/ve/veac014

N/A

0DataRank · unranked

16 citations

Yanping Li, Haizhou Liu, Nídia S. Trovão, Brian Foley, Xingguang Li

Insect-specific viruses in the Parvoviridae family: Genetic lineage characterization and spatiotemporal dynamics of the recently established Brevihamaparvovirus genus

Virus Research(2022)10.1016/j.virusres.2022.198728

N/A

0DataRank · unranked

13 citations

Nídia S. Trovão, Ana Abecasis, Ricardo Parreira, Paulo Morais

SARS-CoV-2 introductions and early dynamics of the epidemic in Portugal

Communications Medicine(2022)10.1038/s43856-022-00072-0

N/A

0DataRank · unranked

14 citations

Joana Isidro, Nídia S. Trovão, Sílvia Duarte, Helena Cortes Martins, Hugo Martiniano +95 more

Readdressing the genetic diversity and taxonomy of the Mesoniviridae family, as well as its relationships with other nidoviruses and putative mesonivirus-like viral sequences

Virus Research(2022)10.1016/j.virusres.2022.198727

N/A

0DataRank · unranked

3 citations

Nídia S. Trovão, Ana Abecasis, Ricardo Parreira, Paulo Morais

SARS-CoV-2 antibody prevalence in a pediatric cohort of unvaccinated children in Mérida, Yucatán, México

PLOS Global Public Health(2022)10.1371/journal.pgph.0000354

N/A

0DataRank · unranked

1 citations

Oscar D. Kirstein, Henry Puerta‐Guardo, Gloria Abigail Barrera-Fuentes, Desiree Ortegòn-Abud, Azael Che‐Mendoza +11 more

Evolution of influenza A virus hemagglutinin H1 and H3 across host species

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.20.488870

N/A

0DataRank · unranked

5 citations

Sairah Khan, Philippe Lemey, Martha I. Nelson, Joshua L. Cherry, Nídia S. Trovão

Multiple-trait subsampling for optimized ancestral trait reconstruction

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.11.511762

N/A

0DataRank · unranked

0 citations

Nídia S. Trovão, Joel O. Wertheim, Guy Baele, Adriano de Bernardi Schneider, Xingguang Li

Core mitochondrial genes are down-regulated during SARS-CoV-2 infection of rodent and human hosts

Science Translational Medicine(2023)10.1126/scitranslmed.abq1533

N/A

0DataRank · unranked

186 citations

Joseph M. Dybas, Hossein Fazelinia, Man S. Kim, Justin J. Frere, Yuanchao Zhang +46 more

Sequential viral introductions and spread of BA.1 across Pakistan provinces during the Omicron wave

BMC Genomics(2023)10.1186/s12864-023-09539-3

N/A

0DataRank · unranked

16 citations

Javaria Ashraf, Akbar Kanji, Yusra Abdul Rahman, Nídia S. Trovão, Peter Thielen +12 more

Comparative evolution of influenza A virus H1 and H3 head and stalk domains across host species

mBio(2023)10.1128/mbio.02649-23

N/A

0DataRank · unranked

8 citations

Sairah Khan, Philippe Lemey, Martha I. Nelson, Joshua L. Cherry, Nídia S. Trovão

Accelerating Bayesian inference of dependency between mixed-type biological traits

PLoS Computational Biology(2023)10.1371/journal.pcbi.1011419

N/A

0DataRank · unranked

6 citations

Akihiko Nishimura, Nídia S. Trovão, Joshua L. Cherry, Andrew J. Holbrook, Xiang Ji +3 more

Optimizing ancestral trait reconstruction of large HIV Subtype C datasets through multiple-trait subsampling

Virus Evolution(2023)10.1093/ve/vead069

N/A

0DataRank · unranked

5 citations

Nídia S. Trovão, Joel O. Wertheim, Guy Baele, Adriano de Bernardi Schneider, Xingguang Li

Evolutionary and spatiotemporal analyses reveal multiple introductions and cryptic transmission of SARS-CoV-2 VOC/VOI in Malta

Microbiology Spectrum(2023)10.1128/spectrum.01539-23

N/A

0DataRank · unranked

5 citations

Vincent S. Pan, Chirag Goel, Pilar Gallego‐García, Yunxi Liu, Christopher Barbara +11 more

SARS-CoV-2 Orphan Gene ORF10 Contributes to More Severe COVID-19 Disease

medRxiv(2023)10.1101/2023.11.27.23298847

N/A

0DataRank · unranked

10 citations

Nídia S. Trovão, Joseph W. Guarnieri, Pan Vincent, Urminder Singh, Sergey Tsoy +14 more

Lethal COVID-19 Associates With RAAS-Induced Inflammation For Multiple Organ Damage Including Mediastinal Lymph Nodes

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.08.561395

N/A

0DataRank · unranked

6 citations

Michael J. Topper, Katherine Beigel, Jeffrey Haltom, Amy Chadburn, Justin J. Frere +56 more

Sequential viral introductions and spread of BA.1 drove the Omicron wave across Pakistani provinces

medRxiv(2023)10.1101/2023.03.25.23287718

N/A

0DataRank · unranked

2 citations

Javaria Ashraf, Akbar Kanji, Yusra Abdul Rahman, Nídia S. Trovão, Peter Thielen +12 more

Synchrony of Bird Migration with Global Dispersal of Avian Influenza Reveals Exposed Bird Orders

Nature Communications(2024)10.1038/s41467-024-45462-1

N/A

0DataRank · unranked

47 citations

W Ben, Philippe Lemey, Lü Dong, Tong Mu, R. Alex Wiebe +15 more

Integrating dynamical modeling and phylogeographic inference to characterize global influenza circulation

PNAS Nexus(2024)10.1093/pnasnexus/pgae561

N/A

0DataRank · unranked

4 citations

Emanuele Gustani‐Buss, Trevor Bedford, Marc A. Suchard, Nídia S. Trovão, Andrew Rambaut +4 more

The evolutionary and transmission dynamics of HIV-1 CRF08_BC

PLoS ONE(2024)10.1371/journal.pone.0310027

N/A

0DataRank · unranked

1 citations

Nídia S. Trovão, Xingguang Li

Whole genome sequencing and transmission analysis of Vibrio cholerae isolates from Eastern and Southern Africa: a genomic epidemiology study

medRxiv(2024)10.1101/2024.03.28.24302717

N/A

0DataRank · unranked

8 citations

Ahmed Abade, Waqo Boru, Watipaso Kasambara, John Mwaba, Francis Ongole +17 more

Genomic diversity of SARS-CoV-2 during early introduction into the Baltimore-Washington metropolitan area

UNC Libraries(2024)10.17615/zsg3-yd09

N/A

0DataRank · unranked

0 citations

Winston Timp, Heba H. Mostafa, Craig Howser, Amanda Ernlund, Yunping Fan +17 more

Molecular evolutionary insights into the repeated introductions and cryptic transmission of dengue virus in Saudi Arabia

Journal of Infection(2025)10.1016/j.jinf.2025.106608

N/A

0DataRank · unranked

3 citations

Zainab BuAli, Nídia S. Trovão, Safia Aljedani, Abdullah Algaissi, Khalid J. Shrwani +5 more

Evolutionary trajectory and spread of respiratory syncytial virus group A in neonatal cohorts in Pakistan amidst the COVID-19 pandemic

Scientific Reports(2025)10.1038/s41598-025-87332-w

N/A

0DataRank · unranked

3 citations

Nídia S. Trovão, Julia E. Paoli, Abdul Ahad, Nazish Badar, Uzma Bashir Aamir +3 more

Editorial: Epidemiology and control of blood-borne viruses in low- and middle-income countries: genomic insights and public health strategies

Frontiers in Virology(2025)10.3389/fviro.2025.1696495

N/A

0DataRank · unranked

1 citations

Sana Tamim, Marceline Djuidje Ngounoue, Nídia S. Trovão

A scalable maximum-likelihood framework for near-real-time monitoring of MERS-CoV evolutionary and zoonotic dynamics

Microbiology Spectrum(2025)10.1128/spectrum.02673-25

N/A

0DataRank · unranked

0 citations

Xiaoyu Yu, Qing Nie, Darren P. Martin, Quan Gu, Nídia S. Trovão +1 more

When Pigs Fly: Pandemic influenza enters the 21st century

PLoS Pathogens(2020)10.1371/journal.ppat.1008259

N/A

0DataRank · unranked

34 citations

Martha I. Nelson, Nídia S. Trovão

Beyond clinical trials: Evolutionary and epidemiological considerations for development of a universal influenza vaccine

PLoS Pathogens(2020)10.1371/journal.ppat.1008583

N/A

0DataRank · unranked

35 citations

Katelyn M. Gostic, Martha I. Nelson, Graeme E. Price, Amanda C. Perofsky, Kaiyuan Sun +5 more

Genomic diversity of SARS-CoV-2 during early introduction into the Baltimore–Washington metropolitan area

JCI Insight(2021)10.1172/jci.insight.144350

N/A

0DataRank · unranked

41 citations

Shirlee Wohl, Thomas Mehoke, Srividya Ramakrishnan, Melanie Kirsche, Oluwaseun Falade‐Nwulia +17 more

Genetic and evolutionary analysis of SARS-CoV-2 circulating in the region surrounding Islamabad, Pakistan

Infection Genetics and Evolution(2021)10.1016/j.meegid.2021.105003

N/A

0DataRank · unranked

10 citations

Nídia S. Trovão, Peter Thielen, Tom Mehoke, Brian Merritt, Aamer Ikram +7 more

Genetic lineage characterization and spatiotemporal dynamics of classical insect-specific flaviviruses: outcomes and limitations

Virus Research(2021)10.1016/j.virusres.2021.198507

N/A

0DataRank · unranked

1 citations

Nídia S. Trovão, Ana Abecasis, Ricardo Parreira, Paulo Morais

Epidemiology and genetic diversity of SARS-CoV-2 lineages circulating in Africa

medRxiv(2021)10.1101/2021.05.17.21257341

N/A

0DataRank · unranked

3 citations

Nicholas Israel Nii-Trebi, Abdulrokeeb Jakkari, Tosin Titus Olaniran, Tosin Yetunde Senbadejo, Anna Aba Kafintu-kwashie +11 more

Nídia S. Trovão

Indexed papers

Top data-sharing exemplar

Papers