🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Maria Colomé‐Tatché

Helmholtz Zentrum München

ORCID: 0000-0002-2224-7560

Also affiliated with Technical University of Munich, Ludwig-Maximilians-Universität München

Biochemistry, Genetics and Molecular BiologyAgricultural and Biological SciencesComputer Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
9.5Author DataRank

Indexed papers

10in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 10 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Benchmarking atlas-level data integration in single-cell genomics

Nature Methods(2021)10.1038/s41592-021-01336-8
Top 3%
6.5DataRank
Top 3%1462 citations

Maren Büttner, Kridsadakorn Chaichoompu, M. F. Mueller, Fabian Joachim Theis, Anna Danese +7 more

Papers

Driven by 19 papers — median percentile 0. Top paper: “Benchmarking atlas-level data integration in single-cell genomics”.

Benchmarking atlas-level data integration in single-cell genomics

Nature Methods(2021)10.1038/s41592-021-01336-8
Top 3%
6.5DataRank
Top 3%1462 citations

Maren Büttner, Kridsadakorn Chaichoompu, M. F. Mueller, Fabian Joachim Theis, Anna Danese +7 more

Benchmarking atlas-level data integration in single-cell genomics

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.22.111161
N/A
5.3DataRank · unranked
122 citations

Maren Büttner, Kridsadakorn Chaichoompu, Marta Interlandi, Michaela Müller, Daniel Strobl +6 more

A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa

Genome biology(2020)10.1186/s13059-020-02162-5
Top 8%
2.9DataRank
Top 8%151 citations

Johanna Denkena, Maria Colomé‐Tatché, Yadollah Shahryary, Rashmi R. Hazarika, Jane Grimwood +20 more

EpiScanpy: integrated single-cell epigenomic analysis

bioRxiv (Cold Spring Harbor Laboratory)(2019)10.1101/648097
N/A
1.6DataRank · unranked
30 citations

David S. Fischer, Fabian Joachim Theis, Maria Colomé‐Tatché, Maria Lucia Richter, Anna Danese

Integrative Analysis of MicroRNA and mRNA Data Reveals an Orchestrated Function of MicroRNAs in Skeletal Myocyte Differentiation in Response to TNF-α or IGF1

PLOS ONE(2015)10.1371/journal.pone.0135284
N/A
1.1DataRank · unranked
24 citations

Steffen Sass, Nikola S. Mueller, Stefan Krebs, Stefan Bauersachs, Sebastian Kaiser +6 more

Swarm Learning for decentralized and confidential clinical machine learning

Nature(2021)10.1038/s41586-021-03583-3
N/A
1.0DataRank · unranked
821 citations

Hartmut Schultze, Krishnaprasad Lingadahalli Shastry, Sathyanarayanan Manamohan, Saikat Mukherjee, Vishesh Garg +183 more

Statistical single cell multi-omics integration

Current Opinion in Systems Biology(2018)10.1016/j.coisb.2018.01.003
N/A
0.624DataRank · unranked
63 citations

Maria Colomé‐Tatché, Fabian Joachim Theis

Path-based reasoning for biomedical knowledge graphs with BioPathNet

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.06.17.599219
N/A
0.289DataRank · unranked
5 citations

Svitlana Oleshko, Samuele Firmani, Zhaocheng Zhu, Hui Cheng, Maria A. Ulmer +6 more

BioPathNet: Enhancing Link Prediction in Biomedical Knowledge Graphs through Path Representation Learning

Research Square(2024)10.21203/rs.3.rs-5057842/v1
N/A
0.165DataRank · unranked
2 citations

Yue Hu, Svitlana Oleshko, Samuele Firmani, Zhaocheng Zhu, Hui Cheng +6 more

Benchmarking atlas-level data integration in single-cell genomics - integration task datasets

Figshare(2020)10.6084/m9.figshare.12420968.v7
Top 78%
0.104DataRank
Top 78%1 citations

Maren Büttner, Anna Danese, Marta Interlandi, Michaela Müller, Daniel Strobl +6 more

Benchmarking atlas-level data integration in single-cell genomics - integration task datasets (Immune, lung, and pancreas)

Figshare(2020)10.6084/m9.figshare.12420968.v3
Top 100%
0DataRank
Top 100%0 citations

Maren Büttner, Kridsadakorn Chaichoompu, Anna Danese, Marta Interlandi, Michaela Müller +6 more

Benchmarking atlas-level data integration in single-cell genomics - integration task datasets (Immune and pancreas)

Figshare(2020)10.6084/m9.figshare.12420968.v2
Top 100%
0DataRank
Top 100%0 citations

Maren Büttner, Kridsadakorn Chaichoompu, Anna Danese, Marta Interlandi, Michaela Müller +6 more

EpiScanpy: integrated single-cell epigenomic analysis

Zenodo (CERN European Organization for Nuclear Research)(2020)10.5281/zenodo.4292082
Top 100%
0DataRank
Top 100%0 citations

Maria Lucia Richter, Kridsadakorn Chaichoompu, David S. Fischer, Fabian Joachim Theis, Maria Colomé‐Tatché +1 more

EpiScanpy: integrated single-cell epigenomic analysis

Zenodo (CERN European Organization for Nuclear Research)(2020)10.5281/zenodo.4292081
Top 100%
0DataRank
Top 100%0 citations

Maria Lucia Richter, Kridsadakorn Chaichoompu, David S. Fischer, Fabian Joachim Theis, Maria Colomé‐Tatché +1 more

Brief homogeneous TCR signals instruct common iNKT progenitors whose effector diversification is characterized by subsequent cytokine signaling

Immunity(2021)10.1016/j.immuni.2021.09.003
N/A
0DataRank · unranked
35 citations

Nyambayar Dashtsoodol, Thomas Engleitner, Christoph Drees, Sabine Helmrath, Jonas Mir +12 more

A compendium of Amplification-Related Gain Of Sensitivity (ARGOS) genes in human cancer

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.16.571980
N/A
0DataRank · unranked
2 citations

Michaël Schubert, Nicholas Khuu, Maria F. Suárez Peredo Rodríguez, Kaimeng Huang, Michelle Swift +21 more

Benchmarking atlas-level data integration in single-cell genomics - integration task datasets (Immune and pancreas)

Figshare(2020)10.6084/m9.figshare.12420968.v1
Top 100%
0DataRank
Top 100%0 citations

Maren Büttner, Kridsadakorn Chaichoompu, Anna Danese, Marta Interlandi, Michaela Müller +6 more

Benchmarking atlas-level data integration in single-cell genomics - integration task datasets

Figshare(2020)10.6084/m9.figshare.12420968.v4
Top 100%
0DataRank
Top 100%0 citations

Maren Büttner, Anna Danese, Marta Interlandi, Michaela Müller, Daniel Strobl +6 more

Benchmarking atlas-level data integration in single-cell genomics - integration task datasets

Figshare(2020)10.6084/m9.figshare.12420968.v5
Top 100%
0DataRank
Top 100%0 citations

Maren Büttner, Anna Danese, Marta Interlandi, Michaela Müller, Daniel Strobl +6 more