Juexin Wang

Also affiliated with Zhejiang University of Technology, Indiana University – Purdue University Indianapolis

Biochemistry, Genetics and Molecular BiologyAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 24 papers. Top paper: “Single-cell biological network inference using a heterogeneous graph transformer”.

Single-cell biological network inference using a heterogeneous graph transformer

Nature Communications(2023)10.1038/s41467-023-36559-0

N/A

3.5DataRank · unranked

186 citations

Xiaoying Wang, Jingxian Li, Cankun Wang, Tong Xiao, Yuntao Liu +15 more

Define and visualize pathological architectures of human tissues from spatially resolved transcriptomics using deep learning

Computational and Structural Biotechnology Journal(2022)10.1016/j.csbj.2022.08.029

N/A

0.598DataRank · unranked

53 citations

Fei He, Juexin Wang, Shuo Chen, Jingyi Li, Jixin Liu +14 more

Dimension-agnostic and granularity-based spatially variable gene identification

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.21.533713

N/A

0.337DataRank · unranked

4 citations

Jinpu Li, Skyler T. Kramer, Li Su, Yuzhou Chang, Chunhui Xu +3 more

Detecting Cancer Survival Related Gene Markers Based on Rectified Factor Network

Frontiers in Bioengineering and Biotechnology(2020)10.3389/fbioe.2020.00349

N/A

0DataRank · unranked

4 citations

Guixia Liu, Juexin Wang, Jianjiong Gao, Dong Xu, Lingtao Su

Inductive Inference of Gene Regulatory Network Using Supervised and Semi-supervised Graph Neural Networks

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.27.315382

N/A

0DataRank · unranked

2 citations

Anjun Ma, Qin Ma, Dong Xu, Trupti Joshi, Juexin Wang

scGNN is a novel graph neural network framework for single-cell RNA-Seq analyses

Nature Communications(2021)10.1038/s41467-021-22197-x

N/A

0DataRank · unranked

464 citations

Anjun Ma, Yuzhou Chang, Jianting Gong, Yuexu Jiang, Ren Qi +5 more

The adeno-associated virus 2 genome and Rep 68/78 proteins interact with cellular sites of DNA damage

Human Molecular Genetics(2021)10.1093/hmg/ddab300

N/A

0DataRank · unranked

21 citations

Fawn B. Whittle, Juexin Wang, Phoenix M. Shepherd, Lisa Burger, Kevin A. Kaifer +5 more

Define and visualize pathological architectures of human tissues from spatially resolved transcriptomics using deep learning

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.08.451210

N/A

0DataRank · unranked

12 citations

Fei He, Juexin Wang, Shuo Chen, Jingyi Li, Jixin Liu +14 more

Neural relational inference to learn allosteric long-range interactions in proteins from molecular dynamics simulations

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.20.427459

N/A

0DataRank · unranked

3 citations

Juexin Wang, Weiwei Han, Dong Xu, Jingxuan Zhu

Neural relational inference to learn allosteric long-range interactions in proteins from molecular dynamics simulations

Research Square(2021)10.21203/rs.3.rs-219933/v1

N/A

0DataRank · unranked

1 citations

Juexin Wang, Weiwei Han, Dong Xu, Jingxuan Zhu

Neural relational inference to learn long-range allosteric interactions in proteins from molecular dynamics simulations

Nature Communications(2022)10.1038/s41467-022-29331-3

N/A

0DataRank · unranked

130 citations

Juexin Wang, Weiwei Han, Dong Xu, Jingxuan Zhu

scGNN 2.0: a graph neural network tool for imputation and clustering of single-cell RNA-Seq data

Bioinformatics(2022)10.1093/bioinformatics/btac684

N/A

0DataRank · unranked

26 citations

Hao Cheng, Anjun Ma, Yang Li, Juexin Wang, Dong Xu +2 more

Prediction of protein stability changes upon single-point variant using 3D structure profile

Computational and Structural Biotechnology Journal(2022)10.1016/j.csbj.2022.12.008

N/A

0DataRank · unranked

20 citations

Juexin Wang, Xizeng Zong, Zhiqiang Ma, Dong Xu, Jianting Gong

Dimension-agnostic and granularity-based spatially variable gene identification using BSP

Nature Communications(2023)10.1038/s41467-023-43256-5

N/A

0DataRank · unranked

31 citations

Jinpu Li, Skyler T. Kramer, Li Su, Yuzhou Chang, Chunhui Xu +5 more

Dimension-agnostic and granularity-based spatially variable gene identification

(2023)10.21203/rs.3.rs-2687726/v1

N/A

0DataRank · unranked

0 citations

Jinpu Li, Skyler T. Kramer, Li Su, Yuzhou Chang, Chunhui Xu +3 more

scGNN+: Adapting ChatGPT for Seamless Tutorial and Code Optimization

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.30.615735

N/A

0DataRank · unranked

1 citations

Shuang Wang, Shaohong Feng, Cankun Wang, Weidong Wu, Xiaopei Huang +4 more

CrossMP: Enabling Cross-Modality Translation between Single-Cell RNA-Seq and Single-Cell ATAC-Seq through Web-Based Portal

Genes(2024)10.3390/genes15070882

N/A

0DataRank · unranked

0 citations

Sabin Dahal, Shuai Zeng, Juexin Wang, Dong Xu, Trupti Joshi +1 more

scBSP: a fast and accurate tool for identifying spatially variable features from high-resolution spatial omics data

Bioinformatics(2025)10.1093/bioinformatics/btaf554

N/A

0DataRank · unranked

2 citations

Mauminah Raina, Yiqing Wang, Chunhui Xu, Li Su, Qi Guo +6 more

Relation equivariant graph neural networks to explore the mosaic-like tissue architecture of kidney diseases on spatially resolved transcriptomics

Bioinformatics(2025)10.1093/bioinformatics/btaf303

N/A

0DataRank · unranked

2 citations

Hao Cheng, Ricardo Melo Ferreira, Treyden Stansfield, Chandrima Modak, Ying-Hua Cheng +6 more

FUSION: a web-based application for in-depth exploration of multi-omics data with brightfield histology

Nature Communications(2025)10.1038/s41467-025-63050-9

N/A

0DataRank · unranked

1 citations

Ricardo Melo Ferreira, Nicholas Lucarelli, Suhas Katari Chaluva Kumar, Anindya S. Paul, David Manthey +21 more

Inductive inference of gene regulatory network using supervised and semi-supervised graph neural networks

Computational and Structural Biotechnology Journal(2020)10.1016/j.csbj.2020.10.022

N/A

0DataRank · unranked

83 citations

Anjun Ma, Qin Ma, Dong Xu, Trupti Joshi, Juexin Wang

TrimNN: Characterizing cellular community motifs for studying multicellular topological organization in complex tissues

Research Square(2025)10.21203/rs.3.rs-5584635/v1

N/A

0DataRank · unranked

0 citations

Yang Yu, Shuang Wang, Jinpu Li, Meichen Yu, Kyle McCrocklin +5 more

Endoplasmic reticulum retention and degradation of a mutation in SLC6A1 associated with epilepsy and autism

Molecular Brain(2020)10.1186/s13041-020-00612-6

N/A

0DataRank · unranked

48 citations

Sarah Poliquin, Felicia Mermer, Jaclyn M. Eissman, Eric Delpire, Juexin Wang +11 more

The NS1 protein of the parvovirus MVM Aids in the localization of the viral genome to cellular sites of DNA damage

PLoS Pathogens(2020)10.1371/journal.ppat.1009002

N/A

0DataRank · unranked

41 citations

Maria Boftsi, Fawn B. Whittle, Juexin Wang, Matthew S. Fuller, Trupti Joshi +2 more