Lucas A. Salas

Also affiliated with Dartmouth Psychiatric Research Center

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

1.8Author DataRank

Indexed papers

26in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 26 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Navigating the Hydroxymethylome: Experimental Biases and Quality Control Tools for the Tandem Bisulfite and Oxidative Bisulfite Illumina Microarrays

Epigenomics(2022)10.2217/epi-2021-0490

Top 36%

0.535DataRank

Top 36%9 citations

Min Kyung Lee, Laurent Perreard, KARL T. KELSEY, Brock C. Christensen, Lucas A. Salas +1 more

Papers

Driven by 114 papers — median percentile 0. Top paper: “Enhanced cell deconvolution of peripheral blood using DNA methylation for high-resolution immune profiling”.

Enhanced cell deconvolution of peripheral blood using DNA methylation for high-resolution immune profiling

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.11.439377

N/A

1.2DataRank · unranked

23 citations

Ze Zhang, Devin C. Koestler, Rondi A. Butler, Helen M. Hansen, Annette M. Molinaro +4 more

Enrichment of CpG island shore region hypermethylation in epigenetic breast field cancerization

Epigenetics(2020)10.1080/15592294.2020.1747748

N/A

1.1DataRank · unranked

47 citations

Alexander J. Titus, Lucas A. Salas, Owen M. Wilkins, Chelsey Mullen, Kelly J. Gregory +7 more

Cord blood DNA methylation reflects cord blood C-reactive protein levels but not maternal levels: a longitudinal study and meta-analysis

Clinical Epigenetics(2020)10.1186/s13148-020-00852-2

N/A

0.773DataRank · unranked

33 citations

Weihua Guan, Xuehuo Zeng, Lucas A. Salas, Sunni L. Mumford, Paula de Prado-Bert +14 more

Navigating the Hydroxymethylome: Experimental Biases and Quality Control Tools for the Tandem Bisulfite and Oxidative Bisulfite Illumina Microarrays

Epigenomics(2022)10.2217/epi-2021-0490

Top 36%

0.535DataRank

Top 36%9 citations

Min Kyung Lee, Laurent Perreard, KARL T. KELSEY, Brock C. Christensen, Lucas A. Salas +1 more

Genome-Scale Methylation Analysis Identifies Immune Profiles and Age Acceleration Associations with Bladder Cancer Outcomes

Cancer Epidemiology Biomarkers & Prevention(2023)10.1158/1055-9965.epi-23-0331

Top 40%

0.480DataRank

Top 40%11 citations

Lucas A. Salas, John K. Wiencke, Devin C. Koestler, Annette M. Molinaro, ANGELINE S. ANDREW +5 more

Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

Cancer Epidemiology, Biomarkers & Prevention(2024)10.1158/1055-9965.epi-24-0113

Top 43%

0.432DataRank

Top 43%11 citations

Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Mixed Effects Machine Learning Models for Colon Cancer Metastasis Prediction using Spatially Localized Immuno-Oncology Markers

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.08.01.454649

N/A

0.345DataRank · unranked

9 citations

Carly A. Bobak, Mustafa Nasir-Moin, Eren M. Veziroglu, Scott Palisoul, Rachael E. Barney +5 more

Extensive epigenomic dysregulation is a hallmark of homologous recombination deficiency in triple‐negative breast cancer

International Journal of Cancer(2024)10.1002/ijc.35274

N/A

0.315DataRank · unranked

6 citations

Lucas A. Salas, Jonathan D. Marotti, Nicole P. Jenkins, Chao Cheng, Todd W. Miller +3 more

Identification of a foetal epigenetic compartment in adult human kidney

Epigenetics(2021)10.1080/15592294.2021.1900027

N/A

0.272DataRank · unranked

4 citations

Ze Zhang, Devin C. Koestler, Lucas A. Salas, Annette M. Molinaro, Brock C. Christensen +2 more

Enrichment of a neutrophil-like monocyte transcriptional state in glioblastoma myeloid suppressor cells

Research Square(2023)10.21203/rs.3.rs-3793353/v1

N/A

0.252DataRank · unranked

3 citations

Emily Nissen, Devin C. Koestler, Stanley Tamaki, Courtney Tamaki, Helen M. Hansen +12 more

Molecular subtypes of high-grade serous ovarian cancer across racial groups and gene expression platforms

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.01.565179

Top 61%

0.241DataRank

Top 61%4 citations

Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Homologous Recombination Deficiency and Survival in Ovarian High-Grade Serous Carcinoma by Self-Reported Race

Cancer Epidemiology Biomarkers & Prevention(2025)10.1158/1055-9965.epi-25-0762

N/A

0.165DataRank · unranked

2 citations

Courtney E. Johnson, Mollie E. Barnard, Natalie R. Davidson, Lindsay J. Collin, David A. Nix +9 more

Data from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

(2024)10.1158/1055-9965.c.7380196

Top 72%

0.118DataRank

Top 72%1 citations

Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

The Overlooked Role of Specimen Preparation in Bolstering Deep Learning-Enhanced Spatial Transcriptomics Workflows

medRxiv(2023)10.1101/2023.10.09.23296700

N/A

0.104DataRank · unranked

1 citations

Yunrui Lu, Alos Diallo, Gokul Raghavendra Srinivasan, Zarif Azher, Brock C. Christensen +8 more

Homologous Recombination Deficiency in Ovarian High-Grade Serous Carcinoma by Self-Reported Race

SSRN Electronic Journal(2025)10.2139/ssrn.5152286

N/A

0.104DataRank · unranked

1 citations

Courtney E. Johnson, Mollie E. Barnard, Lindsay J. Collin, David A. Nix, Chad D. Huff +10 more

Genomic Characterization of High-Grade Serous Ovarian Carcinoma Reveals Distinct Somatic Features in Black Individuals

Cancer Research(2025)10.1158/0008-5472.can-24-1879

N/A

0.104DataRank · unranked

1 citations

Jeffrey R. Marks, Lindsay J. Collin, David A. Nix, Natalie R. Davidson, Chad D. Huff +9 more

Supplementary Table S5 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

(2024)10.1158/1055-9965.26423551

Top 100%

0DataRank

Top 100%0 citations

Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplementary Figure S16 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

Figshare(2024)10.1158/1055-9965.26423596.v1

N/A

0DataRank · unranked

0 citations

Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplemental Table 8 from Genomic Characterization of High-Grade Serous Ovarian Carcinoma Reveals Distinct Somatic Features in Black Individuals

Figshare(2025)10.1158/0008-5472.28917754

N/A

0DataRank · unranked

0 citations

Jeffrey R. Marks, Lindsay J. Collin, David A. Nix, Natalie R. Davidson, Chad D. Huff +9 more

Supplementary Figure S14 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

(2024)10.1158/1055-9965.26423602

N/A

0DataRank · unranked

0 citations

Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplementary Figure S8 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

(2024)10.1158/1055-9965.26423572

N/A

0DataRank · unranked

0 citations

Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplementary Figure S1 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

Figshare(2024)10.1158/1055-9965.26423617.v1

N/A

0DataRank · unranked

0 citations

Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplementary Figure S4 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

Figshare(2024)10.1158/1055-9965.26423584.v1

N/A

0DataRank · unranked

0 citations

Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Homologous recombination deficiency in ovarian high-grade serous carcinoma by self-reported race

medRxiv(2025)10.1101/2025.01.21.25320918

N/A

0DataRank · unranked

0 citations

Courtney E. Johnson, Mollie E. Barnard, Lindsay J. Collin, David A. Nix, Chad Huff +9 more

Supplementary Figure S7 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

(2024)10.1158/1055-9965.26423575

N/A

0DataRank · unranked

0 citations

Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplementary Table S3 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

(2024)10.1158/1055-9965.26423557

Top 100%

0DataRank

Top 100%0 citations

Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplementary Table S10 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

(2024)10.1158/1055-9965.26423563

Top 100%

0DataRank

Top 100%0 citations

Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplementary Table 3 from Homologous Recombination Deficiency and Survival in Ovarian High-Grade Serous Carcinoma by Self-Reported Race

(2025)10.1158/1055-9965.30517304

N/A

0DataRank · unranked

0 citations

Courtney E. Johnson, Mollie E. Barnard, Natalie R. Davidson, Lindsay J. Collin, David A. Nix +9 more

Supplementary Figure S2 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

Figshare(2024)10.1158/1055-9965.26423593.v1

N/A

0DataRank · unranked

0 citations

Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplementary Figure S13 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

Figshare(2024)10.1158/1055-9965.26423605.v1

N/A

0DataRank · unranked

0 citations

Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplementary Figure S2 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

(2024)10.1158/1055-9965.26423593

N/A

0DataRank · unranked

0 citations

Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplementary Figure S12 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

(2024)10.1158/1055-9965.26423608

Top 100%

0DataRank

Top 100%0 citations

Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplementary Figure S11 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

Figshare(2024)10.1158/1055-9965.26423611.v1

Top 100%

0DataRank

Top 100%0 citations

Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplementary Figure S3 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

Figshare(2024)10.1158/1055-9965.26423590.v1

N/A

0DataRank · unranked

0 citations

Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplemental Table 6 from Genomic Characterization of High-Grade Serous Ovarian Carcinoma Reveals Distinct Somatic Features in Black Individuals

Figshare(2025)10.1158/0008-5472.28917760

N/A

0DataRank · unranked

0 citations

Jeffrey R. Marks, Lindsay J. Collin, David A. Nix, Natalie R. Davidson, Chad D. Huff +9 more

Data from Genomic Characterization of High-Grade Serous Ovarian Carcinoma Reveals Distinct Somatic Features in Black Individuals

(2025)10.1158/0008-5472.c.7798939

N/A

0DataRank · unranked

0 citations

Jeffrey R. Marks, Lindsay J. Collin, David A. Nix, Natalie R. Davidson, Chad D. Huff +9 more

Supplementary Table S5 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

Figshare(2024)10.1158/1055-9965.26423551.v1

Top 100%

0DataRank

Top 100%0 citations

Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplementary Figure S13 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

(2024)10.1158/1055-9965.26423605

N/A

0DataRank · unranked

0 citations

Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplemental Figure 3 from Genomic Characterization of High-Grade Serous Ovarian Carcinoma Reveals Distinct Somatic Features in Black Individuals

Figshare(2025)10.1158/0008-5472.28917790

N/A

0DataRank · unranked

0 citations

Jeffrey R. Marks, Lindsay J. Collin, David A. Nix, Natalie R. Davidson, Chad D. Huff +9 more

Supplemental Figure 7 from Genomic Characterization of High-Grade Serous Ovarian Carcinoma Reveals Distinct Somatic Features in Black Individuals

Figshare(2025)10.1158/0008-5472.28917778

N/A

0DataRank · unranked

0 citations

Jeffrey R. Marks, Lindsay J. Collin, David A. Nix, Natalie R. Davidson, Chad D. Huff +9 more

Supplementary Figure 3 from Homologous Recombination Deficiency and Survival in Ovarian High-Grade Serous Carcinoma by Self-Reported Race

Figshare(2025)10.1158/1055-9965.30517313

N/A

0DataRank · unranked

0 citations

Courtney E. Johnson, Mollie E. Barnard, Natalie R. Davidson, Lindsay J. Collin, David A. Nix +9 more

Supplementary Figure S7 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

Figshare(2024)10.1158/1055-9965.26423575.v1

N/A

0DataRank · unranked

0 citations

Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplemental Table 9 from Genomic Characterization of High-Grade Serous Ovarian Carcinoma Reveals Distinct Somatic Features in Black Individuals

Figshare(2025)10.1158/0008-5472.28917751

N/A

0DataRank · unranked

0 citations

Jeffrey R. Marks, Lindsay J. Collin, David A. Nix, Natalie R. Davidson, Chad D. Huff +9 more

Supplementary Table S10 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

Figshare(2024)10.1158/1055-9965.26423563.v1

Top 100%

0DataRank

Top 100%0 citations

Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplementary Figure 2 from Homologous Recombination Deficiency and Survival in Ovarian High-Grade Serous Carcinoma by Self-Reported Race

Figshare(2025)10.1158/1055-9965.30517319

N/A

0DataRank · unranked

0 citations

Courtney E. Johnson, Mollie E. Barnard, Natalie R. Davidson, Lindsay J. Collin, David A. Nix +9 more

Supplementary Table S7 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

Figshare(2024)10.1158/1055-9965.26423545.v1

Top 100%

0DataRank

Top 100%0 citations

Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplementary Table S8 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

Figshare(2024)10.1158/1055-9965.26423542.v1

Top 100%

0DataRank

Top 100%0 citations

Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplementary Figure S9 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

(2024)10.1158/1055-9965.26423569

N/A

0DataRank · unranked

0 citations

Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplemental Table 3 from Genomic Characterization of High-Grade Serous Ovarian Carcinoma Reveals Distinct Somatic Features in Black Individuals

Figshare(2025)10.1158/0008-5472.28917769

N/A

0DataRank · unranked

0 citations

Jeffrey R. Marks, Lindsay J. Collin, David A. Nix, Natalie R. Davidson, Chad D. Huff +9 more

Supplemental Figure 5 from Genomic Characterization of High-Grade Serous Ovarian Carcinoma Reveals Distinct Somatic Features in Black Individuals

Figshare(2025)10.1158/0008-5472.28917784

N/A

0DataRank · unranked

0 citations

Jeffrey R. Marks, Lindsay J. Collin, David A. Nix, Natalie R. Davidson, Chad D. Huff +9 more

Supplementary Figure S5 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

Figshare(2024)10.1158/1055-9965.26423581.v1

N/A

0DataRank · unranked

0 citations

Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplementary Table S9 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

Figshare(2024)10.1158/1055-9965.26423539.v1

Top 100%

0DataRank

Top 100%0 citations

Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplemental Table 4 from Genomic Characterization of High-Grade Serous Ovarian Carcinoma Reveals Distinct Somatic Features in Black Individuals

Figshare(2025)10.1158/0008-5472.28917766

N/A

0DataRank · unranked

0 citations

Jeffrey R. Marks, Lindsay J. Collin, David A. Nix, Natalie R. Davidson, Chad D. Huff +9 more

Supplementary Table S6 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

Figshare(2024)10.1158/1055-9965.26423548.v1

Top 100%

0DataRank

Top 100%0 citations

Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplementary Figure 1 from Homologous Recombination Deficiency and Survival in Ovarian High-Grade Serous Carcinoma by Self-Reported Race

Figshare(2025)10.1158/1055-9965.30517322

N/A

0DataRank · unranked

0 citations

Courtney E. Johnson, Mollie E. Barnard, Natalie R. Davidson, Lindsay J. Collin, David A. Nix +9 more

Supplementary Figure S10 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

Figshare(2024)10.1158/1055-9965.26423614.v1

N/A

0DataRank · unranked

0 citations

Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplementary Figure S8 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

Figshare(2024)10.1158/1055-9965.26423572.v1

N/A

0DataRank · unranked

0 citations

Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplementary Figure S15 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

(2024)10.1158/1055-9965.26423599

N/A

0DataRank · unranked

0 citations

Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplementary Figure S15 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

Figshare(2024)10.1158/1055-9965.26423599.v1

N/A

0DataRank · unranked

0 citations

Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplemental Table 2 from Genomic Characterization of High-Grade Serous Ovarian Carcinoma Reveals Distinct Somatic Features in Black Individuals

Figshare(2025)10.1158/0008-5472.28917772

N/A

0DataRank · unranked

0 citations

Jeffrey R. Marks, Lindsay J. Collin, David A. Nix, Natalie R. Davidson, Chad D. Huff +9 more

MethylNet: an automated and modular deep learning approach for DNA methylation analysis

BMC Bioinformatics(2020)10.1186/s12859-020-3443-8

N/A

0DataRank · unranked

134 citations

Alexander J. Titus, Curtis L. Petersen, Youdinghuan Chen, Lucas A. Salas, Brock C. Christensen +1 more

DNA methylation and body mass index from birth to adolescence: meta-analyses of epigenome-wide association studies

Genome Medicine(2020)10.1186/s13073-020-00810-w

N/A

0DataRank · unranked

100 citations

Leanne K. Küpers, Gemma C. Sharp, Lucas A. Salas, Samantha Lent, Dereje D. Jima +80 more

MethylSPWNet and MethylCapsNet: Biologically Motivated Organization of DNAm Neural Network, Inspired by Capsule Networks

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.14.251306

N/A

0DataRank · unranked

2 citations

Youdinghuan Chen, Nasim Azizgolshani, Curtis L. Petersen, Alexander J. Titus, Erika L. Moen +4 more

DNA hypohydroxymethylation in pediatric central nervous system tumors is associated with CTCF binding sites and reduced survival

medRxiv(2020)10.1101/2020.06.20.20136184

N/A

0DataRank · unranked

1 citations

Curtis L. Petersen, Youdinghuan Chen, Lucas A. Salas, Laurent Perreard, Lananh Nguyen +2 more

MethylSPWNet and MethylCapsNet: Biologically Motivated Organization of DNAm Neural Networks, Inspired by Capsule Networks

npj Systems Biology and Applications(2021)10.1038/s41540-021-00193-7

N/A

0DataRank · unranked

25 citations

Youdinghuan Chen, Nasim Azizgolshani, Curtis L. Petersen, Alexander J. Titus, Erika L. Moen +4 more

Genome-Scale DNA Methylation Analysis Identifies Repeat Element Alterations that Modulate the Genomic Stability of Melanocytic Nevi

Journal of Investigative Dermatology(2021)10.1016/j.jid.2021.11.025

N/A

0DataRank · unranked

24 citations

Drew T. Bergman, Lucas A. Salas, Lisa N. Tom, Jean-Marie Tan, Antonia Laino +7 more

DNA 5-hydroxymethylcytosine in pediatric central nervous system tumors may impact tumor classification and is a positive prognostic marker

Clinical Epigenetics(2021)10.1186/s13148-021-01156-9

N/A

0DataRank · unranked

20 citations

Curtis L. Petersen, Youdinghuan Chen, Joshua Levy, Lucas A. Salas, Laurent Perreard +3 more

Interactions of Age and Blood Immune Factors and Noninvasive Prediction of Glioma Survival

JNCI Journal of the National Cancer Institute(2021)10.1093/jnci/djab195

N/A

0DataRank · unranked

19 citations

John K. Wiencke, Gayathri Warrier, Devin C. Koestler, Pranathi Chunduru, Ji Yoon Lee +13 more

Enhanced cell deconvolution of peripheral blood using DNA methylation for high-resolution immune profiling

Nature Communications(2022)10.1038/s41467-021-27864-7

N/A

0DataRank · unranked

283 citations

Ze Zhang, Devin C. Koestler, Rondi A. Butler, Helen M. Hansen, Annette M. Molinaro +4 more

HiTIMED: hierarchical tumor immune microenvironment epigenetic deconvolution for accurate cell type resolution in the tumor microenvironment using tumor-type-specific DNA methylation data

Journal of Translational Medicine(2022)10.1186/s12967-022-03736-6

N/A

0DataRank · unranked

43 citations

John K. Wiencke, KARL T. KELSEY, Devin C. Koestler, Brock C. Christensen, Lucas A. Salas +1 more

Immune profiles and DNA methylation alterations related with non-muscle-invasive bladder cancer outcomes

Clinical Epigenetics(2022)10.1186/s13148-022-01234-6

N/A

0DataRank · unranked

26 citations

Lucas A. Salas, John K. Wiencke, Devin C. Koestler, Annette M. Molinaro, ANGELINE S. ANDREW +5 more

DNA methylation as a pharmacodynamic marker of glucocorticoid response and glioma survival

Nature Communications(2022)10.1038/s41467-022-33215-x

N/A

0DataRank · unranked

21 citations

Annette M. Molinaro, Gayathri Warrier, Terri Rice, Jennifer Clarke, Jennie Taylor +14 more

Umbilical cord blood immune cell profiles in relation to the infant gut microbiome

iScience(2022)10.1016/j.isci.2022.105833

N/A

0DataRank · unranked

5 citations

Lucas A. Salas, Jie Zhou, Emily Baker, Anne G. Hoen, Todd M. Everson +5 more

Evaluation of cross-platform compatibility of a DNA methylation-based glucocorticoid response biomarker

Clinical Epigenetics(2022)10.1186/s13148-022-01352-1

N/A

0DataRank · unranked

3 citations

John K. Wiencke, Gayathri Warrier, Helen M. Hansen, Lucie McCoy, Terri Rice +10 more

Development of biologically interpretable multimodal deep learning model for cancer prognosis prediction

Proceedings of the 37th ACM/SIGAPP Symposium on Applied Computing(2022)10.1145/3477314.3507032

N/A

0DataRank · unranked

16 citations

Louis Vaickus, Lucas A. Salas, Brock C. Christensen, Joshua Levy, Zarif Azher

Assessment of Emerging Pretraining Strategies in Interpretable Multimodal Deep Learning for Cancer Prognostication

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.21.517440

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2 citations

Anish Suvarna, Ji‐Qing Chen, Ze Zhang, Brock C. Christensen, Lucas A. Salas +3 more

Identification of Spatial Proteomic Signatures of Colon Tumor Metastasis: A Digital Spatial Profiling Approach

medRxiv(2022)10.1101/2022.12.04.22283073

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2 citations

John P. Zavras, Eren M. Veziroglu, Mustafa Nasir-Moin, Fred Kolling, Brock C. Christensen +10 more

Hypertension Impacts Peripheral Blood Leukocyte Composition

Hypertension(2022)10.1161/hypertensionaha.122.20422

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1 citations

KARL T. KELSEY, Lucas A. Salas

Inferring Spatially Resolved Transcriptomics Data from Whole Slide Images for the Assessment of Colorectal Tumor Metastasis: A Feasibility Study

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.24.517856

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0 citations

Eric Feng, Cyril Sharma, Zarif Azher, Tarushii Goel, Ojas A. Ramwala +10 more

Inferring spatial transcriptomics markers from whole slide images to characterize metastasis-related spatial heterogeneity of colorectal tumors: A pilot study

Journal of Pathology Informatics(2023)10.1016/j.jpi.2023.100308

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23 citations

Eric Feng, Cyril Sharma, Zarif Azher, Tarushii Goel, Ojas A. Ramwala +10 more

Identification of Spatial Proteomic Signatures of Colon Tumor Metastasis

American Journal Of Pathology(2023)10.1016/j.ajpath.2023.02.020

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21 citations

John P. Zavras, Eren M. Veziroglu, Mustafa Nasir-Moin, Fred Kolling, Brock C. Christensen +10 more

Assessment of emerging pretraining strategies in interpretable multimodal deep learning for cancer prognostication

BioData Mining(2023)10.1186/s13040-023-00338-w

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19 citations

Anish Suvarna, Jiqing Chen, Ze Zhang, Brock C. Christensen, Lucas A. Salas +3 more

Assessment of immune cell profiles among post-menopausal women in the Women’s Health Initiative using DNA methylation-based methods

Clinical Epigenetics(2023)10.1186/s13148-023-01488-8

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15 citations

Alex P. Reiner, Simin Liu, Robert B. Wallace, Annette M. Molinaro, Lucas A. Salas +5 more

Application of Novel Breast Biospecimen Cell-Type Adjustment Identifies Shared DNA Methylation Alterations in Breast Tissue and Milk with Breast Cancer–Risk Factors

Cancer Epidemiology Biomarkers & Prevention(2023)10.1158/1055-9965.epi-22-0405

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14 citations

Connolly D. Carroll, Lucas A. Salas, MARGARET R. KARAGAS, Brock C. Christensen, Meghan E. Muse

Potential to Enhance Large Scale Molecular Assessments of Skin Photoaging through Virtual Inference of Spatial Transcriptomics from Routine Staining

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.30.551188

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7 citations

Matthew Davis, Matthew LeBoeuf, Michael Fatemi, Zarif Azher, Yunrui Lu +12 more

Spatial Omics Driven Crossmodal Pretraining Applied to Graph-based Deep Learning for Cancer Pathology Analysis

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.30.551187

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5 citations

Michael Fatemi, Yunrui Lu, Gokul Raghavendra Srinivasan, Alos Diallo, Brock C. Christensen +7 more

Feasibility of Inferring Spatial Transcriptomics from Single-Cell Histological Patterns for Studying Colon Cancer Tumor Heterogeneity

medRxiv(2023)10.1101/2023.10.09.23296701

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4 citations

Yunrui Lu, Cyril Sharma, Eric Feng, Zarif Azher, Alos Diallo +12 more

Hydroxymethylation alterations in progenitor-like cell types of pediatric central nervous system tumors are associated with cell type-specific transcriptional changes

Research Square(2023)10.21203/rs.3.rs-2517758/v1

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1 citations

Nasim Azizgolshani, Ze Zhang, Laurent Perreard, Fred Kolling, Lananh Nguyen +4 more

Peripheral blood epigenetic immune-profiling and survival outcomes with anti-programmed death (PD)-1 based therapy in recurrent/metastatic (R/M) squamous cell carcinoma of head and neck (SCCHN).

Journal of Clinical Oncology(2023)10.1200/jco.2023.41.16_suppl.6062

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1 citations

Ze Zhang, Keisuke Shirai, Rondi A. Butler, Min Kyung Lee, Annette M. Molinaro +7 more

An initial game-theoretic assessment of enhanced tissue preparation and imaging protocols for improved deep learning inference of spatial transcriptomics from tissue morphology

Briefings in Bioinformatics(2024)10.1093/bib/bbae476

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8 citations

Yunrui Lu, Alos Diallo, Gokul Raghavendra Srinivasan, Zarif Azher, Brock C. Christensen +8 more

Insights to aging prediction with AI based epigenetic clocks

Epigenomics(2024)10.1080/17501911.2024.2432854

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7 citations

Alos Diallo, Marietta K. Saldias Montivero, Sameer Gabbita, Lucas A. Salas, Brock C. Christensen +1 more

Matched Analysis of Detailed Peripheral Blood and Tumor Immune Microenvironment Profiles in Bladder Cancer

Epigenomics(2024)10.2217/epi-2023-0358

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5 citations

Lucas A. Salas, John K. Wiencke, Devin C. Koestler, Annette M. Molinaro, ANGELINE S. ANDREW +5 more

Glioma immune microenvironment composition calculator (GIMiCC): a method of estimating the proportions of eighteen cell types from DNA methylation microarray data

Acta Neuropathologica Communications(2024)10.1186/s40478-024-01874-0

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3 citations

John K. Wiencke, Ze Zhang, Annette M. Molinaro, Helen M. Hansen, Devin C. Koestler +4 more

Associations in cell type-specific hydroxymethylation and transcriptional alterations of pediatric central nervous system tumors

Nature Communications(2024)10.1038/s41467-024-47943-9

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2 citations

Nasim Azizgolshani, Ze Zhang, Laurent Perreard, Fred Kolling, Lananh Nguyen +4 more

Reply to: “Comments on the paper ‘Extensive epigenomic dysregulation is a hallmark of homologous recombination deficiency in triple‐negative breast cancer’ by Y. Chen et al.”

International Journal of Cancer(2025)10.1002/ijc.35434

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0 citations

Lucas A. Salas, Jonathan D. Marotti, Nicole P. Jenkins, Chao Cheng, Todd W. Miller +3 more

Retrotransposon methylation profiles and survival in Black women with high-grade serous ovarian carcinoma

Clinical Epigenetics(2025)10.1186/s13148-025-01942-9

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0 citations

Katherine A. Lawson-Michod, Courtney E. Johnson, Irma Vlasac, Sean Yoder, Tania Mesa +22 more

Normal gastric tissue Helicobacter pylori infection is associated with tissue cell composition, and cell type–specific epigenetic age acceleration, mitotic tick rate, and repetitive element methylation alterations

Epigenetics Reports(2025)10.1080/28361512.2025.2554836

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0 citations

Brock C. Christensen, Lucas A. Salas, Irma Vlasac

Supplementary Table S3 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

Figshare(2024)10.1158/1055-9965.26423557.v1

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Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

A cytokine-based serum proteomic score is a prognostic biomarker for immunotherapy in head and neck cancer

Cancer Immunology Immunotherapy(2025)10.1007/s00262-025-04271-1

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0 citations

Kartik Sehgal, Ze Zhang, Rondi A. Butler, John K. Wiencke, Annette M Molinaro +9 more

Supplemental Table 1 from Genomic Characterization of High-Grade Serous Ovarian Carcinoma Reveals Distinct Somatic Features in Black Individuals

Figshare(2025)10.1158/0008-5472.28917775

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Jeffrey R. Marks, Lindsay J. Collin, David A. Nix, Natalie R. Davidson, Chad D. Huff +9 more

Supplementary Figure S11 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

(2024)10.1158/1055-9965.26423611

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Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplementary Table S6 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

(2024)10.1158/1055-9965.26423548

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Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplementary Figure S6 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

Figshare(2024)10.1158/1055-9965.26423578.v1

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Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplementary Table S7 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

(2024)10.1158/1055-9965.26423545

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Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplementary Table S2 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

Figshare(2024)10.1158/1055-9965.26423560.v1

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Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplemental Table 5 from Genomic Characterization of High-Grade Serous Ovarian Carcinoma Reveals Distinct Somatic Features in Black Individuals

Figshare(2025)10.1158/0008-5472.28917763

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Jeffrey R. Marks, Lindsay J. Collin, David A. Nix, Natalie R. Davidson, Chad D. Huff +9 more

Supplemental Figure 2 from Genomic Characterization of High-Grade Serous Ovarian Carcinoma Reveals Distinct Somatic Features in Black Individuals

Figshare(2025)10.1158/0008-5472.28917793

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Jeffrey R. Marks, Lindsay J. Collin, David A. Nix, Natalie R. Davidson, Chad D. Huff +9 more

Supplementary Table S4 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

(2024)10.1158/1055-9965.26423554

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Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplementary Table S4 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

Figshare(2024)10.1158/1055-9965.26423554.v1

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Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Data from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

(2024)10.1158/1055-9965.c.7380196.v1

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Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplementary Figure S12 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

Figshare(2024)10.1158/1055-9965.26423608.v1

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Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplemental Figure 1 from Genomic Characterization of High-Grade Serous Ovarian Carcinoma Reveals Distinct Somatic Features in Black Individuals

(2025)10.1158/0008-5472.28917796

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Jeffrey R. Marks, Lindsay J. Collin, David A. Nix, Natalie R. Davidson, Chad D. Huff +9 more

Supplementary Figure S1 from Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms

(2024)10.1158/1055-9965.26423617

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Mollie E. Barnard, Ariel A. Hippen Anderson, Amy Campbell, Courtney E. Johnson, Gregory P. Way +9 more

Supplementary Table 1 from Homologous Recombination Deficiency and Survival in Ovarian High-Grade Serous Carcinoma by Self-Reported Race

Figshare(2025)10.1158/1055-9965.30517310

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Courtney E. Johnson, Mollie E. Barnard, Natalie R. Davidson, Lindsay J. Collin, David A. Nix +9 more

Lucas A. Salas

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