Benjamin A. García

Also affiliated with Washington University in St. Louis, McGill Genome Centre, McGill University, University of Pennsylvania

Biochemistry, Genetics and Molecular BiologyChemistry

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 7%percentile

0.104Author DataRank

Indexed papers

2in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Global analysis of excitotoxicity-induced alterations in RNA structure and RNA-protein binding in neurons

iScience(2025)10.1016/j.isci.2025.112595

Top 78%

0.104DataRank

Top 78%1 citations

Marianne C. Kramer, Cagla Akay, D. Paul Jackson, Julia A Tasca, Benjamin A. García +3 more

Papers

Driven by 108 papers — median percentile 22. Top paper: “Post-translational modifications of soluble α-synuclein regulate the amplification of pathological α-synuclein”.

Post-translational modifications of soluble α-synuclein regulate the amplification of pathological α-synuclein

Nature Neuroscience(2023)10.1038/s41593-022-01239-7

N/A

2.4DataRank · unranked

132 citations

Ruowei Zhu, Buyan Pan, Hong Xu, Modupe F. Olufemi, Ronald J. Gathagan +18 more

Loss of epigenetic information as a cause of mammalian aging

Cell(2023)10.1016/j.cell.2022.12.027

N/A

0.967DataRank · unranked

629 citations

Motoshi Hayano, Patrick Griffin, João A. Amorim, Michael S. Bonkowski, John K. Apostolides +59 more

SIRT1 is downregulated by autophagy in senescence and ageing

Nature Cell Biology(2020)10.1038/s41556-020-00579-5

N/A

0.923DataRank · unranked

468 citations

Lu Wang, Parinaz Fozouni, Gry Evjen, Vemika Chandra, Jing Jiang +13 more

Reproductive tract extracellular vesicles are sufficient to transmit intergenerational stress and program neurodevelopment

Nature Communications(2020)10.1038/s41467-020-15305-w

N/A

0.812DataRank · unranked

223 citations

Christopher P. Morgan, N. Adrian Leu, Amol C. Shetty, Yasmine M. Cissé, Bridget M. Nugent +13 more

Nucleome programming is required for the foundation of totipotency in mammalian germline development

The EMBO Journal(2022)10.15252/embj.2022110600

N/A

0.757DataRank · unranked

28 citations

Bo Hu, Shihori Yokobayashi, Akitoshi Yamamura, Fumiya Umemura, Mariel Coradin +25 more

Epigenetic and Transcriptional Control of the Epidermal Growth Factor Receptor Regulates the Tumor Immune Microenvironment in Pancreatic Cancer

Cancer Discovery(2020)10.1158/2159-8290.cd-20-0519

N/A

0.738DataRank · unranked

136 citations

Salina Yuan, Robert J. Norgard, Fangxue Yan, Yu Sun, Il‐Kyu Kim +9 more

Automethylation of PRC2 promotes H3K27 methylation and is impaired in H3K27M pediatric glioma

Genes & Development(2019)10.1101/gad.328773.119

N/A

0.723DataRank · unranked

123 citations

Jia-Ray Yu, Jeffrey Granat, Ricardo Saldaña-Meyer, Joshua Andrade, Gary LeRoy +7 more

Characterizing crosstalk in epigenetic signaling to understand disease physiology

Biochemical Journal(2023)10.1042/bcj20220550

N/A

0.694DataRank · unranked

26 citations

Benjamin A. García, Joanna K. Lempiäinen

Integrated multi-omics reveal polycomb repressive complex 2 restricts human trophoblast induction

Nature Cell Biology(2022)10.1038/s41556-022-00932-w

N/A

0.659DataRank · unranked

80 citations

Irene Talón, Sigrid Verhelst, Adam Bendall, Karlien Van Nerum, Alok Javali +32 more

Enzymatic transfer of acetate on histones from lysine reservoir sites to lysine activating sites

Science Advances(2022)10.1126/sciadv.abj5688

N/A

0.654DataRank · unranked

77 citations

Gabor Egervári, Simone Sidoli, Greg Donahue, Desi C. Alexander, Payel Sen +3 more

H3.3 G34W Promotes Growth and Impedes Differentiation of Osteoblast-Like Mesenchymal Progenitors in Giant Cell Tumor of Bone

Cancer Discovery(2020)10.1158/2159-8290.cd-20-0461

N/A

0.648DataRank · unranked

74 citations

Nicolas Jay, Shriya Deshmukh, Liam D. Hendrikse, Wajih Jawhar, Carol Chen +26 more

Structure and noncanonical Cdk8 activation mechanism within an Argonaute-containing Mediator kinase module

Science Advances(2021)10.1126/sciadv.abd4484

N/A

0.617DataRank · unranked

60 citations

Ti‐Chun Chao, Hee Jong Kim, Timothy Cholko, Shin-Fu Chen, Guojie Li +8 more

Histone butyrylation in the mouse intestine is mediated by the microbiota and associated with regulation of gene expression

Nature Metabolism(2024)10.1038/s42255-024-00992-2

N/A

0.601DataRank · unranked

54 citations

Bernardo Sgarbi Reis, Peder J. Lund, Matthew R. Paul, Marylène Leboeuf, Annaelle M. Djomo +10 more

Cryo-EM structure of TFIIH/Rad4–Rad23–Rad33 in damaged DNA opening in nucleotide excision repair

Nature Communications(2021)10.1038/s41467-021-23684-x

N/A

0.581DataRank · unranked

47 citations

Yoonjung Shim, Hee Jong Kim, Tingting Zhao, Shrabani Basu, Benjamin A. García +4 more

A Novel Brain PET Radiotracer for Imaging Alpha Synuclein Fibrils in Multiple System Atrophy

Journal of Medicinal Chemistry(2023)10.1021/acs.jmedchem.3c00779

N/A

0.553DataRank · unranked

39 citations

Wai Kit Chia, Chia‐Ju Hsieh, Dinahlee Saturnino Guarino, Thomas J. A. Graham, Zsofia Lengyel‐Zhand +16 more

TGF-β controls alveolar type 1 epithelial cell plasticity and alveolar matrisome gene transcription in mice

Journal of Clinical Investigation(2024)10.1172/jci172095

N/A

0.505DataRank · unranked

28 citations

Ian J. Penkala, Su Zhou, Jonathan J. Knowlton, Fabian L. Cardenas‐Diaz, Apoorva Babu +5 more

Cryo-EM structures of engineered active bc1-cbb3 type CIII2CIV super-complexes and electronic communication between the complexes

Nature Communications(2021)10.1038/s41467-021-21051-4

N/A

0.505DataRank · unranked

28 citations

Trevor van Eeuwen, Yavuz Öztürk, Hee Jong Kim, Merav Braitbard, Nur Selamoglu +5 more

Histone Modifications in Papillomavirus Virion Minichromosomes

mBio(2021)10.1128/mbio.03274-20

N/A

0.500DataRank · unranked

27 citations

Jennifer Liddle, Kristen Browne, Diana V. Pastrana, Benjamin A. García, Christopher B. Buck +3 more

Bullet points to evaluate the performance of the middle-down proteomics workflow for histone modification analysis

Methods(2020)10.1016/j.ymeth.2020.01.013

N/A

0.477DataRank · unranked

23 citations

Mariel Mendoza, Simone Sidoli, Andrew J. Alpert, Congcong Lu, Benjamin A. García +1 more

O-glycosylation contributes to mammalian glycoRNA biogenesis

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.08.28.610074

N/A

0.457DataRank · unranked

20 citations

Christopher Watkins, Chunsheng Jin, Xixuan Xie, Xiao Tan, Charlotta G. Lebedenko +8 more

An Optimized and High-Throughput Method for Histone Propionylation and Data-Independent Acquisition Analysis for the Identification and Quantification of Histone Post-translational Modifications

Journal of the American Society for Mass Spectrometry(2023)10.1021/jasms.3c00223

N/A

0.449DataRank · unranked

19 citations

Rashmi Karki, Zongtao Lin, F. Robison, Benjamin A. García, Richard Searfoss

Improved detection of DNA replication fork-associated proteins

Cell Reports(2024)10.1016/j.celrep.2024.114178

N/A

0.406DataRank · unranked

14 citations

Ya‐Chu Chang, Ryan L. Ragland, Yee Mon Thu, Muzaffer Ahmad Kassab, Rahul Shubhra Mandal +12 more

Alternative splicing of HDAC7 regulates its interaction with 14-3-3 proteins to alter histone marks and target gene expression

Cell Reports(2023)10.1016/j.celrep.2023.112273

N/A

0.396DataRank · unranked

13 citations

Michael J. Mallory, Max Ferretti, Davia Blake, Keegan S. Krick, Matthew R. Gazzara +3 more

Establishing a Top-Down Proteomics Platform on a Time-of-Flight Instrument with Electron-Activated Dissociation

Journal of Proteome Research(2025)10.1021/acs.jproteome.4c00874

N/A

0.396DataRank · unranked

13 citations

Emily Zahn, Zongtao Lin, Benjamin A. García, Richard Searfoss

Structure of the Hir histone chaperone complex

Molecular Cell(2024)10.1016/j.molcel.2024.05.031

N/A

0.385DataRank · unranked

12 citations

Mary R. Szurgot, Trevor van Eeuwen, M. Daniel Ricketts, Pratik Basnet, Athena L. Zhang +7 more

Stable Isotope Tracing In Vivo Reveals A Metabolic Bridge Linking The Microbiota To Host Histone Acetylation

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.05.450926

N/A

0.345DataRank · unranked

9 citations

Leah Gates, Marylène Leboeuf, Sarah A. Smith, Lillian Chau, Elliot S. Friedman +8 more

Chromatin profiling identifies putative dual roles for H3K27me3 in regulating transposons and cell type-specific genes in choanoflagellates

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.05.28.596151

N/A

0.269DataRank · unranked

5 citations

Lily W. Helfrich, Laura A. Wetzel, Natarajan V. Bhanu, Zuo‐Fei Yuan, Benjamin A. García +3 more

Comparative analysis of drug-like EP300/CREBBP acetyltransferase inhibitors

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.15.540887

N/A

0.208DataRank · unranked

3 citations

Deepika R. Tripu, Samuel A. Barritt, Yihang Jing, Diamond Gallimore, Stephen C. Kales +11 more

Glycoproteomics of Haloferax volcanii reveals an extensive glycoproteome and concurrence of different N -glycosylation pathways

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.21.427637

N/A

0.208DataRank · unranked

3 citations

Friedhelm Pfeiffer, Benjamin A. García, Mechthild Pohlschröder, Stefan Schulze

Altered chromatin occupancy of patient-associated H4 mutants misregulate neuronal differentiation

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.29.560141

N/A

0.165DataRank · unranked

2 citations

Douglas Barrows, Liangwen Zhong, Kärt Mätlik, Elizabeth G. Porter, Annaelle M. Djomo +8 more

Investigation of All Disease-Relevant Lysine Acetylation Sites in α-Synuclein Enabled by Non-canonical Amino Acid Mutagenesis

eLife(2025)10.7554/elife.109043

N/A

0.110DataRank · unranked

1 citations

Minghao Li, Grace Park, Jennifer Ramirez, Hudson Lee, P. R. Watson +10 more

Expanding the epitranscriptomic RNA sequencing and modification mapping mass spectrometry toolbox with field asymmetric waveform ion mobility and electrochemical elution liquid chromatography

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.28.514273

N/A

0.104DataRank · unranked

1 citations

Hee Jong Kim, Lindsay K. Pino, Alessandro Scacchetti, Roberto Bonasio, Benjamin A. García +1 more

Global analysis of excitotoxicity-induced alterations in RNA structure and RNA-protein binding in neurons

iScience(2025)10.1016/j.isci.2025.112595

Top 78%

0.104DataRank

Top 78%1 citations

Marianne C. Kramer, Cagla Akay, D. Paul Jackson, Julia A Tasca, Benjamin A. García +3 more

Discovery of N-(6-Methoxypyridin-3-yl)quinoline-2-amine Derivatives for Imaging Aggregated α-Synuclein in Parkinson’s Disease with Positron Emission Tomography

Cells(2025)10.3390/cells14141108

N/A

0.104DataRank · unranked

1 citations

Tianyu Huang, Dhruva D. Dhavale, Jennifer Y. O’Shea, Zsofia Lengyel‐Zhand, Dinahlee Saturnino Guarino +15 more

SUZ12–Nucleic Acid Interactions Constrain PRC2 Activity to Maintain Targeted Gene Silencing Essential to Diffuse Midline Glioma

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.07.18.665585

N/A

0.104DataRank · unranked

1 citations

Paul A. Clark, Audrey Baguette, Joanna K. Lempiäinen, Caterina Russo, Andrew Q. Rashoff +7 more

A dynamic and combinatorial histone code drives malaria parasite asexual and sexual development

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.19.452879

N/A

0.104DataRank · unranked

1 citations

Mariel Coradin, Mariel Mendoza, Janette Reader, Simone Sidoli, Benjamin A. García +2 more

Harnessing the Intrinsic Photochemistry of Isoxazoles for the Development of Chemoproteomic Crosslinking Methods

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.23.473999

N/A

0DataRank · unranked

0 citations

Vinayak Vishnu Pagar, Hee Jong Kim, Samantha X. Pancoe, Robert H. Mach, Benjamin A. García +2 more

SARS-CoV-2 disrupts host epigenetic regulation via histone mimicry

Nature(2022)10.1038/s41586-022-05282-z

N/A

0DataRank · unranked

152 citations

Samuel Thudium, David M. Renner, Karl M. Glastad, Katherine C. Palozola, Zhen Zhang +20 more

Stable isotope tracing in vivo reveals a metabolic bridge linking the microbiota to host histone acetylation

Cell Reports(2022)10.1016/j.celrep.2022.111809

N/A

0DataRank · unranked

57 citations

Leah Gates, Marylène Leboeuf, Sarah A. Smith, Lillian Chau, Mariana Lopes +9 more

Chromatin profiling in human neurons reveals aberrant roles for histone acetylation and BET family proteins in schizophrenia

Nature Communications(2022)10.1038/s41467-022-29922-0

N/A

0DataRank · unranked

37 citations

Shuangping Zheng, Nadine Schrode, Aaron Topol, Natarajan V. Bhanu, Ryan M. Bastle +12 more

Traumatic brain injury recapitulates developmental changes of axons

Progress in Neurobiology(2022)10.1016/j.pneurobio.2022.102332

N/A

0DataRank · unranked

23 citations

Chen Chen, Brian J. Kelley, Alexandra Tomasevich, Hyoungjoo Lee, Jean-Pierre Dollé +5 more

A Dynamic and Combinatorial Histone Code Drives Malaria Parasite Asexual and Sexual Development

Molecular & Cellular Proteomics(2022)10.1016/j.mcpro.2022.100199

N/A

0DataRank · unranked

22 citations

Mariel Coradin, Mariel Mendoza, Janette Reader, Simone Sidoli, Benjamin A. García +2 more

Combination of common mtDNA variants results in mitochondrial dysfunction and a connective tissue dysregulation

Proceedings of the National Academy of Sciences(2022)10.1073/pnas.2212417119

N/A

0DataRank · unranked

22 citations

Leonardo Scherer Alves, Maria Lvova, Jessica Huang, Komal S. Rathi, Kevin A. Janssen +11 more

Permethylation of ribonucleosides provides enhanced mass spectrometry quantification of post-transcriptional modifications

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.26.477959

N/A

0DataRank · unranked

1 citations

Kevin A. Janssen, Alessandro Scacchetti, Roberto Bonasio, Benjamin A. García, Yixuan Xie

Cleavage of histone H2A during embryonic stem cell differentiation destabilizes nucleosomes to counteract gene activation

Research Square(2022)10.21203/rs.3.rs-1397516/v1

N/A

0DataRank · unranked

0 citations

Mariel Coradin, Joseph Cesare, Yemin Lan, Zhexin Zhu, Peder J. Lund +6 more

Single substitution in H3.3G34 alters DNMT3A recruitment to cause progressive neurodegeneration

Cell(2023)10.1016/j.cell.2023.02.023

N/A

0DataRank · unranked

68 citations

Carol Chen, Augusto Faria Andrade, Nisha Kabir, Pariya Azarafshar, Shahir M. Morcos +40 more

Identification of a Putative α-synuclein Radioligand Using an in silico Similarity Search

Molecular Imaging and Biology(2023)10.1007/s11307-023-01814-9

N/A

0DataRank · unranked

17 citations

Guilong Tian, Zsofia Lengyel‐Zhand, Chia‐Ju Hsieh, Marshall G. Lougee, Aladdin Riad +13 more

Comparative Analysis of Drug-like EP300/CREBBP Acetyltransferase Inhibitors

ACS Chemical Biology(2023)10.1021/acschembio.3c00293

N/A

0DataRank · unranked

12 citations

Deepika R. Tripu, Samuel A. Barritt, Yihang Jing, Diamond Gallimore, Stephen C. Kales +11 more

Automation to Enable High-Throughput Chemical Proteomics

Journal of Proteome Research(2023)10.1021/acs.jproteome.3c00467

N/A

0DataRank · unranked

7 citations

Joanna Gongora, Xingyu Liu, Yixuan Xie, Chenfeng Zhao, Dongwen Lv +2 more

Expanding the Epitranscriptomic RNA Sequencing and Modification Mapping Mass Spectrometry Toolbox with Field Asymmetric Waveform Ion Mobility and Electrochemical Elution Liquid Chromatography

Analytical Chemistry(2023)10.1021/acs.analchem.2c04114

N/A

0DataRank · unranked

6 citations

Hee Jong Kim, Lindsay K. Pino, Alessandro Scacchetti, Yixuan Xie, F. Robison +4 more

Electrostatic encoding of genome organization principles within single native nucleosomes

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.08.570828

N/A

0DataRank · unranked

7 citations

Advait Athreya, Gustavo Carrizo, Nils A. Benning, Michelle M. Mitchener, Natarajan V. Bhanu +6 more

Systematic perturbations of SETD2, NSD1, NSD2, NSD3 and ASH1L reveals their distinct contributions to H3K36 methylation

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.27.559313

N/A

0DataRank · unranked

6 citations

Reinnier Padilla, Cynthia Horth, Bo Hu, Eric Bareke, Francisca N. de Luna Vitorino +5 more

TGFβ controls alveolar type 1 epithelial cell plasticity and alveolar matrisome gene transcription

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.09.540035

N/A

0DataRank · unranked

1 citations

Ian J. Penkala, Su Zhou, Fabian L. Cardenas‐Diaz, Apoorva Babu, Michael P. Morley +4 more

In utero pulse injection of isotopic amino acids quantifies protein turnover rates during murine fetal development

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.18.541242

N/A

0DataRank · unranked

0 citations

Barbara E. Coons, Zongtao Lin, John S. Riley, Mariel Mendoza, William H. Peranteau +2 more

Discovery of a Highly Potent and Selective HDAC8 Degrader: Advancing the Functional Understanding and Therapeutic Potential of HDAC8

Journal of Medicinal Chemistry(2024)10.1021/acs.jmedchem.4c00761

N/A

0DataRank · unranked

18 citations

Nikee Awasthee, Yi Liu, Chengcheng Meng, Michael Y. He, Seth Hale +8 more

Two DOT1 enzymes cooperatively mediate efficient ubiquitin-independent histone H3 lysine 76 tri-methylation in kinetoplastids

Nature Communications(2024)10.1038/s41467-024-46637-6

N/A

0DataRank · unranked

11 citations

Hideharu Hashimoto, Yixuan Xie, Francisca N. de Luna Vitorino, Josue Baeza, Tam T. T. N. Nguyen +5 more

Phosphorylation regulates viral biomolecular condensates to promote infectious progeny production

The EMBO Journal(2024)10.1038/s44318-023-00021-0

N/A

0DataRank · unranked

13 citations

Matthew Charman, Edwin Halko, Richard Lauman, Benjamin A. García, Matthew D. Weitzman +1 more

Optimized and Robust Workflow for Quantifying the Canonical Histone Ubiquitination Marks H2AK119ub and H2BK120ub by LC–MS/MS

Journal of Proteome Research(2024)10.1021/acs.jproteome.4c00519

N/A

0DataRank · unranked

6 citations

Peder J. Lund, Benjamin A. García, Mariana Lopes

In utero pulse injection of isotopic amino acids quantifies protein turnover rates during murine fetal development

Cell Reports Methods(2024)10.1016/j.crmeth.2024.100713

N/A

0DataRank · unranked

1 citations

Barbara E. Coons, Zongtao Lin, John S. Riley, Mariel Mendoza, William H. Peranteau +2 more

Early-life stress alters chromatin modifications in VTA to prime stress sensitivity

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.14.584631

N/A

0DataRank · unranked

12 citations

Julie‐Anne Balouek, Mason R. Barrett, Jeremy M. Thompson, Lisa Z. Fang, Lorna A. Farrelly +8 more

Defining the heterogeneous molecular landscape of lung cancer cell responses to epigenetic inhibition

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.05.23.592075

N/A

0DataRank · unranked

2 citations

Catherine M Sniezek, Christopher D. McGann, Rashmi Karki, Ross Giglio, Benjamin A. García +3 more

An optimized and robust workflow for quantifying the canonical histone ubiquitination marks H2AK119ub and H2BK120ub by LC-MS/MS

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.06.11.596744

N/A

0DataRank · unranked

1 citations

Peder J. Lund, Benjamin A. García, Mariana Lopes

Top-down Proteomics for the Characterization and Quantification of Calreticulin Arginylation

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.08.08.607245

N/A

0DataRank · unranked

0 citations

Xingyu Liu, Benjamin A. García, Zongtao Lin, Richard Searfoss

A circular engineered sortase for interrogating histone H3 in chromatin

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.10.612318

N/A

0DataRank · unranked

0 citations

Kwangwoon Lee, Zhipeng A. Wang, Emily Zahn, Congcong Lu, Maheeshi Yapa-Abeywardana +15 more

H1 histones control the epigenetic landscape by local chromatin compaction

Nature(2020)10.1038/s41586-020-3032-z

N/A

0DataRank · unranked

194 citations

Sean E. Healton, Cary N. Weiss, Boris Bartholdy, Yaïr Botbol, Laxmi Mishra +21 more

A needed nomenclature for nucleosomes

Molecular Cell(2025)10.1016/j.molcel.2025.08.029

N/A

0DataRank · unranked

12 citations

Geneviève Almouzni, Andrew J. Andrews, Karim-Jean Armache, C.H. Arrowsmith, Sung Hee Baek +33 more

Interactions of Neurodegenerative Disease Positron Emission Tomography Imaging Probe Candidates with the C‐Terminus of α‐Synuclein Fibrils

ChemBioChem(2025)10.1002/cbic.202500578

N/A

0DataRank · unranked

2 citations

Ryann M. Perez, Marshall G. Lougee, Vinayak Vishnu Pagar, Hee Jong Kim, Ho Young Kim +4 more

In vivo CRISPR screening reveals epigenetic regulators of hepatobiliary plasticity

Genes & Development(2025)10.1101/gad.352420.124

N/A

0DataRank · unranked

5 citations

H. Curé, Salina Yuan, Kenji Ito, Irfan A. Asangani, Benjamin A. García +3 more

dELTA-MS: A Mass Spectrometry-Based Proteomics Approach for Identifying ADP-Ribosylation Sites and Forms

Journal of Proteome Research(2025)10.1021/acs.jproteome.4c00890

N/A

0DataRank · unranked

0 citations

Emily Zahn, Richard Searfoss, Han-Byeol Kim, Morgan Dasovich, Jim Voorneveld +9 more

Pooled scanning of protein variants identifies novel RNA-binding mutants

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.02.646914

N/A

0DataRank · unranked

0 citations

J. Kenneth Doherty, Emily J. Shields, Shachinthaka D. Dissanayaka Mudiyanselage, Lauren Reich, Kavitha Sarma +3 more

YY1 relieves p300 autoinhibition to promote histone acetylation in advanced prostate cancer, enhancing the oncogenic signaling of Androgen Receptor Splice Variant 7

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.08.04.668477

N/A

0DataRank · unranked

0 citations

Dongyu Wu, Bo Pan, Xiaoxiao Ren, Samuel G. Mackintosh, Kanishk Jain +9 more

Investigation of All Disease-Relevant Lysine Acetylation Sites in α-Synuclein Enabled by Non-canonical Amino Acid Mutagenesis

eLife(2025)10.7554/elife.109043.1

N/A

0DataRank · unranked

0 citations

Minghao Li, Grace Park, Jennifer Ramirez, Hudson Lee, P. R. Watson +10 more

Neuropeptides specify and reprogram division of labor in the leafcutter ant Atta cephalotes

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.11.07.622473

N/A

0DataRank · unranked

0 citations

Karl M. Glastad, Maxxum Fioriti, Matan Sorek, Tierney Gannon, Daniel C. Xu +14 more

Histone H3.3 G34 mutations promote aberrant PRC2 activity and drive tumor progression

Proceedings of the National Academy of Sciences(2020)10.1073/pnas.2006076117

N/A

0DataRank · unranked

97 citations

Sima Khazaei, Dylan M. Marchione, Stefan Lundgren, Xiaoshi Wang, Daniel N. Weinberg +8 more

N6‐methyladenosine and RNA secondary structure affect transcript stability and protein abundance during systemic salt stress in Arabidopsis

Plant Direct(2020)10.1002/pld3.239

N/A

0DataRank · unranked

72 citations

Kevin A. Janssen, Kyle Palos, Andrew D. L. Nelson, Lee E. Vandivier, Benjamin A. García +4 more

Accelerating the Field of Epigenetic Histone Modification Through Mass Spectrometry–Based Approaches

Molecular & Cellular Proteomics(2020)10.1074/mcp.r120.002257

N/A

0DataRank · unranked

71 citations

Mariel Coradin, Elizabeth G. Porter, Benjamin A. García, Congcong Lu

Histone Acetyltransferase MOF Blocks Acquisition of Quiescence in Ground-State ESCs through Activating Fatty Acid Oxidation

Cell stem cell(2020)10.1016/j.stem.2020.06.005

N/A

0DataRank · unranked

63 citations

Yao-Chang Tsan, Fengbiao Mao, Daniel M. Kremer, Peter Sajjakulnukit, Li Zhang +12 more

Plasma proteomic profiling suggests an association between antigen driven clonal B cell expansion and ME/CFS

PLoS ONE(2020)10.1371/journal.pone.0236148

N/A

0DataRank · unranked

51 citations

Xiaoyu Che, Lucinda Bateman, Aaron M. Cheng, Benjamin A. García, Mady Hornig +10 more

Quantitative live cell imaging reveals influenza virus manipulation of Rab11A transport through reduced dynein association

Nature Communications(2020)10.1038/s41467-019-13838-3

N/A

0DataRank · unranked

48 citations

Valerie Le Sage, Eric Nturibi, Katarzyna Kulej, Jennifer E. Jones, Min Guo +6 more

Comparative differential cuproproteomes of Rhodobacter capsulatus reveal novel copper homeostasis related proteins

Metallomics(2020)10.1039/c9mt00314b

N/A

0DataRank · unranked

16 citations

Özlem Önder, Yavuz Öztürk, Bahia Khalfaoui-Hassani, Crysten E. Blaby‐Haas, Benjamin A. García +3 more

SIRT6 mono-ADP ribosylates KDM2A to locally increase H3K36me2 at DNA damage sites to inhibit transcription and promote repair

Aging(2020)10.18632/aging.103567

N/A

0DataRank · unranked

46 citations

David Yang, Seyed Ali Biashad, Denis Firsanov, Masaki Takasugi, Michael Gilbert +6 more

Disruption of ATRX-RNA interactions uncovers roles in ATRX localization and PRC2 function

Nature Communications(2020)10.1038/s41467-020-15902-9

N/A

0DataRank · unranked

38 citations

Nicole Medeiros, Robert Warneford-Thomson, Phillip Wulfridge, Qingqing Yan, Joyce Bian +7 more

A Workflow for Ultra-rapid Analysis of Histone Post-translational Modifications with Direct-injection Mass Spectrometry

BIO-PROTOCOL(2020)10.21769/bioprotoc.3756

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0DataRank · unranked

29 citations

Simone Sidoli, Benjamin A. García, Natarajan V. Bhanu

Histone Purification Combined with High‐Resolution Mass Spectrometry to Examine Histone Post‐Translational Modifications and Histone Variants in Caenorhabditis elegans

Current Protocols in Protein Science(2020)10.1002/cpps.114

N/A

0DataRank · unranked

6 citations

Zuo‐Fei Yuan, Marlies E. Oomen, Simone Brandenburg, Alexey Chernobrovkin, Jérôme Salignon +5 more

The PZP Domain of AF10 Senses Unmodified H3K27 to Regulate DOT1L-Mediated Methylation of H3K79

UNC Libraries(2020)10.17615/8dsb-2z68

N/A

0DataRank · unranked

4 citations

Aniruddha J. Deshpande, Or Gozani, Benjamin A. García, Scott A. Armstrong, Brian D. Strahl +6 more

PAX8 orchestrates an angiogenic program through interaction with SOX17

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.09.290387

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0DataRank · unranked

9 citations

Marilyn A. Mitchell, Cristina Arruza, Priyanka Rawat, Simone Sidoli, Robbin Nameki +11 more

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bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.05.078782

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0DataRank · unranked

7 citations

Shoudeng Chen, Uwe Schaefer, Leonia Bozzacco, Letícia A. M. Carneiro, Alan Gerber +16 more

Improved SILAC quantification with data independent acquisition to investigate bortezomib-induced protein degradation

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.23.394304

N/A

0DataRank · unranked

6 citations

Josue Baeza, Richard Lauman, Birgit Schilling, Benjamin A. García, Lindsay K. Pino

The Viral Polymerase Complex Mediates the Interaction of vRNPs with Recycling Endosomes During SeV Assembly

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.23.058883

N/A

0DataRank · unranked

0 citations

Katarzyna Kulej, Chuan-Tien Hung, Patricia A. Thibault, Kristopher D. Azarm, Toru Takimoto +6 more

Viral-mediated ubiquitination impacts interactions of host proteins with viral RNA and promotes viral RNA processing

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.05.136671

N/A

0DataRank · unranked

0 citations

Joseph M. Dybas, Jennifer Liddle, Alexander M. Price, Katharina E. Hayer, Richard Lauman +6 more

Quantitative Method for Assessing the Role of Lysine & Arginine Post-Translational Modifications in Nonalcoholic Steatohepatitis

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.01.17.910943

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0DataRank · unranked

0 citations

Aleksandra Binek, Vidya Venkatraman, Brian C. Searle, Ronald J. Holewinski, George Rosenberger +11 more

PROFILING OF Y1 CELLS TREATED WITH FGF-2 REVEALS PARALLELS WITH ONCOGENE-INDUCED SENESCENCE

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.17.247023

N/A

0DataRank · unranked

0 citations

Mariana Lopes, Simone Sidoli, Mariel Coradin, Francisca N. de Luna Vitorino, Júlia Pinheiro Chagas da Cunha +2 more

Cryo-EM Structures of Respiratory bc1-cbb3 type CIII2CIV Supercomplex and Electronic Communication Between the Complexes

Research Square(2020)10.21203/rs.3.rs-48203/v1

N/A

0DataRank · unranked

0 citations

Trevor van Eeuwen, Yavuz Öztürk, Hee Jong Kim, Merav Braitbard, Nur Selamoglu +5 more

Poly-acetylated chromatin signatures are preferred epitopes for site-specific histone H4 acetyl antibodies

UNC Libraries(2020)10.17615/yzya-ay28

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0DataRank · unranked

0 citations

Krzysztof Krajewski, Scott B. Rothbart, Brian D. Strahl, Lin Shu, Michael‐Christopher Keogh +2 more

A chemical probe selectively inhibits G9a and GLP methyltransferase activity in cells

UNC Libraries(2020)10.17615/h6h3-eh02

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0DataRank · unranked

0 citations

Peter A. DiMaggio, Dalia Barsyte-Lovejoy, Sylvie Rival‐Gervier, W. Tempel, Feng Liu +27 more

HDAC inhibition results in widespread alteration of the histone acetylation landscape and BRD4 targeting to gene bodies

Cell Reports(2021)10.1016/j.celrep.2020.108638

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0DataRank · unranked

117 citations

Erin K. Shanle, Abid Khan, Katrin F. Chua, Tao Hong, Lisa D. Boxer +7 more

Biochemical and functional characterization of mutant KRAS epitopes validates this oncoprotein for immunological targeting

Nature Communications(2021)10.1038/s41467-021-24562-2

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0DataRank · unranked

112 citations

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Improved SILAC Quantification with Data-Independent Acquisition to Investigate Bortezomib-Induced Protein Degradation

Journal of Proteome Research(2021)10.1021/acs.jproteome.0c00938

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0DataRank · unranked

70 citations

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Molecular Cell(2021)10.1016/j.molcel.2021.04.014

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0DataRank · unranked

41 citations

Congcong Lu, Hongbo M. Xie, Kevin Nestler, Marit W. Vermunt, Alexandra Lenard +8 more

Role of epigenetics in unicellular to multicellular transition in Dictyostelium

Genome biology(2021)10.1186/s13059-021-02360-9

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0DataRank · unranked

32 citations

Elizabeth A. Pollina, I‐Hao Wang, Lindsay K. Pino, Henry L. Bushnell, Ken Takashima +6 more

Structural insight on assembly-line catalysis in terpene biosynthesis

Nature Communications(2021)10.1038/s41467-021-23589-9

N/A

0DataRank · unranked

44 citations

Trevor van Eeuwen, Hee Jong Kim, Jose J. Gorbea Colón, Benjamin A. García, Kenji Murakami +2 more

Reprogramming of the epigenome in neurodevelopmental disorders

Critical Reviews in Biochemistry and Molecular Biology(2021)10.1080/10409238.2021.1979457

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0DataRank · unranked

27 citations

Elizabeth G. Porter, Benjamin A. García, Khadija Wilson

Interaction with the CCT chaperonin complex limits APOBEC3A cytidine deaminase cytotoxicity

EMBO Reports(2021)10.15252/embr.202052145

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0DataRank · unranked

12 citations

Rachel A. DeWeerd, David R O’Leary, Ava R. Hansen, Katharina E. Hayer, Katarzyna Kulej +5 more

An Esrrb and Nanog Cell Fate Regulatory Module Controlled by Feed Forward Loop Interactions

Frontiers in Cell and Developmental Biology(2021)10.3389/fcell.2021.630067

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0DataRank · unranked

13 citations

Dimitri Papatsenko, Amin R. Mazloom, Huilei Xu, Ana Vasileva, Richard D. Unwin +16 more

FGF-2 induces a failure of cell cycle progression in cells harboring amplified K-Ras, revealing new insights into oncogene-induced senescence

Molecular Omics(2021)10.1039/d1mo00019e

N/A

0DataRank · unranked

4 citations

Mariana Lopes, Simone Sidoli, Mariel Coradin, Francisca N. de Luna Vitorino, Júlia Pinheiro Chagas da Cunha +2 more

Longitudinal Large-Scale Semiquantitative Proteomic Data Stability Across Multiple Instrument Platforms

Journal of Proteome Research(2021)10.1021/acs.jproteome.1c00624

N/A

0DataRank · unranked

3 citations

Tina Glisovic‐Aplenc, Kathrin M. Bernt, Kevin Nestler, Joseph Cesare, Lusha Cao +11 more

Structure of TFIIH/Rad4-Rad23-Rad33 in damaged DNA opening in Nucleotide Excision Repair

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.14.426755

N/A

0DataRank · unranked

4 citations

Yoonjung Shim, Hee Jong Kim, Tingting Zhao, Shrabani Basu, Benjamin A. García +4 more

Structural visualization of de novo initiation of RNA polymerase II transcription

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.03.442346

N/A

0DataRank · unranked

2 citations

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