James Chen

Biochemistry, Genetics and Molecular BiologyEnvironmental ScienceMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 24 papers. Top paper: “Ensemble cryo-EM reveals conformational states of the nsp13 helicase in the SARS-CoV-2 helicase replication–transcription complex”.

Ensemble cryo-EM reveals conformational states of the nsp13 helicase in the SARS-CoV-2 helicase replication–transcription complex

Nature Structural & Molecular Biology(2022)10.1038/s41594-022-00734-6

N/A

0.670DataRank · unranked

86 citations

Qi Wang, Brandon Malone, Eliza Llewellyn, Yakov Pechersky, Kashyap Maruthi +6 more

The antibiotic sorangicin A inhibits promoter DNA unwinding in a Mycobacterium tuberculosis rifampicin-resistant RNA polymerase

Proceedings of the National Academy of Sciences(2020)10.1073/pnas.2013706117

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0DataRank · unranked

43 citations

James Chen, Hande Boyaci, Nathaniel R. Braffman, Elizabeth A. Hubin, Jennifer Herrmann +6 more

Native Mass Spectrometry-Based Screening for Optimal Sample Preparation in Single-Particle Cryo-EM

Structure(2020)10.1016/j.str.2020.11.001

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0DataRank · unranked

33 citations

Jin Young Kang, Eliza Llewellyn, Courtney Chiu, James Chen, Brandon Malone +5 more

Structural basis for helicase-polymerase coupling in the SARS-CoV-2 replication-transcription complex

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.08.194084

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0DataRank · unranked

47 citations

Brandon Malone, Eliza Llewellyn, Michael Grasso, Patrick M. M. Shelton, Paul Dominic B. Olinares +8 more

Time-resolved cryoEM using Spotiton

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.20.050518

N/A

0DataRank · unranked

6 citations

William C. Budell, Hui Wei, Daija Bobe, Kashyap Maruthi, Mykhailo Kopylov +14 more

Structural basis for transcription complex disruption by the Mfd translocase

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.12.248500

N/A

0DataRank · unranked

6 citations

Eliza Llewellyn, James Chen, Paul Dominic B. Olinares, Joshua J. Brewer, Brian T. Chait +3 more

Structural basis for backtracking by the SARS-CoV-2 replication–transcription complex

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2102516118

N/A

0DataRank · unranked

127 citations

James Chen, Qi Wang, Eliza Llewellyn, Young Joo Choi, Paul Dominic B. Olinares +9 more

Structural origins of Escherichia coli RNA polymerase open promoter complex stability

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2112877118

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0DataRank · unranked

42 citations

James Chen, Courtney Chiu, Brandon Malone, J Sotiris, Mark Ebrahim +4 more

Structural basis for backtracking by the SARS-CoV-2 replication-transcription complex

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.13.435256

N/A

0DataRank · unranked

27 citations

James Chen, Qi Wang, Eliza Llewellyn, Young Joo Choi, Paul Dominic B. Olinares +9 more

Ensemble cryo-electron microscopy reveals conformational states of the nsp13 helicase in the SARS-CoV-2 helicase replication-transcription complex

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.10.468168

N/A

0DataRank · unranked

11 citations

Qi Wang, Brandon Malone, Eliza Llewellyn, Yakov Pechersky, Kashyap Maruthi +6 more

Structural origins of Escherichia coli RNA polymerase open promoter complex stability

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.08.459427

N/A

0DataRank · unranked

0 citations

James Chen, Courtney Chiu, Brandon Malone, J Sotiris, Mark Ebrahim +4 more

Basis of narrow-spectrum activity of fidaxomicin on Clostridioides difficile

Nature(2022)10.1038/s41586-022-04545-z

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0DataRank · unranked

58 citations

Hande Boyaci, James Chen, Yu Bao, Robert Landick, Elizabeth A. Campbell +1 more

Structure of an endogenous mycobacterial MCE lipid transporter

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.08.519548

N/A

0DataRank · unranked

9 citations

Alice Fruhauf, Catherine Fan, Jackeline Ponce, Beatrix Ueberheide, Gira Bhabha +2 more

An ensemble of interconverting conformations of the elemental paused transcription complex creates regulatory options

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.11.507475

N/A

0DataRank · unranked

2 citations

Tatiana V. Mishanina, Yu Bao, James Chen, Eliza Llewellyn, James Liu +3 more

Structural basis for substrate selection by the SARS-CoV-2 replicase

Nature(2023)10.1038/s41586-022-05664-3

N/A

0DataRank · unranked

87 citations

Jason K. Perry, Paul Dominic B. Olinares, Hery W. Lee, James Chen, T.C. Appleby +14 more

Structure of an endogenous mycobacterial MCE lipid transporter

Nature(2023)10.1038/s41586-023-06366-0

N/A

0DataRank · unranked

58 citations

Alice Fruhauf, Catherine Fan, Jackeline Ponce, Beatrix Ueberheide, Gira Bhabha +2 more

An ensemble of interconverting conformations of the elemental paused transcription complex creates regulatory options

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2215945120

N/A

0DataRank · unranked

28 citations

Tatiana V. Mishanina, Yu Bao, James Chen, Eliza Llewellyn, James H. Liu +3 more

Protein target highlights in CASP15 : Analysis of models by structure providers

Proteins Structure Function and Bioinformatics(2023)10.1002/prot.26545

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0DataRank · unranked

35 citations

Janani Durairaj, Andriy Kryshtafovych, Luciano A. Abriata, Yusupha Bayo, Gira Bhabha +46 more

A general mechanism for transcription bubble nucleation in bacteria

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2220874120

N/A

0DataRank · unranked

10 citations

James Chen, Mengyu Wu, Courtney Chiu, B. Tracy Nixon, Elizabeth A. Campbell +2 more

Structure of an endogenous mycobacterial MCE lipid transporter

Research Square(2023)10.21203/rs.3.rs-2412186/v1

N/A

0DataRank · unranked

9 citations

Alice Fruhauf, Catherine Fan, Jackeline Ponce, Beatrix Ueberheide, Gira Bhabha +2 more

Early intermediates in bacterial RNA polymerase promoter melting visualized by time-resolved cryo-electron microscopy

Nature Structural & Molecular Biology(2024)10.1038/s41594-024-01349-9

N/A

0DataRank · unranked

12 citations

Mueller AU, Brandon Malone, James Chen, William C. Budell, Venkata P. Dandey +9 more

Identification of a depupylation regulator for an essential enzyme in Mycobacterium tuberculosis

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2407239121

N/A

0DataRank · unranked

5 citations

Jin Hee Yoo, James Chen, Kehilwe C. Nakedi, Lakshminarayan M. Iyer, Gregory Putzel +8 more

Time-resolved cryo-EM using Spotiton

Nature Methods(2020)10.1038/s41592-020-0925-6

N/A

0DataRank · unranked

153 citations

William C. Budell, Hui Wei, Daija Bobe, Kashyap Maruthi, Mykhailo Kopylov +14 more

Early intermediates in bacterial RNA polymerase promoter melting visualized by time-resolved cryo-electron microscopy

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.13.584744

N/A

0DataRank · unranked

3 citations

Mueller AU, Brandon Malone, James Chen, William C. Budell, Venkata P. Dandey +9 more