🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Bridget Shaner

St. Jude Children's Research Hospital

ORCID: 0000-0002-2312-2196

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 6 papers. Top paper: “A comparison of methods accounting for batch effects in differential expression analysis of UMI count based single cell RNA sequencing”.

A comparison of methods accounting for batch effects in differential expression analysis of UMI count based single cell RNA sequencing

Computational and Structural Biotechnology Journal(2020)10.1016/j.csbj.2020.03.026

N/A

0DataRank · unranked

49 citations

Silu Zhang, Justin Williams, Bensheng Ju, Bridget Shaner, John Easton +3 more

Accurate Genomic Variant Detection in Single Cells with Primary Template-Directed Amplification

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.20.391961

N/A

0DataRank · unranked

6 citations

Sivaraman Natarajan, Yuntao Xia, David Klein, Robert Carter, Yakun Pang +10 more

Accurate genomic variant detection in single cells with primary template-directed amplification

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2024176118

N/A

0DataRank · unranked

193 citations

Sivaraman Natarajan, Yuntao Xia, David Klein, Robert Carter, Yakun Pang +10 more

SequencErr: measuring and suppressing sequencer errors in next-generation sequencing data

Genome biology(2021)10.1186/s13059-020-02254-2

N/A

0DataRank · unranked

73 citations

Yu Sun, Yanling Liu, Pandurang Kolekar, Ying Shao, Karol Szlachta +14 more

Integrative network analysis reveals USP7 haploinsufficiency inhibits E-protein activity in pediatric T-lineage acute lymphoblastic leukemia (T-ALL)

Scientific Reports(2021)10.1038/s41598-021-84647-2

N/A

0DataRank · unranked

13 citations

Li Dong, Liqing Tian, Chenxi Qian, Yu Liu, Bensheng Ju +19 more

Single-cell analysis reveals the Comma-1D cell line as a unique model for mammary gland development and breast cancer

Journal of Cell Science(2022)10.1242/jcs.259329

N/A

0DataRank · unranked

4 citations

Erin A. Nekritz, Koon‐Kiu Yan, Bensheng Ju, Bridget Shaner, John Easton +3 more