Subhajyoti De

Rutgers, The State University of New Jersey

Also affiliated with Rutgers Cancer Institute

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 26 papers. Top paper: “Understanding the role of phenotypic switching in cancer drug resistance”.

Understanding the role of phenotypic switching in cancer drug resistance

Journal of Theoretical Biology(2020)10.1016/j.jtbi.2020.110162

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0DataRank · unranked

79 citations

Subhajyoti De, Kevin Leder, Jasmine Foo, Einar Bjarki Gunnarsson

Identification of regulators of poly-ADP-ribose polymerase inhibitor response through complementary CRISPR knockout and activation screens

Nature Communications(2020)10.1038/s41467-020-19961-w

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0DataRank · unranked

54 citations

Emily M. Schleicher, Tanay Thakar, Anastasia Hale, Ashna Dhoonmoon, Nathanial J. Tolman +8 more

Characteristics of mutational signatures of unknown etiology

NAR Cancer(2020)10.1093/narcan/zcaa026

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0DataRank · unranked

19 citations

Zhuxuan Xu, Subhajyoti De, Xiaoju Hu

Requirement of Bccip for the Regeneration of Intestinal Progenitors

American Journal Of Pathology(2020)10.1016/j.ajpath.2020.09.009

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0DataRank · unranked

3 citations

Caiyong Ye, Jingmei Liu, Arnold B. Rabson, Michael P. Verzi, Subhajyoti De +2 more

Common variants near MC4R are associated with fat mass, weight and risk of obesity

UNC Libraries(2020)10.17615/wg5p-js22

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0DataRank · unranked

0 citations

Murielle Bochud, Subhajyoti De, Christian Dina, Rachel M. Freathy, George Davey Smith +27 more

Mutational signatures associated with exposure to carcinogenic microplastic compounds bisphenol A and styrene oxide

NAR Cancer(2021)10.1093/narcan/zcab004

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0DataRank · unranked

44 citations

Antara Biswas, Anchal Sharma, Halle Sarkodie, Ivy Tran, Indrani Pal +2 more

Signatures Beyond Oncogenic Mutations in Cell-Free DNA Sequencing for Non-Invasive, Early Detection of Cancer

Frontiers in Genetics(2021)10.3389/fgene.2021.759832

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0DataRank · unranked

4 citations

Subhajyoti De

Tumor-microbiome links subtype, cellular programs, and immunity in pancreatic cancer

Research Square(2021)10.21203/rs.3.rs-929279/v1

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0DataRank · unranked

0 citations

Bassel Ghaddar, Antara Biswas, Chris Harris, M. Bishr Omary, Darren R. Carpizo +2 more

Tumor microbiome links cellular programs and immunity in pancreatic cancer

Cancer Cell(2022)10.1016/j.ccell.2022.09.009

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0DataRank · unranked

175 citations

Antara Biswas, Chris Harris, M. Bishr Omary, Darren R. Carpizo, Martin J. Blaser +2 more

Reconstructing physical cell interaction networks from single-cell data using Neighbor-seq

Nucleic Acids Research(2022)10.1093/nar/gkac333

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0DataRank · unranked

20 citations

Subhajyoti De, Bassel Ghaddar

Reconstructing physical cell interaction networks from single-cell data using Neighbor-seq

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.15.488517

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0DataRank · unranked

3 citations

Subhajyoti De, Bassel Ghaddar

Census: accurate, automated, deep, fast, and hierarchical scRNA-seq cell-type annotation

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.19.512926

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0DataRank · unranked

3 citations

Subhajyoti De, Bassel Ghaddar

The Radiogenomic and Spatiogenomic Landscapes of Glioblastoma, and their Relationship to Oncogenic Drivers

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.15.517767

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0DataRank · unranked

3 citations

Hamed Akbari, Xiaoju Hu, Vikas Bommineni, Dimitris Grigoriadis, Erik Toorens +19 more

Denoising sparse microbial signals from single-cell sequencing of mammalian host tissues

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.29.498176

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0DataRank · unranked

1 citations

Martin J. Blaser, Subhajyoti De, Bassel Ghaddar

Denoising sparse microbial signals from single-cell sequencing of mammalian host tissues

Nature Computational Science(2023)10.1038/s43588-023-00507-1

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0DataRank · unranked

25 citations

Martin J. Blaser, Subhajyoti De, Bassel Ghaddar

Integrated metabolic and genetic analysis reveals distinct features of human differentiated thyroid cancer

Clinical and Translational Medicine(2023)10.1002/ctm2.1298

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0DataRank · unranked

21 citations

Akshada Sawant, Dirk F. Moore, Hua Zhu Ke, Fuqian Shi, Saurabh V. Laddha +18 more

Hierarchical and automated cell-type annotation and inference of cancer cell of origin with Census

Bioinformatics(2023)10.1093/bioinformatics/btad714

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0DataRank · unranked

6 citations

Subhajyoti De, Bassel Ghaddar

Cell-free nucleic acid fragmentomics: A non-invasive window into cellular epigenomes

Translational Oncology(2024)10.1016/j.tranon.2024.102085

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0DataRank · unranked

12 citations

Debajyoti Kabiraj, Subhajyoti De, Ahmad Salman Sirajee

Mismatch repair protein MLH1 suppresses replicative stress in BRCA2-deficient breast tumors

Journal of Clinical Investigation(2024)10.1172/jci173718

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0DataRank · unranked

11 citations

Xiaoju Hu, Vaishnavi Peddibhotla, Kuppusamy Balamurugan, Alexander Y. Mitrophanov, Lois McKennett +12 more

Oncointerpreter.ai enables interactive, personalized summarization of cancer diagnostics data

Journal of the American Medical Informatics Association(2024)10.1093/jamia/ocae284

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0DataRank · unranked

4 citations

Brett L. Ecker, Patrick M. Boland, Saum Ghodoussipour, Gregory R Riedlinger, Subhajyoti De +1 more

Medulloblastomas Initiated by Homologous Recombination Defects in Mice

American Journal Of Pathology(2024)10.1016/j.ajpath.2024.07.018

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0DataRank · unranked

1 citations

Yuan Wang, Shipra Chaudhary, Varshita Balaga, Hua Zhu Ke, Fuqian Shi +8 more

Lipogenic enzyme FASN promotes mutant p53 accumulation and gain-of-function through palmitoylation

Nature Communications(2025)10.1038/s41467-025-57099-9

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0DataRank · unranked

19 citations

Yiyun Shen, Jie Liu, Dandan Xu, Chun‐Yuan Chang, Jianming Wang +8 more

The new microbiome on the block: challenges and opportunities of using human tumor sequencing data to study microbes

Nature Methods(2025)10.1038/s41592-025-02807-y

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0DataRank · unranked

15 citations

Anjun Ma, Evan Johnson, Charis Eng, Subhajyoti De, Sizun Jiang +4 more

Revisiting the cancer microbiome using PRISM

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.01.21.634087

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0DataRank · unranked

4 citations

Martin J. Blaser, Subhajyoti De, Bassel Ghaddar

Modeling non-genetic adaptation in tumor cells

Cell Systems(2025)10.1016/j.cels.2024.12.007

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0DataRank · unranked

0 citations

Subhajyoti De, Edmund C. Lattime

Complex HPV-human DNA structures revealed by large-scale DNA analyses in an HPV-cancer derived cell line

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.06.680684

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0DataRank · unranked

0 citations

Yoke-Chen Chang, Vandya Rao, Jessie Hollingsworth, Michelle Brown, Debajyoti Kabiraj +11 more