🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Daphne Koller

Department of Computer Science, Stanford University, Stanford, CA 94305;

ORCID: 0000-0002-2361-6479
Computer ScienceBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
6.0Author DataRank

Indexed papers

1in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

The Genotype-Tissue Expression (GTEx) project

Nature Genetics(2013)10.1038/ng.2653
Top 3%
6.0DataRank
Top 3%10097 citations

Mike Salvatore, Rebecca Phillips, Bernadette Mestichelli, Saboor Shad, Richard Hasz +144 more

Papers

Driven by 13 papers — median percentile 97. Top paper: “Correction: Corrigendum: Synchronized age-related gene expression changes across multiple tissues in human and the link to complex diseases”.

Correction: Corrigendum: Synchronized age-related gene expression changes across multiple tissues in human and the link to complex diseases

Scientific Reports(2016)10.1038/srep19384
N/A
10.4DataRank · unranked
722 citations

Tao Huang, Francesca Petralia, Quan Long, Bin Zhang, Carmen Argmann +129 more

The Genotype-Tissue Expression (GTEx) project

Nature Genetics(2013)10.1038/ng.2653
Top 3%
6.0DataRank
Top 3%10097 citations

Mike Salvatore, Rebecca Phillips, Bernadette Mestichelli, Saboor Shad, Richard Hasz +144 more

Transcriptomes of the B and T Lineages Compared by Multiplatform Microarray Profiling

The Journal of Immunology(2011)10.4049/jimmunol.1002695
N/A
4.5DataRank · unranked
106 citations

Scott Davis, Diane Mathis, the Immunological Genome Project Consortium, Yan Zhou, Natasha Asinovski +48 more

Variation and Genetic Control of Gene Expression in Primary Immunocytes across Inbred Mouse Strains

The Journal of Immunology(2014)10.4049/jimmunol.1401280
N/A
1.9DataRank · unranked
47 citations

Adriana Ortiz-Lopez, Molly A. Bogue, Kimie Hattori, Cristina Pop, Daphne Koller +54 more

Module networks: identifying regulatory modules and their condition-specific regulators from gene expression data

Nature Genetics(2003)10.1038/ng1165
N/A
1.1DataRank · unranked
1701 citations

Michael Shapira, Prisca Liberali, David Botstein, Daphne Koller, Nir Friedman +3 more

A module map showing conditional activity of expression modules in cancer

Nature Genetics(2004)10.1038/ng1434
N/A
0.983DataRank · unranked
700 citations

Nir Friedman, Daphne Koller, Prisca Liberali, Eran Segal

Polarization of the Effects of Autoimmune and Neurodegenerative Risk Alleles in Leukocytes

Science(2014)10.1126/science.1249547
N/A
0.948DataRank · unranked
556 citations

Sara Mostafavi, Chun Jimmie Ye, Mark N. Lee, Joseph M. Replogle, Ting Feng +22 more

Conservation and divergence in the transcriptional programs of the human and mouse immune systems

Proceedings of the National Academy of Sciences(2013)10.1073/pnas.1222738110
N/A
0.886DataRank · unranked
366 citations

the Immunological Genome Project Consortium, Or Zuk, Katherine Rothamel, David Puyraimond-Zemmour, Ting Feng +7 more

Effect of predicted protein-truncating genetic variants on the human transcriptome

Science(2015)10.1126/science.1261877
N/A
0.877DataRank · unranked
345 citations

Matti Pirinen, Donald F. Conrad, Monkol Lek, Emily K. Tsang, Konrad J. Karczewski +206 more

Synchronized age-related gene expression changes across multiple tissues in human and the link to complex diseases

Scientific Reports(2015)10.1038/srep15145
N/A
0.811DataRank · unranked
222 citations

Tao Huang, Francesca Petralia, Quan Long, Bin Zhang, Carmen Argmann +128 more

Identification of transcriptional regulators in the mouse immune system

Nature Immunology(2013)10.1038/ni.2587
N/A
0.796DataRank · unranked
201 citations

Tal Shay, Kavitha Narayan, Or Zuk, Xin Sun, Joonsoo Kang +3 more

TDP-43 loss induces cryptic polyadenylation in ALS/FTD

Nature Neuroscience(2025)10.1038/s41593-025-02050-w
N/A
0.593DataRank · unranked
23 citations

Anna‐Leigh Brown, Max Z. Y. J. Chien, Dario Dattilo, Puja R. Mehta, Francesca Mattedi +94 more

Conservation and divergence in modules of the transcriptional programs of the human and mouse immune systems

bioRxiv (Cold Spring Harbor Laboratory)(2018)10.1101/286211
N/A
0.104DataRank · unranked
1 citations

the Immunological Genome Project Consortium, Or Zuk, Daphne Koller, Prisca Liberali, ImmGen consortium +2 more