Nicholson Collier

Also affiliated with University of Chicago, Molecular Biology Consortium

MedicineImmunology and Microbiology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Emulator-based Bayesian calibration of the CISNET colorectal cancer models

medRxiv(2023)10.1101/2023.02.27.23286525

Top 100%

0DataRank

Top 100%0 citations

Claudia L. Seguin, Luuk A van Duuren, Amy B. Knudsen, Barak Davidi, Pedro Nascimento de Lima +7 more

Papers

Driven by 31 papers — median percentile 0. Top paper: “Model Exploration of an Information-Based Healthcare Intervention Using Parallelization and Active Learning”.

Model Exploration of an Information-Based Healthcare Intervention Using Parallelization and Active Learning

Journal of Artificial Societies and Social Simulation(2020)10.18564/jasss.4379

N/A

0DataRank · unranked

10 citations

Jonathan Ozik, Nicholson Collier, Charles M. Macal, Kelly Boyd, Jennifer A. Makelarski +3 more

Iterative community-driven development of a SARS-CoV-2 tissue simulator

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.02.019075

N/A

0DataRank · unranked

71 citations

Yafei Wang, Gary An, Maansi Asthana, Andrew Becker, Chase Cockrell +30 more

Building and experimenting with an agent-based model to study the population-level impact of CommunityRx, a clinic-based community resource referral intervention

PLoS Computational Biology(2021)10.1371/journal.pcbi.1009471

N/A

0DataRank · unranked

11 citations

Jennifer A. Makelarski, Chaitanya Kaligotla, Emily Abramsohn, David G. Beiser, Chiahung Chou +6 more

Projecting the number of new HIV infections to formulate the "Getting to Zero" strategy in Illinois, USA

Mathematical Biosciences & Engineering(2021)10.3934/mbe.2021196

N/A

0DataRank · unranked

10 citations

Mert Edali, Jonathan Ozik, Nicholson Collier, Anna Hotton, Abigail Skwara +6 more

Modeling hepatitis C micro-elimination among people who inject drugs with direct-acting antivirals in metropolitan Chicago

PLoS ONE(2022)10.1371/journal.pone.0264983

N/A

0DataRank · unranked

19 citations

Alexander Gutfraind, Nicholson Collier, Desarae Echevarria, Scott J. Cotler, Marian Major +4 more

Sequentially calibrating a Bayesian microsimulation model to incorporate new information and assumptions

BMC Medical Informatics and Decision Making(2022)10.1186/s12911-021-01726-0

N/A

0DataRank · unranked

15 citations

Carolyn M. Rutter, Jonathan Ozik, Nicholson Collier, Maria DeYoreo

Expanding Medicaid to Reduce Human Immunodeficiency Virus Transmission in Houston, Texas

Medical Care(2022)10.1097/mlr.0000000000001772

N/A

0DataRank · unranked

8 citations

Aditya Khanna, Camden J. Hallmark, Richa Lavingia, Marlene McNeese, Jing Zhao +10 more

An Evolutionary Algorithm to Personalize Stool-Based Colorectal Cancer Screening

Frontiers in Physiology(2022)10.3389/fphys.2021.718276

N/A

0DataRank · unranked

4 citations

Jonathan Ozik, Remy Spliet, Nicholson Collier, Iris Lansdorp‐Vogelaar, Reinier G.S. Meester +1 more

Unequal Recovery in Colorectal Cancer Screening Following the COVID-19 Pandemic: A Comparative Microsimulation Analysis

medRxiv(2022)10.1101/2022.12.23.22283887

N/A

0DataRank · unranked

8 citations

Rosita van den Puttelaar, Anne I. Hahn, Matthias Harlass, Nicholson Collier, Jonathan Ozik +4 more

Projected long-term effects of colorectal cancer screening disruptions following the COVID-19 pandemic

eLife(2023)10.7554/elife.85264

N/A

0DataRank · unranked

21 citations

Rosita van den Puttelaar, Anne I. Hahn, Matthias Harlass, Nicholson Collier, Jonathan Ozik +4 more

NordICC Trial Results in Line With Expected Colorectal Cancer Mortality Reduction After Colonoscopy: A Modeling Study

Gastroenterology(2023)10.1053/j.gastro.2023.06.035

N/A

0DataRank · unranked

12 citations

Pedro Nascimento de Lima, Amy B. Knudsen, Carolyn M. Rutter, David S. Weinberg, Iris Lansdorp‐Vogelaar +18 more

Impact of post-incarceration care engagement interventions on HIV transmission among young Black men who have sex with men and their sexual partners: an agent-based network modeling study

The Lancet Regional Health - Americas(2023)10.1016/j.lana.2023.100628

N/A

0DataRank · unranked

6 citations

Francis Lee, Daniel Sheeler, Jonathan Ozik, Nicholson Collier, Mert Edali +8 more

Developing Distributed High-performance Computing Capabilities of an Open Science Platform for Robust Epidemic Analysis

PubMed(2023)10.1109/ipdpsw59300.2023.00143

N/A

0DataRank · unranked

12 citations

Justin M. Wozniak, Abby Stevens, Yadu Babuji, Mickaël Binois, Arindam Fadikar +4 more

PSI/J: A Portable Interface for Submitting, Monitoring, and Managing Jobs

PubMed(2023)10.1109/e-science58273.2023.10254912

N/A

0DataRank · unranked

12 citations

André Merzky, Nicholson Collier, Ketan Maheshwari, Jonathan Ozik, Matteo Turilli +8 more

Trajectory-Oriented Optimization of Stochastic Epidemiological Models

PubMed(2023)10.1109/wsc60868.2023.10408258

N/A

0DataRank · unranked

10 citations

Nicholson Collier, Abby Stevens, Jonathan Ozik, Mickaël Binois, Kok Ben Toh +1 more

Spatial inequities in access to medications for treatment of opioid use disorder highlight scarcity of methadone providers under counterfactual scenarios

medRxiv(2023)10.1101/2023.05.12.23289915

N/A

0DataRank · unranked

2 citations

Qinyun Lin, Jonathan Ozik, Marynia Kolak, Nicholson Collier, Dylan Halpern +5 more

Emulator-based Bayesian calibration of the CISNET colorectal cancer models

medRxiv(2023)10.1101/2023.02.27.23286525

Top 100%

0DataRank

Top 100%0 citations

Claudia L. Seguin, Luuk A van Duuren, Amy B. Knudsen, Barak Davidi, Pedro Nascimento de Lima +7 more

Developing Distributed High-performance Computing Capabilities of an Open Science Platform for Robust Epidemic Analysis

arXiv (Cornell University)(2023)10.48550/arxiv.2304.14244

N/A

0DataRank · unranked

0 citations

Justin M. Wozniak, Abby Stevens, Yadu Babuji, Mickaël Binois, Arindam Fadikar +4 more

Trajectory-oriented optimization of stochastic epidemiological models

arXiv (Cornell University)(2023)10.48550/arxiv.2305.03926

N/A

0DataRank · unranked

0 citations

Mickaël Binois, Nicholson Collier, Abby Stevens, Kok Ben Toh, Jonathan Ozik +1 more

PSI/J: A Portable Interface for Submitting, Monitoring, and Managing Jobs

arXiv (Cornell University)(2023)10.48550/arxiv.2307.07895

N/A

0DataRank · unranked

0 citations

André Merzky, Nicholson Collier, Ketan Maheshwari, Jonathan Ozik, Matteo Turilli +8 more

Characteristics of a cost-effective blood test for colorectal cancer screening

JNCI Journal of the National Cancer Institute(2024)10.1093/jnci/djae124

N/A

0DataRank · unranked

26 citations

Rosita van den Puttelaar, Amy B. Knudsen, Anne I. Hahn, Karen M. Kuntz, Jonathan Ozik +7 more

Emulator-Based Bayesian Calibration of the CISNET Colorectal Cancer Models

Medical Decision Making(2024)10.1177/0272989x241255618

N/A

0DataRank · unranked

9 citations

Claudia L. Seguin, Luuk A. van Duuren, Amy B. Knudsen, Barak Davidi, Pedro Nascimento de Lima +7 more

Optimal Stopping Ages for Colorectal Cancer Screening

JAMA Network Open(2024)10.1001/jamanetworkopen.2024.51715

N/A

0DataRank · unranked

4 citations

Ronit R. Dalmat, Jessica Chubak, Rosita van den Puttelaar, Natalia Udaltsova, Douglas A. Corley +6 more

Modeling of randomized hepatitis C vaccine trials: Bridging the gap between controlled human infection models and real-word testing

PNAS Nexus(2024)10.1093/pnasnexus/pgae564

N/A

0DataRank · unranked

3 citations

Alexander Gutfraind, Eric Tatara, Nicholson Collier, Scott J. Cotler, Kimberly Page +5 more

Spatial inequities in access to medications for treatment of opioid use disorder highlight scarcity of methadone providers under counterfactual scenarios

PLoS Computational Biology(2024)10.1371/journal.pcbi.1012307

N/A

0DataRank · unranked

2 citations

Qinyun Lin, Jonathan Ozik, Marynia Kolak, Nicholson Collier, Dylan Halpern +5 more

Theoretical modeling of hepatitis C acute infection in liver-humanized mice support pre-clinical assessment of candidate viruses for controlled-human-infection studies

Scientific Reports(2024)10.1038/s41598-024-83104-0

N/A

0DataRank · unranked

1 citations

Adquate Mhlanga, Yuji Ishida, Ari Josephson, Nicholson Collier, Hiromi Abe‐Chayama +8 more

Distributed Model Exploration with EMEWS

PubMed(2024)10.1109/wsc63780.2024.10838848

N/A

0DataRank · unranked

4 citations

Justin M. Wozniak, Arindam Fadikar, Abby Stevens, Jonathan Ozik, Nicholson Collier

Response to Hu, Yang, and Sun

JNCI Journal of the National Cancer Institute(2024)10.1093/jnci/djae341

N/A

0DataRank · unranked

0 citations

Carolyn M. Rutter, Rosita van den Puttelaar, Anne I. Hahn, Jonathan Ozik, Nicholson Collier +4 more

Benefits of colorectal cancer screening using fecal immunochemical testing with varying positivity thresholds by age and sex

JNCI Journal of the National Cancer Institute(2025)10.1093/jnci/djaf149

N/A

0DataRank · unranked

3 citations

Amy B. Knudsen, Daan Nieboer, Luuk A van Duuren, Karen M. Kuntz, Carolyn M. Rutter +10 more

Modeling of hepatitis B virus infection spread in primary human hepatocytes

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.02.05.636596

N/A

0DataRank · unranked

1 citations

Masataka Tsuge, Nicholson Collier, Yasue Takeuchi, Takuro Uchida, Carolyn M. Rutter +8 more

A Portfolio Approach to Massively Parallel Bayesian Optimization

Journal of Artificial Intelligence Research(2025)10.1613/jair.1.16868

N/A

0DataRank · unranked

0 citations

Nicholson Collier, Jonathan Ozik, Mickaël Binois

Nicholson Collier

Indexed papers

Top data-sharing exemplar

Papers