🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Harshad Hegde

Lawrence Berkeley National Laboratory

ORCID: 0000-0002-2411-565X
Biochemistry, Genetics and Molecular BiologyComputer Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
9.1Author DataRank

Indexed papers

5in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 5 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

The Human Phenotype Ontology in 2024: phenotypes around the world

Nucleic Acids Research(2023)10.1093/nar/gkad1005
Top 6%
3.9DataRank
Top 6%387 citations

Nicolas A Matentzoglu, Ben D Coleman, Eunice B Addo-Lartey, Anna V. Anagnostopoulos, Joel Anderton +95 more

Papers

Driven by 17 papers — median percentile 86. Top paper: “The Human Phenotype Ontology in 2024: phenotypes around the world”.

The Human Phenotype Ontology in 2024: phenotypes around the world

Nucleic Acids Research(2023)10.1093/nar/gkad1005
Top 6%
3.9DataRank
Top 6%387 citations

Nicolas A Matentzoglu, Ben D Coleman, Eunice B Addo-Lartey, Anna V. Anagnostopoulos, Joel Anderton +95 more

Mondo: Unifying diseases for the world, by the world

medRxiv(2022)10.1101/2022.04.13.22273750
Top 8%
2.7DataRank
Top 8%104 citations

Nicolas A Matentzoglu, Sabrina Toro, Joseph E Flack, Harshad Hegde, Deepak R Unni +83 more

The Monarch Initiative in 2024: an analytic platform integrating phenotypes, genes and diseases across species

Nucleic Acids Research(2023)10.1093/nar/gkad1082
Top 14%
1.5DataRank
Top 14%106 citations

Kevin Schaper, Nicolas A Matentzoglu, Vincent Rubinetti, Faisal Alquaddoomi, Corey Cox +39 more

Phenopacket-tools: Building and validating GA4GH Phenopackets

PLoS ONE(2023)10.1371/journal.pone.0285433
Top 36%
0.534DataRank
Top 36%12 citations

Julius O.B. Jacobsen, Alex H. Wagner, Tudor Groza, Martha A. Beckwith, Lauren Rekerle +13 more

BioPortal: an open community resource for sharing, searching, and utilizing biomedical ontologies

Nucleic Acids Research(2025)10.1093/nar/gkaf402
Top 40%
0.483DataRank
Top 40%14 citations

Nomi L. Harris, Michael V Dorf, Alex Skrenchuk, J. Harry Caufield, Rafael S. Gonçalves +6 more

A change language for ontologies and knowledge graphs

Database(2025)10.1093/database/baae133
N/A
0.330DataRank · unranked
8 citations

Jennifer Vendetti, Damien Goutte-Gattat, J. Harry Caufield, Graybeal, John, Nomi L. Harris +7 more

Identifying oral disease variables associated with pneumonia emergence by application of machine learning to integrated medical and dental big data to inform eHealth approaches

Frontiers in Dental Medicine(2022)10.3389/fdmed.2022.1005140
N/A
0.165DataRank · unranked
2 citations

Ingrid Glurich, Aloksagar Panny, Harshad Hegde, Frank A. Scannapieco, Amit Acharya +1 more

A Simple Standard for Sharing Ontological Mappings (SSSOM)

Database(2022)10.1093/database/baac035
N/A
0.104DataRank · unranked
1 citations

James P. Balhoff, Susan M. Bello, Chris Bizon, Matthew Brush, Tiffany J. Callahan +39 more

KG-Hub -- Building and Exchanging Biological Knowledge Graphs

arXiv (Cornell University)(2023)10.48550/arxiv.2302.10800
N/A
0DataRank · unranked
0 citations

Tim Putman, Kevin Schaper, Deepak R Unni, Harshad Hegde, Tiffany J. Callahan +21 more

A Simple Standard for Ontological Mappings 2023: Updates on data model, collaborations and tooling

Zenodo (CERN European Organization for Nuclear Research)(2023)10.5281/zenodo.8202395
N/A
0DataRank · unranked
0 citations

Ian Braun, Anita R. Caron, Damien Goutte-Gattat, Benjamin M. Gyori, Nomi L. Harris +11 more

Structured Prompt Interrogation and Recursive Extraction of Semantics (SPIRES): a method for populating knowledge bases using zero-shot learning

Bioinformatics(2024)10.1093/bioinformatics/btae104
N/A
0DataRank · unranked
105 citations

Harshad Hegde, Vincent Emonet, Nomi L. Harris, Marcin P. Joachimiak, Nicolas A Matentzoglu +7 more

KG-Hub—building and exchanging biological knowledge graphs

Bioinformatics(2023)10.1093/bioinformatics/btad418
N/A
0DataRank · unranked
35 citations

Tim Putman, Kevin Schaper, Deepak R Unni, Harshad Hegde, Tiffany J. Callahan +21 more

CurateGPT: A flexible language-model assisted biocuration tool

arXiv (Cornell University)(2024)10.48550/arxiv.2411.00046
N/A
0DataRank · unranked
8 citations

Carlo Kroll, Shawn T. O’Neil, Justin T Reese, Marcin P. Joachimiak, Harshad Hegde +8 more

Mondo: integrating disease terminology across communities

Genetics(2025)10.1093/genetics/iyaf215
N/A
0DataRank · unranked
16 citations

Sabrina Toro, Nicolas A Matentzoglu, Joseph E Flack, Kathleen R. Mullen, Harshad Hegde +95 more

LinkML: an open data modeling framework

GigaScience(2025)10.1093/gigascience/giaf152
N/A
0DataRank · unranked
4 citations

Harold R. Solbrig, Nomi L. Harris, Patrick Kalita, Mark A. Miller, Sagar Patil +63 more

Predicting nutrition and environmental factors associated with female reproductive disorders using a knowledge graph and random forests

International Journal of Medical Informatics(2024)10.1016/j.ijmedinf.2024.105461
N/A
0DataRank · unranked
5 citations

Elena Casiraghi, Justin T Reese, Quaker E. Harmon, Kevin Schaper, Harshad Hegde +8 more

Unifying the identification of biomedical entities with the Bioregistry

Scientific Data(2022)10.1038/s41597-022-01807-3
N/A
0DataRank · unranked
33 citations

Meghan A. Balk, Tiffany J. Callahan, Daniel Domingo-Fernández, Melissa A Haendel, Harshad Hegde +14 more