Richard W. Pastor

Also affiliated with National Heart Lung and Blood Institute, Check Point (Israel)

Biochemistry, Genetics and Molecular BiologyPhysics and AstronomyEngineeringImmunology and Microbiology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 31 papers. Top paper: “Molecular Structure of Sphingomyelin in Fluid Phase Bilayers Determined by the Joint Analysis of Small-Angle Neutron and X-ray Scattering Data”.

Molecular Structure of Sphingomyelin in Fluid Phase Bilayers Determined by the Joint Analysis of Small-Angle Neutron and X-ray Scattering Data

The Journal of Physical Chemistry B(2020)10.1021/acs.jpcb.0c03389

N/A

0.587DataRank · unranked

49 citations

Norbert Kučerka, Jacob J. Kinnun, Jianjun Pan, Drew Marquardt, Haden L. Scott +6 more

Flipped C-Terminal Ends of APOA1 Promote ABCA1-Dependent Cholesterol Efflux by Small HDLs

Circulation(2023)10.1161/circulationaha.123.065959

N/A

0.546DataRank · unranked

37 citations

Chiara Pavanello, Patrick M. Hutchins, Chongren Tang, Mohsen Pourmousa, Tomáš Vaisar +11 more

Characterization of Specific Ion Effects on PI(4,5)P2Clustering: Molecular Dynamics Simulations and Graph-Theoretic Analysis

The Journal of Physical Chemistry B(2020)10.1021/acs.jpcb.9b10951

N/A

0DataRank · unranked

29 citations

Arne Gericke, Richard W. Pastor, Kyungreem Han

PLD2–PI(4,5)P2 interactions in fluid phase membranes: Structural modeling and molecular dynamics simulations

PLoS ONE(2020)10.1371/journal.pone.0236201

N/A

0DataRank · unranked

9 citations

Richard W. Pastor, Cristina Fenollar‐Ferrer, Kyungreem Han

Incorporation of α-methylated amino acids into Apolipoprotein A-I mimetic peptides improves their helicity and cholesterol efflux potential

Biochemical and Biophysical Research Communications(2020)10.1016/j.bbrc.2020.03.070

N/A

0DataRank · unranked

10 citations

Denis Sviridov, Steven K. Drake, Jude Tunyi, Galina Abdoulaeva, Lita A. Freeman +3 more

Semi-Automated Optimization of the CHARMM36 Lipid Force Field to Include Explicit Treatment of Long-Range Dispersion

ChemRxiv(2020)10.26434/chemrxiv.13480434

N/A

0DataRank · unranked

10 citations

Andreas Krämer, Andrew C. Simmonett, Rick Venable, Alexander D. MacKerell, Jeffery B. Klauda +3 more

CHARMM36 Lipid Force Field with Explicit Treatment of Long-Range Dispersion: Parametrization and Validation for PE, PG, and Ether Lipids

ChemRxiv(2020)10.26434/chemrxiv.13480437.v1

N/A

0DataRank · unranked

0 citations

Andreas Krämer, Rick Venable, Bernard R. Brooks, Jeffery B. Klauda, Richard W. Pastor +1 more

Semi-Automated Optimization of the CHARMM36 Lipid Force Field to Include Explicit Treatment of Long-Range Dispersion

ChemRxiv(2020)10.26434/chemrxiv.13480434.v1

N/A

0DataRank · unranked

0 citations

Andreas Krämer, Andrew C. Simmonett, Rick Venable, Alexander D. MacKerell, Jeffery B. Klauda +3 more

CHARMM36 Lipid Force Field with Explicit Treatment of Long-Range Dispersion: Parametrization and Validation for PE, PG, and Ether Lipids

ChemRxiv(2020)10.26434/chemrxiv.13480437

N/A

0DataRank · unranked

0 citations

Andreas Krämer, Rick Venable, Bernard R. Brooks, Jeffery B. Klauda, Richard W. Pastor +1 more

CHARMM36 Lipid Force Field with Explicit Treatment of Long-Range Dispersion: Parametrization and Validation for Phosphatidylethanolamine, Phosphatidylglycerol, and Ether Lipids

Journal of Chemical Theory and Computation(2021)10.1021/acs.jctc.0c01327

N/A

0DataRank · unranked

118 citations

Andreas Krämer, Richard M. Venable, Bernard R. Brooks, Jeffery B. Klauda, Richard W. Pastor +1 more

Semi-automated Optimization of the CHARMM36 Lipid Force Field to Include Explicit Treatment of Long-Range Dispersion

Journal of Chemical Theory and Computation(2021)10.1021/acs.jctc.0c01326

N/A

0DataRank · unranked

78 citations

Andreas Krämer, Richard M. Venable, Andrew C. Simmonett, Alexander D. MacKerell, Jeffery B. Klauda +3 more

Developing initial conditions for simulations of asymmetric membranes: a practical recommendation

Biophysical Journal(2021)10.1016/j.bpj.2021.10.009

N/A

0DataRank · unranked

43 citations

Wonpil Im, Richard W. Pastor, Soohyung Park

Location and Conformational Ensemble of Menaquinone and Menaquinol, and Protein–Lipid Modulations in Archaeal Membranes

The Journal of Physical Chemistry B(2021)10.1021/acs.jpcb.1c01930

N/A

0DataRank · unranked

12 citations

Ruixing Wang, Richard W. Pastor, Jeffery B. Klauda, Wonpil Im, Shasha Feng

Functional Group Distributions, Partition Coefficients, and Resistance Factors in Lipid Bilayers Using Site Identification by Ligand Competitive Saturation

Journal of Chemical Theory and Computation(2021)10.1021/acs.jctc.1c00089

N/A

0DataRank · unranked

10 citations

Poonam Pandey, Richard W. Pastor, Alexander D. MacKerell, Christoffer Lind

Development of CHARMM Additive Potential Energy Parameters for α-Methyl Amino Acids

The Journal of Physical Chemistry B(2021)10.1021/acs.jpcb.1c07202

N/A

0DataRank · unranked

1 citations

Wenbo Yu, Asaminew H. Aytenfisu, Jude Tunyi, Richard M. Venable, Alexander D. MacKerell +2 more

Planar aggregation of the influenza viral fusion peptide alters membrane structure and hydration, promoting poration

Nature Communications(2022)10.1038/s41467-022-34576-z

N/A

0DataRank · unranked

30 citations

Sourav Haldar, Eric Wang, Paul S. Blank, Sergey A. Akimov, Timur R. Galimzyanov +3 more

Initiation and evolution of pores formed by influenza fusion peptides probed by lysolipid inclusion

Biophysical Journal(2022)10.1016/j.bpj.2022.12.029

N/A

0DataRank · unranked

14 citations

Joshua Zimmerberg, Richard W. Pastor, Amy Rice

Finite-Size Effects in Simulations of Peptide/Lipid Assembly

The Journal of Membrane Biology(2022)10.1007/s00232-022-00255-9

N/A

0DataRank · unranked

6 citations

Olivia Agolini, Richard W. Pastor, Zack Jarin

Drude Polarizable Lipid Force Field with Explicit Treatment of Long-Range Dispersion: Parametrization and Validation for Saturated and Monounsaturated Zwitterionic Lipids

Journal of Chemical Theory and Computation(2023)10.1021/acs.jctc.3c00203

N/A

0DataRank · unranked

38 citations

Richard M. Venable, Jonathan Thirman, Payal Chatterjee, Anmol Kumar, Richard W. Pastor +4 more

Surface viscosities of lipid bilayers determined from equilibrium molecular dynamics simulations

Biophysical Journal(2023)10.1016/j.bpj.2023.01.038

N/A

0DataRank · unranked

17 citations

Richard M. Venable, Richard W. Pastor, Edward Lyman, J.E.F. Fitzgerald

Short hydrocarbon stapled ApoC2-mimetic peptides activate lipoprotein lipase and lower plasma triglycerides in mice

Frontiers in Cardiovascular Medicine(2023)10.3389/fcvm.2023.1223920

N/A

0DataRank · unranked

8 citations

Amaury Dasseux, Mart Reimund, Milton Pryor, Steven K. Drake, Zack Jarin +4 more

Spontaneous curvature generation by peptides in asymmetric bilayers

Journal of Computational Chemistry(2023)10.1002/jcc.27261

N/A

0DataRank · unranked

8 citations

Amy Rice, Wonpil Im, Richard W. Pastor, Soohyung Park

CHARMM at 45: Enhancements in Accessibility, Functionality, and Speed

The Journal of Physical Chemistry B(2024)10.1021/acs.jpcb.4c04100

N/A

0DataRank · unranked

116 citations

Steven L. Austin, Arnaud Blondel, Eric D. Boittier, Stefan Boresch, Matthias Buck +68 more

Ion-Induced PIP2 Clustering with Martini3: Modification of Phosphate–Ion Interactions and Comparison with CHARMM36

The Journal of Physical Chemistry B(2024)10.1021/acs.jpcb.3c06523

N/A

0DataRank · unranked

8 citations

Richard M. Venable, Kyungreem Han, Richard W. Pastor, Zack Jarin

Investigating How Lysophosphatidylcholine and Lysophosphatidylethanolamine Enhance the Membrane Permeabilization Efficacy of Host Defense Peptide Piscidin 1

The Journal of Physical Chemistry B(2024)10.1021/acs.jpcb.4c05845

N/A

0DataRank · unranked

6 citations

Andriana C. Zourou, Evan P. Goodell, Riqiang Fu, Richard W. Pastor, Myriam L. Cotten +1 more

Simulating asymmetric membranes using P21 periodic boundary conditions

Methods in enzymology on CD-ROM/Methods in enzymology(2024)10.1016/bs.mie.2024.03.013

N/A

0DataRank · unranked

3 citations

Samarjeet Prasad, Bernard R. Brooks, Richard W. Pastor, Amy Rice

Binary bilayer simulations for partitioning within membranes

Methods in enzymology on CD-ROM/Methods in enzymology(2024)10.1016/bs.mie.2024.03.007

N/A

0DataRank · unranked

1 citations

Richard W. Pastor, Wonpil Im, Soohyung Park

Planar aggregation of the influenza viral fusion peptide alters membrane structure and promotes poration

(2024)10.17952/37eps.2024.p2296

N/A

0DataRank · unranked

0 citations

Amy Rice, Paul S. Blank, Joshua Zimmerberg, Richard W. Pastor

Membrane permeability of small molecules from unbiased molecular dynamics simulations

The Journal of Chemical Physics(2020)10.1063/5.0013429

N/A

0DataRank · unranked

71 citations

An Ghysels, Eric Wang, Richard M. Venable, Jeffery B. Klauda, Bernard R. Brooks +2 more

Effects of a Polarizable Force Field on Membrane Dynamics: Surface Viscosity, Lipid Diffusion, and Peptide Induced Pore Formation

Journal of Computational Chemistry(2025)10.1002/jcc.70001

N/A

0DataRank · unranked

7 citations

Anthony J. Pane, Amy Rice, Richard W. Pastor, Richard M. Venable

A dual apolipoprotein C-II mimetic–apolipoprotein C-III antagonist peptide lowers plasma triglycerides

Science Translational Medicine(2020)10.1126/scitranslmed.aaw7905

N/A

0DataRank · unranked

68 citations

Larry Lo, Denis Sviridov, Mohsen Pourmousa, Milton Pryor, Soumitra S. Ghosh +16 more