Lee S. Katz

National Center for Emerging and Zoonotic Infectious Diseases

Also affiliated with Waterborne Environmental (United States)

Agricultural and Biological SciencesBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 7 papers. Top paper: “Sepia, a taxonomy oriented read classifier in Rust”.

Sepia, a taxonomy oriented read classifier in Rust

The Journal of Open Source Software(2021)10.21105/joss.03839

N/A

0DataRank · unranked

3 citations

Lee S. Katz, Henk C. den Bakker

SneakerNet: A modular quality assurance and quality check workflow for primary genomic and metagenomic read data

The Journal of Open Source Software(2021)10.21105/joss.02334

N/A

0DataRank · unranked

4 citations

Curtis J. Kapsak, Jessica Chen, Henk C. den Bakker, Grant Williams, Alyssa Kelley +3 more

Future-proofing and maximizing the utility of metadata: The PHA4GE SARS-CoV-2 contextual data specification package

GigaScience(2022)10.1093/gigascience/giac003

N/A

0DataRank · unranked

46 citations

Ruth Timme, Catarina Inês Mendes, Andrew J. Page, Nabil-Fareed Alikhan, Daniel Fornika +28 more

PHA4GE quality control contextual data tags: standardized annotations for sharing public health sequence datasets with known quality issues to facilitate testing and training

Microbial Genomics(2024)10.1099/mgen.0.001260

N/A

0DataRank · unranked

5 citations

Catarina Inês Mendes, Finlay Maguire, Jennifer L. Guthrie, Bryan A. Wee, Sarah E. Schmedes +18 more

hAMRonization: Enhancing antimicrobial resistance prediction using the PHA4GE AMR detection specification and tooling

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.07.583950

N/A

0DataRank · unranked

22 citations

Emma Griffiths, Alex Manuele, Daniel Fornika, Simon H. Tausch, Thanh Le-Viet +36 more

Fasten: a toolkit for streaming operations on fastqfiles

The Journal of Open Source Software(2024)10.21105/joss.06030

N/A

0DataRank · unranked

0 citations

John H. Phan, Henk C. den Bakker, Lee S. Katz

primerForge: a Python program for identifying primerpairs capable of distinguishing groups of genomes from eachother

The Journal of Open Source Software(2024)10.21105/joss.06850

N/A

0DataRank · unranked

0 citations

Lee S. Katz, Grant M. Williams, Jessica Chen, Joseph S. Wirth