Allison R. Greenplate

Also affiliated with Parker Institute for Cancer Immunotherapy, Translational Therapeutics (United States), Institute of Immunology, Immune Regulation (United Kingdom), University of Pennsylvania

Biochemistry, Genetics and Molecular BiologyMedicineImmunology and Microbiology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 51 papers. Top paper: “Deep immune profiling of COVID-19 patients reveals distinct immunotypes with therapeutic implications”.

Deep immune profiling of COVID-19 patients reveals distinct immunotypes with therapeutic implications

Science(2020)10.1126/science.abc8511

N/A

14.5DataRank · unranked

1659 citations

Josephine R. Giles, Amy E. Baxter, Derek A. Oldridge, Allison R. Greenplate, Jennifer E. Wu +50 more

mRNA vaccines induce durable immune memory to SARS-CoV-2 and variants of concern

Science(2021)10.1126/science.abm0829

N/A

1.0DataRank · unranked

945 citations

Mark M. Painter, Sokratis A. Apostolidis, Divij Mathew, Wenzhao Meng, Aaron M. Rosenfeld +42 more

Comprehensive mapping of immune perturbations associated with severe COVID-19

Science Immunology(2020)10.1126/sciimmunol.abd7114

N/A

1.0DataRank · unranked

799 citations

M. Betina Pampena, Wenzhao Meng, Aaron M. Rosenfeld, C.A.G. Ittner, Ariel R. Weisman +26 more

Seasonal human coronavirus antibodies are boosted upon SARS-CoV-2 infection but not associated with protection

Cell(2021)10.1016/j.cell.2021.02.010

N/A

0.905DataRank · unranked

416 citations

Eileen C. Goodwin, Anurag Verma, Claudia P. Arevalo, Marcus J. Bolton, Madison E. Weirick +33 more

Epigenetic scarring of exhausted T cells hinders memory differentiation upon eliminating chronic antigenic stimulation

Nature Immunology(2021)10.1038/s41590-021-00975-5

N/A

0.827DataRank · unranked

247 citations

Sasikanth Manne, Jean‐Christophe Beltra, Erietta Stelekati, Zeyu Chen, Kito Nzingha +8 more

In vivo CD8+ T cell CRISPR screening reveals control by Fli1 in infection and cancer

Cell(2021)10.1016/j.cell.2021.02.019

N/A

0.809DataRank · unranked

219 citations

Eri Arai, Omar Khan, Zhen Zhang, Shin Foong Ngiow, Yuan He +23 more

Deep immune profiling of MIS-C demonstrates marked but transient immune activation compared with adult and pediatric COVID-19

Science Immunology(2021)10.1126/sciimmunol.abf7570

N/A

0.800DataRank · unranked

206 citations

Josephine R. Giles, Amy E. Baxter, Derek A. Oldridge, Caroline Diorio, Leticia Kuri-Cervantes +59 more

SARS-CoV-2 infections elicit higher levels of original antigenic sin antibodies compared with SARS-CoV-2 mRNA vaccinations

Cell Reports(2022)10.1016/j.celrep.2022.111496

N/A

0.561DataRank · unranked

41 citations

Shuk Hang Li, Moses Awofolaju, Theresa Eilola, Eileen C. Goodwin, Marcus J. Bolton +20 more

Efficient recall of Omicron-reactive B cell memory after a third dose of SARS-CoV-2 mRNA vaccine

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.02.20.481163

N/A

0.477DataRank · unranked

23 citations

Mark M. Painter, Kendall A. Lundgreen, Sokratis A. Apostolidis, Amy E. Baxter, Josephine R. Giles +33 more

Cytometry masked autoencoder: An accurate and interpretable automated immunophenotyper

Cell Reports Medicine(2024)10.1016/j.xcrm.2024.101808

N/A

0.292DataRank · unranked

6 citations

Matei Ionita, Matthew Lee, Michelle L. McKeague, Ajinkya Pattekar, Mark M. Painter +32 more

Induction of a CD8 T cell intrinsic DNA damage and repair response is associated with clinical response to PD-1 blockade in uterine cancer

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.16.488552

N/A

0.269DataRank · unranked

5 citations

Sasikanth Manne, Nils Wellhausen, Derek A. Oldridge, Allison R. Greenplate, Lakshmi Chilukuri +10 more

High-throughput interrogation of immune responses using the Human Immune Profiling Pipeline

STAR Protocols(2023)10.1016/j.xpro.2023.102289

N/A

0.241DataRank · unranked

4 citations

Olga Lyudovyk, Justin Kim, Ya-Hui Lin, Yuval Elhanati, Divij Mathew +7 more

Inhibitory signaling sustains a distinct early memory CD8 + T cell precursor that is resistant to DNA damage

Science Immunology(2021)10.1126/sciimmunol.abe3702

N/A

0DataRank · unranked

92 citations

Yuki Muroyama, Shin Foong Ngiow, Zeyu Chen, Sasikanth Manne, Zhangying Cai +23 more

Germinal center responses to SARS-CoV-2 mRNA vaccines in healthy and immunocompromised individuals

medRxiv(2021)10.1101/2021.09.16.21263686

N/A

0DataRank · unranked

29 citations

Kalpana Parvathaneni, Mark M. Painter, Emily Bettini, Divyansh Agarwal, Kendall A. Lundgreen +21 more

mRNA Vaccination Induces Durable Immune Memory to SARS-CoV-2 with Continued Evolution to Variants of Concern

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.08.23.457229

N/A

0DataRank · unranked

64 citations

Mark M. Painter, Sokratis A. Apostolidis, Divij Mathew, Wenzhao Meng, Aaron M. Rosenfeld +42 more

Altered cellular and humoral immune responses following SARS-CoV-2 mRNA vaccination in patients with multiple sclerosis on anti-CD20 therapy

medRxiv(2021)10.1101/2021.06.23.21259389

N/A

0DataRank · unranked

39 citations

Mihir Kakara, Mark M. Painter, Rishi Raj Goel, Divij Mathew, Kerry Lenzi +23 more

Rapid induction of antigen-specific CD4 + T cells guides coordinated humoral and cellular immune responses to SARS-CoV-2 mRNA vaccination

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.21.440862

N/A

0DataRank · unranked

27 citations

Divij Mathew, Rishi Raj Goel, Sokratis A. Apostolidis, Ajinkya Pattekar, Oliva Kuthuru +27 more

Signaling through FcγRIIA and the C5a-C5aR pathway mediates platelet hyperactivation in COVID-19

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.01.442279

N/A

0DataRank · unranked

13 citations

Amrita Sarkar, H.M. Giannini, Rishi Raj Goel, Divij Mathew, Aae Suzuki +31 more

SARS-CoV-2 infections elicit higher levels of original antigenic sin antibodies compared to SARS-CoV-2 mRNA vaccinations

medRxiv(2021)10.1101/2021.09.30.21264363

N/A

0DataRank · unranked

6 citations

Theresa Eilola, Eileen C. Goodwin, Marcus J. Bolton, Sigrid Gouma, Rishi Raj Goel +16 more

Antigenic and virological properties of an H3N2 variant that will likely dominate the 2021-2022 Northern Hemisphere influenza season

medRxiv(2021)10.1101/2021.12.15.21267857

N/A

0DataRank · unranked

5 citations

Jordan T. Ort, Ryan McBride, Nicholas J. Swanson, Jo Wilson, Moses Awofolaju +6 more

38 Spatial immune profiling of human glioblastoma tissue reveals the presence of aggregated lymphoid niches in the tumor microenvironment

Regular and Young Investigator Award Abstracts(2021)10.1136/jitc-2021-sitc2021.038

N/A

0DataRank · unranked

0 citations

Asa A. Brockman, Sierra Barone, Madeline Hayes, Caroline E. Roe, Justine Sinnaeve +10 more

Efficient recall of Omicron-reactive B cell memory after a third dose of SARS-CoV-2 mRNA vaccine

Cell(2022)10.1016/j.cell.2022.04.009

N/A

0DataRank · unranked

217 citations

Mark M. Painter, Kendall A. Lundgreen, Sokratis A. Apostolidis, Amy E. Baxter, Josephine R. Giles +33 more

Germinal center responses to SARS-CoV-2 mRNA vaccines in healthy and immunocompromised individuals

Cell(2022)10.1016/j.cell.2022.01.027

N/A

0DataRank · unranked

176 citations

Emily Bettini, Kalpana Parvathaneni, Mark M. Painter, Divyansh Agarwal, Kendall A. Lundgreen +27 more

Signaling Through FcγRIIA and the C5a-C5aR Pathway Mediate Platelet Hyperactivation in COVID-19

Frontiers in Immunology(2022)10.3389/fimmu.2022.834988

N/A

0DataRank · unranked

54 citations

Amrita Sarkar, H.M. Giannini, Rishi Raj Goel, Divij Mathew, Aae Suzuki +32 more

Antigenic and virological properties of an H3N2 variant that continues to dominate the 2021–22 Northern Hemisphere influenza season

Cell Reports(2022)10.1016/j.celrep.2022.110897

N/A

0DataRank · unranked

46 citations

Jordan T. Ort, Ryan McBride, Nicholas J. Swanson, Jo Wilson, Moses Awofolaju +7 more

A boost with SARS-CoV-2 BNT162b2 mRNA vaccine elicits strong humoral responses independently of the interval between the first two doses

Cell Reports(2022)10.1016/j.celrep.2022.111554

N/A

0DataRank · unranked

27 citations

Shang Yu Gong, Debashree Chatterjee, Shilei Ding, Mark M. Painter, Rishi Raj Goel +27 more

An extended SARS-CoV-2 mRNA vaccine prime-boost interval enhances B cell immunity with limited impact on T cells

iScience(2022)10.1016/j.isci.2022.105904

N/A

0DataRank · unranked

24 citations

Gérémy Sannier, Mathieu Dubé, Manon Nayrac, Alexandra Tauzin, Mark M. Painter +17 more

A boost with SARS-CoV-2 BNT162b2 mRNA vaccine elicits strong humoral responses independently of the interval between the first two doses

medRxiv(2022)10.1101/2022.04.18.22273967

N/A

0DataRank · unranked

8 citations

Shang Yu Gong, Mark M. Painter, Rishi Raj Goel, Debashree Chatterjee, Guillaume Beaudoin-Bussières +25 more

A long interval between priming and boosting SARS-CoV-2 mRNA vaccine doses enhances B cell responses with limited impact on T cell immunity

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.03.502672

N/A

0DataRank · unranked

2 citations

Gérémy Sannier, Mathieu Dubé, Manon Nayrac, Mark M. Painter, Rishi Raj Goel +15 more

Distinct Heterogeneity in the Naive T cell Compartments of Children and Adults

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.04.510869

N/A

0DataRank · unranked

2 citations

Zachary Thomson, Ziyuan He, Elliott Swanson, Katherine Henderson, Mark-Phillip Pebworth +27 more

Serotonin reduction in post-acute sequelae of viral infection

Cell(2023)10.1016/j.cell.2023.09.013

N/A

0DataRank · unranked

362 citations

Ashwarya S. Devason, Iboro C. Umana, Timothy Cox, Lenka Dohnalová, Lev Litichevskiy +54 more

Prior vaccination promotes early activation of memory T cells and enhances immune responses during SARS-CoV-2 breakthrough infection

Nature Immunology(2023)10.1038/s41590-023-01613-y

N/A

0DataRank · unranked

109 citations

Timothy S. Johnston, Kendall A. Lundgreen, Jefferson Santos, Juliana S. Qin, Rishi Raj Goel +55 more

Trimodal single-cell profiling reveals a novel pediatric CD8αα+ T cell subset and broad age-related molecular reprogramming across the T cell compartment

Nature Immunology(2023)10.1038/s41590-023-01641-8

N/A

0DataRank · unranked

40 citations

Ziyuan He, Elliott Swanson, Katherine Henderson, Cole Phalen, Samir Rachid Zaim +29 more

Prior vaccination enhances immune responses during SARS-CoV-2 breakthrough infection with early activation of memory T cells followed by production of potent neutralizing antibodies

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.02.05.527215

N/A

0DataRank · unranked

8 citations

Timothy S. Johnston, Kendall A. Lundgreen, Jefferson Santos, Juliana S. Qin, Rishi Raj Goel +32 more

Immunologic predictors of vaccine responsiveness in patients with lymphoma and CLL

medRxiv(2023)10.1101/2023.09.26.23295903

N/A

0DataRank · unranked

0 citations

Kingsley Gideon Kumashie, Emeline R. Chong, Joseph Fabrizio, Aditi Gupta, Jakub Svoboda +38 more

Immunologic Predictors of Vaccine Responsiveness in Patients With Lymphoma and Chronic Lymphocytic Leukemia

The Journal of Infectious Diseases(2024)10.1093/infdis/jiae106

N/A

0DataRank · unranked

5 citations

Kingsley Gideon Kumashie, Emeline R. Chong, Joseph Fabrizio, Aditi Gupta, Jakub Svoboda +38 more

Automated Cytometric Gating with Human-Level Performance Using Bivariate Segmentation

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.05.06.592739

N/A

0DataRank · unranked

2 citations

Matei Ionita, Yanbo Feng, Yinfeng Lu, Patryk Orzechowski, Sumita Garai +14 more

Automated cytometric gating with human-level performance using bivariate segmentation

Nature Communications(2025)10.1038/s41467-025-56622-2

N/A

0DataRank · unranked

8 citations

Matei Ionita, Yanbo Feng, Yinfeng Lu, Patryk Orzechowski, Sumita Garai +14 more

Cleanet: robust doublet detection in cytometry data based on protein expression patterns

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.01.09.632259

N/A

0DataRank · unranked

0 citations

Michelle L. McKeague, Mark M. Painter, Divij Mathew, Ajinkya Pattekar, Damián Maseda +3 more

Cleanet: Robust Doublet Detection in Cytometry Data Based on Protein Expression Patterns

Cytometry Part A(2025)10.1002/cyto.a.24961

N/A

0DataRank · unranked

0 citations

Michelle L. McKeague, Mark M. Painter, Divij Mathew, Ajinkya Pattekar, Ayman Rezk +5 more

SARS-CoV-2 seroprevalence among parturient women in Philadelphia

Science Immunology(2020)10.1126/sciimmunol.abd5709

N/A

0DataRank · unranked

143 citations

Sigrid Gouma, Miren B. Dhudasia, Sagori Mukhopadhyay, Madeline R. Pfeifer, Emily C. Woodford +25 more

Unsupervised machine learning reveals risk stratifying glioblastoma tumor cells

eLife(2020)10.7554/elife.56879

N/A

0DataRank · unranked

33 citations

Justine Sinnaeve, Akshitkumar M. Mistry, Sierra Barone, Asa A. Brockman, Kirsten E. Diggins +8 more

Deep immune profiling of COVID-19 patients reveals patient heterogeneity and distinct immunotypes with implications for therapeutic interventions

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.20.106401

N/A

0DataRank · unranked

115 citations

Josephine R. Giles, Amy E. Baxter, Allison R. Greenplate, Jennifer E. Wu, Cécile Alanio +33 more

Seasonal human coronavirus antibodies are boosted upon SARS-CoV-2 infection but not associated with protection

medRxiv(2020)10.1101/2020.11.06.20227215

N/A

0DataRank · unranked

75 citations

Eileen C. Goodwin, Anurag Verma, Claudia P. Arevalo, Marcus J. Bolton, Madison E. Weirick +31 more

SARS-CoV-2 Seroprevalence Among Parturient Women

medRxiv(2020)10.1101/2020.07.08.20149179

N/A

0DataRank · unranked

20 citations

Sigrid Gouma, Miren B. Dhudasia, Sagori Mukhopadhyay, Madeline R. Pfeifer, Emily C. Woodford +25 more

SARS-CoV-2 Seroprevalence Among Parturient Women

Research Square (Research Square)(2020)10.21203/rs.3.rs-27402/v1

N/A

0DataRank · unranked

7 citations

Sigrid Gouma, Miren B. Dhudasia, Sagori Mukhopadhyay, Madeline R. Pfeifer, Emily C. Woodford +25 more

In vivo CRISPR screening identifies Fli1 as a transcriptional safeguard that restrains effector CD8 T cell differentiation during infection and cancer

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.20.087379

N/A

0DataRank · unranked

3 citations

Eri Arai, Omar Khan, Zhen Zhang, Shin Foong Ngiow, Yuan He +20 more

Distinct antibody and memory B cell responses in SARS-CoV-2 naïve and recovered individuals after mRNA vaccination

Science Immunology(2021)10.1126/sciimmunol.abi6950

N/A

0DataRank · unranked

734 citations

Sokratis A. Apostolidis, Mark M. Painter, Divij Mathew, Ajinkya Pattekar, Oliva Kuthuru +26 more

Cellular and humoral immune responses following SARS-CoV-2 mRNA vaccination in patients with multiple sclerosis on anti-CD20 therapy

Nature Medicine(2021)10.1038/s41591-021-01507-2

N/A

0DataRank · unranked

544 citations

Mihir Kakara, Mark M. Painter, Rishi Raj Goel, Divij Mathew, Kerry Lenzi +23 more

Rapid induction of antigen-specific CD4+ T cells is associated with coordinated humoral and cellular immunity to SARS-CoV-2 mRNA vaccination

Immunity(2021)10.1016/j.immuni.2021.08.001

N/A

0DataRank · unranked

522 citations

Divij Mathew, Rishi Raj Goel, Sokratis A. Apostolidis, Ajinkya Pattekar, Oliva Kuthuru +27 more

CD8+ T cells contribute to survival in patients with COVID-19 and hematologic cancer

Nature Medicine(2021)10.1038/s41591-021-01386-7

N/A

0DataRank · unranked

520 citations

Nicholas Han, Paul Wileyto, Justin Kim, Sigrid Gouma, James Robinson +55 more