William J. Zacharias

Cincinnati Children's Hospital Medical Center

Also affiliated with Perinatal Institute, University of Cincinnati, University of Cincinnati Medical Center

MedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 27 papers. Top paper: “Alveolar epithelial progenitor cells require Nkx2-1 to maintain progenitor-specific epigenomic state during lung homeostasis and regeneration”.

Alveolar epithelial progenitor cells require Nkx2-1 to maintain progenitor-specific epigenomic state during lung homeostasis and regeneration

Nature Communications(2023)10.1038/s41467-023-44184-0

N/A

0.985DataRank · unranked

46 citations

Paranthaman S. Kannan, John Snowball, Matthew Kofron, Joseph A. Wayman, James P. Bridges +4 more

The Cellular and Physiological Basis for Lung Repair and Regeneration: Past, Present, and Future

Cell stem cell(2020)10.1016/j.stem.2020.03.009

N/A

0.907DataRank · unranked

423 citations

Jeremy Katzen, Anna Engler, Minzhe Guo, Michael J. Herriges, Jaymin J. Kathiriya +11 more

PI3K signaling specifies proximal-distal fate by driving a developmental gene regulatory network in SOX9+ mouse lung progenitors

eLife(2022)10.7554/elife.67954

N/A

0.758DataRank · unranked

19 citations

Sharlene Fernandes, John Snowball, Minzhe Guo, Matthew C. Gillen, Suchi Singh Jain +4 more

Single Cell Multiomics Identifies Cells and Genetic Networks Underlying Alveolar Capillary Dysplasia

American Journal of Respiratory and Critical Care Medicine(2023)10.1164/rccm.202210-2015oc

N/A

0.546DataRank · unranked

37 citations

Kathryn A. Wikenheiser‐Brokamp, Joseph A. Kitzmiller, Cheng Jiang, Guolun Wang, Allen Wang +15 more

PI3K Signaling Specifies Proximal-Distal Fate by Driving a Developmental Gene Regulatory Network in Sox9+ Lung Progenitors

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.26.433053

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0DataRank · unranked

0 citations

Sharlene Fernandes, John Snowball, Minzhe Guo, Matthew C. Gillen, Deborah Sinner +3 more

Balance between protective and pathogenic immune responses to pneumonia in the neonatal lung enforced by gut microbiota

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.27.461705

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0DataRank · unranked

0 citations

Shelby Steinmeyer, Madeline Bonfield, Timothy C. Wang, Jerilyn K. Gray, Ian Lewkowich +11 more

The balance between protective and pathogenic immune responses to pneumonia in the neonatal lung is enforced by gut microbiota

Science Translational Medicine(2022)10.1126/scitranslmed.abl3981

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0DataRank · unranked

48 citations

Shelby Steinmeyer, Madeline Bonfield, Laura S. Peterson, Timothy Wang, Jerilyn K. Gray +12 more

Inflammatory blockade prevents injury to the developing pulmonary gas exchange surface in preterm primates

Science Translational Medicine(2022)10.1126/scitranslmed.abl8574

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0DataRank · unranked

27 citations

Shelby Steinmeyer, Paranthaman S. Kannan, Jerilyn K. Gray, Courtney M. Jackson, Shibabrata Mukherjee +28 more

A potent myeloid response is rapidly activated in the lungs of premature Rhesus macaques exposed to intra-uterine inflammation

Mucosal Immunology(2022)10.1038/s41385-022-00495-x

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0DataRank · unranked

7 citations

Martin Demmert, Shibabrata Mukherjee, Travis Isaacs, R.C.A. Thompson, Chase Chastain +13 more

Alveolar epithelial progenitor cells drive lung regeneration via dynamic changes in chromatin topology modulated by lineage-specific Nkx2-1 activity

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.30.505919

N/A

0DataRank · unranked

3 citations

Paranthaman S. Kannan, John Snowball, Matthew Kofron, Joseph A. Wayman, James P. Bridges +4 more

Epithelial Outgrowth Through Mesenchymal Rings Drives Alveologenesis

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.06.511160

N/A

0DataRank · unranked

1 citations

Yeongseo Son, Philip S. Crooke, Erin J. Plosa, John T. Benjamin, Christopher S. Jetter +18 more

Pioneer transcription factors coordinate active and repressive gene expression states to regulate cell fate

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.29.522251

N/A

0DataRank · unranked

0 citations

Marissa Granitto, Morgan Buckley, Joseph R Shiley, William J. Zacharias, Christopher N. Mayhew +3 more

Delayed Microbial Maturation Durably Exacerbates Th17-driven Asthma in Mice

American Journal of Respiratory Cell and Molecular Biology(2023)10.1165/rcmb.2022-0367oc

N/A

0DataRank · unranked

13 citations

Jaclyn W. McAlees, David Haslam, Simon Graspeuntner, Inken Schmudde, Yves Laumonnier +7 more

Obesity amplifies influenza virus-driven disease severity in male and female mice

Mucosal Immunology(2023)10.1016/j.mucimm.2023.09.004

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0DataRank · unranked

12 citations

Michelle S. M. A. Damen, Cassidy J Ulanowicz, Keisuke Sawada, Jarren R. Oates, Andrea Tóth +8 more

Pioneer and PRDM transcription factors coordinate bivalent epigenetic states to safeguard cell fate

Molecular Cell(2024)10.1016/j.molcel.2023.12.007

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0DataRank · unranked

47 citations

Marissa Granitto, Morgan Buckley, Katie Ludwig, Sandra Koigi, Joseph R Shiley +5 more

Obesity Uncovers the Presence of Inflammatory Lung Macrophage Subsets With an Adipose Tissue Transcriptomic Signature in Influenza Virus Infection

The Journal of Infectious Diseases(2024)10.1093/infdis/jiae535

N/A

0DataRank · unranked

9 citations

Cassidy J Ulanowicz, Michelle S. M. A. Damen, John Eom, Keisuke Sawada, Hak‐Jae Chung +9 more

Impact of Viral Lower Respiratory Tract Infection (LRTI) in Early Childhood (0–2 Years) on Lung Growth and Development and Lifelong Trajectories of Pulmonary Health: A National Institutes of Health (NIH) Workshop Summary

Pediatric Pulmonology(2024)10.1002/ppul.27357

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0DataRank · unranked

6 citations

Jeffrey A. Whitsett, William J. Zacharias, Sing Sing Way, Fernando Díaz‐Barriga, Joseph P. Mizgerd +12 more

The Homeobox Transcription Factor CUX1 Coordinates Postnatal Epithelial Developmental Timing but Is Dispensable for Lung Organogenesis and Regeneration

American Journal of Respiratory Cell and Molecular Biology(2024)10.1165/rcmb.2024-0147oc

N/A

0DataRank · unranked

4 citations

J Socha, Andrea Tóth, Sharlene Fernandes, Helen Warheit-Niemi, Brandy Ruff +5 more

Microbiota-derived inosine programs protective CD8 + T cell responses against influenza in newborns

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.04.09.588427

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0DataRank · unranked

4 citations

Erica Culberson, Jeremy M. Kinder, Alicia Ramiriqui, Jerilyn K. Gray, Madeline Bonfield +12 more

Microbiota-derived inosine programs protective CD8+ T cell responses against influenza in newborns

Cell(2025)10.1016/j.cell.2025.05.013

N/A

0DataRank · unranked

16 citations

Erica Culberson, Jeremy M. Kinder, Alicia Ramiriqui, Jerilyn K. Gray, Madeline Bonfield +14 more

Epithelial outgrowth through mesenchymal rings drives lung alveologenesis

JCI Insight(2025)10.1172/jci.insight.187876

N/A

0DataRank · unranked

9 citations

Yeongseo Son, Philip S. Crooke, Erin J. Plosa, John T. Benjamin, Christopher S. Jetter +20 more

Dysregulated alveolar type 2 epithelial cell proteostasis promotes fibrogenic macrophage migration inhibitory factor–CD74 signaling

Science Translational Medicine(2025)10.1126/scitranslmed.adr2277

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0DataRank · unranked

4 citations

Jessica Nouws, Jannik Ruwisch, Gavitt A. Woodard, Joseph Cooley, Johad Khoury +21 more

STAT3–BDNF–TrkB signalling promotes alveolar epithelial regeneration after lung injury

Nature Cell Biology(2020)10.1038/s41556-020-0569-x

N/A

0DataRank · unranked

144 citations

Katharina E. Hayer, Joseph H. Oved, Daphne C. Avgousti, Sushila A. Toulmin, Jarod A. Zepp +17 more

Maternal antibiotic exposure-mediated alterations in basal, and allergen-induced lung function are associated with altered recruitment of eosinophils to the developing lung

Frontiers in Immunology(2025)10.3389/fimmu.2025.1715675

N/A

0DataRank · unranked

1 citations

Rabia Ülkü Korkmaz, Jaclyn W. McAlees, Julie Hargis, Schmaiel Shirdel, Imke Lingel +14 more

Insulin-like Growth Factor 1 Supports a Pulmonary Niche that Promotes Type 3 Innate Lymphoid Cell Development in Newborn Lungs

Immunity(2020)10.1016/j.immuni.2020.01.005

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0DataRank · unranked

75 citations

Elizabeth van Acker, Madeline Bonfield, Timothy C. Wang, Jerilyn K. Gray, Ian Lang +8 more

Pulmonary Consequences of Prenatal Inflammatory Exposures: Clinical Perspective and Review of Basic Immunological Mechanisms

Frontiers in Immunology(2020)10.3389/fimmu.2020.01285

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0DataRank · unranked

49 citations

Shibabrata Mukherjee, Adrienne N. Wilburn, Christopher J Cates, Ian Lewkowich, Hitesh Deshmukh +3 more

Inflammatory blockade prevents injury to the developing pulmonary gas exchange surface in preterm primates

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.24.449766

N/A

0DataRank · unranked

3 citations

Shelby Steinmeyer, Paranthaman S. Kannan, Jerilyn K. Gray, Courtney M. Jackson, Shibabrata Mukherjee +28 more