Vivek B. Shenoy

Also affiliated with University of Pennsylvania

Biochemistry, Genetics and Molecular BiologyEngineering

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 6%percentile

0.241Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

O-SNAP: A comprehensive pipeline for spatial profiling of chromatin architecture

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.07.18.665612

Top 61%

0.241DataRank

Top 61%4 citations

José Luis Gómez Sarmiento, Flávio R. Palma, Aayush Kant, Ellen Y. Zhang, Zixian Guo +6 more

Papers

Driven by 37 papers — median percentile 39. Top paper: “Microtubule forces drive nuclear damage in LMNA cardiomyopathy”.

Microtubule forces drive nuclear damage in LMNA cardiomyopathy

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.10.579774

N/A

0.241DataRank · unranked

4 citations

Julie Heffler, Carmen Suay‐Corredera, Mohammad Dehghany, Kaitlyn M Shen, Noam Zuela-Sopilniak +7 more

O-SNAP: A comprehensive pipeline for spatial profiling of chromatin architecture

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.07.18.665612

Top 61%

0.241DataRank

Top 61%4 citations

José Luis Gómez Sarmiento, Flávio R. Palma, Aayush Kant, Ellen Y. Zhang, Zixian Guo +6 more

Nuclear softening expedites interstitial cell migration in fibrous networks and dense connective tissues

Science Advances(2020)10.1126/sciadv.aax5083

N/A

0DataRank · unranked

85 citations

Kwang Hoon Song, Shreyasi Thakur, Liane M. Miller, Xuan Cao, Ana P. Peredo +8 more

Long-range mechanical signaling in biological systems

Soft Matter(2020)10.1039/d0sm01442g

N/A

0DataRank · unranked

66 citations

Xingyu Chen, Thomas Leahy, Paul A. Janmey, Vivek B. Shenoy, Farid Alisafaei

Mechanisms of Local Stress Amplification in Axons near the Gray-White Matter Interface

Biophysical Journal(2020)10.1016/j.bpj.2020.08.024

N/A

0DataRank · unranked

29 citations

Ze Gong, Victoria E. Johnson, Jean-Pierre Dollé, Douglas H. Smith, Vivek B. Shenoy +1 more

Mechanical memory in cells emerges from mechanotransduction with transcriptional feedback and epigenetic plasticity

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.20.000802

N/A

0DataRank · unranked

28 citations

Vivek B. Shenoy, Amit Pathak, Jairaj Mathur

Enhanced substrate stress relaxation promotes filopodia-mediated cell migration

Nature Materials(2021)10.1038/s41563-021-00981-w

N/A

0DataRank · unranked

267 citations

Ze Gong, Jay Hou, Katrina M. Wisdom, Damien Garbett, Hong-pyo Lee +6 more

Surface-directed engineering of tissue anisotropy in microphysiological models of musculoskeletal tissue

Science Advances(2021)10.1126/sciadv.abe9446

N/A

0DataRank · unranked

86 citations

Farid Alisafaei, Alex Y. Yi, Hossein Ahmadzadeh, Insu Lee, Cassidy Blundell +7 more

Mechanosensitive smooth muscle cell phenotypic plasticity emerging from a null state and the balance between Rac and Rho

Cell Reports(2021)10.1016/j.celrep.2021.109019

N/A

0DataRank · unranked

37 citations

Aayush Kant, Tina Xu, Vivek B. Shenoy, Richard K. Assoian, Shefali Talwar

Recursive feedback between matrix dissipation and chemo-mechanical signaling drives oscillatory growth of cancer cell invadopodia

Cell Reports(2021)10.1016/j.celrep.2021.109047

N/A

0DataRank · unranked

31 citations

Katrina M. Wisdom, Eóin McEvoy, Julie Chang, Kolade Adebowale, Christopher C. Price +3 more

Soft robotic constrictor for in vitro modeling of dynamic tissue compression

Scientific Reports(2021)10.1038/s41598-021-94769-2

N/A

0DataRank · unranked

19 citations

Joseph W. Song, Ehsan Ban, Yuma Morimitsu, Chinedum O. Osuji, Vivek B. Shenoy +2 more

Chemo-Mechanical Cues Modulate Nano-Scale Chromatin Organization in Healthy and Diseased Connective Tissue Cells

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.27.441596

N/A

0DataRank · unranked

8 citations

Shreyasi Thakur, Xingyu Chen, Claudia Loebel, Boao Xia, Rowena McBeath +5 more

Programmable and Contractile Materials Through Cell Encapsulation in Fibrous Hydrogel Assemblies

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.19.440470

N/A

0DataRank · unranked

6 citations

Margaret E. Prendergast, Ehsan Ban, Karen Xu, Gabriel Mickel, Patricia Mensah +5 more

Dynamic Self-Reinforcement of Gene Expression Determines Acquisition and Retention of Cellular Mechanical Memory

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.23.449595

N/A

0DataRank · unranked

2 citations

Jairaj Mathur, Joel D. Boerckel, Amit Pathak, Vivek B. Shenoy, Christopher C. Price

Modeling the three-way feedback between cellular contractility, actin polymerization, and adhesion turnover resolves the contradictory effects of RhoA and Rac1 on endothelial junction dynamics

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.15.435512

N/A

0DataRank · unranked

0 citations

Tal Sneh, Emad Moeendarbary, Gloria E. Marino, Xingyu Chen, Jorge Escribano +7 more

Aberrant chromatin reorganization in cells from diseased fibrous connective tissue in response to altered chemomechanical cues

Nature Biomedical Engineering(2022)10.1038/s41551-022-00910-5

N/A

0DataRank · unranked

86 citations

Shreyasi Thakur, Xingyu Chen, Claudia Loebel, Boao Xia, Rowena McBeath +5 more

Feedback between mechanosensitive signaling and active forces governs endothelial junction integrity

Nature Communications(2022)10.1038/s41467-022-34701-y

N/A

0DataRank · unranked

50 citations

Tal Sneh, Emad Moeendarbary, Yousef Javanmardi, Nadia Efimova, Changsong Yang +10 more

Tension anisotropy drives phenotypic transitions of cells via two-way cell-ECM feedback

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.13.484154

N/A

0DataRank · unranked

12 citations

Delaram Shakiba, Leanne E. Iannucci, Matthew D. Davidson, Kenneth M. Pryse, Pen‐hsiu Grace Chao +6 more

Collagen microarchitecture mechanically controls myofibroblast differentiation

Proceedings of the National Academy of Sciences(2020)10.1073/pnas.1919394117

N/A

0DataRank · unranked

203 citations

Xingyu Chen, Ling Lu, Young Hye Song, Adrian A. Shimpi, Siyoung Choi +8 more

Lipid droplets are intracellular mechanical stressors that promote hepatocyte dedifferentiation

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.27.505524

N/A

0DataRank · unranked

0 citations

Farid Alisafaei, Aayush Kant, Paul A. Janmey, Vivek B. Shenoy, Rebecca G. Wells +1 more

Cell volume expansion and local contractility drive collective invasion of the basement membrane in breast cancer

Nature Materials(2023)10.1038/s41563-023-01716-9

N/A

0DataRank · unranked

64 citations

Aashrith Saraswathibhatla, Zhaoqiang Song, Sushama Varma, Colline Sanchez, Naomi Hassan Kahtan Alyafei +11 more

Lipid droplets are intracellular mechanical stressors that impair hepatocyte function

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2216811120

N/A

0DataRank · unranked

53 citations

Farid Alisafaei, Aayush Kant, David Li, Paul A. Janmey, Vivek B. Shenoy +2 more

Endothelium and Subendothelial Matrix Mechanics Modulate Cancer Cell Transendothelial Migration

Advanced Science(2023)10.1002/advs.202206554

N/A

0DataRank · unranked

32 citations

Ayushi Agrawal, Andrea Malandrino, Soufian Lasli, Michelle Chen, Somayeh Shahreza +14 more

Identification of CD44 as a key mediator of cell traction force generation in hyaluronic acid-rich extracellular matrices

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.24.563860

N/A

0DataRank · unranked

4 citations

Xingyu Chen, Hannah J. Davis, Cassidy S. Nordmann, Joshua Toth, Louis Hodgson +4 more

Active Transcription and Epigenetic Reactions Synergistically Regulate Meso-Scale Genomic Organization

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.21.537822

N/A

0DataRank · unranked

0 citations

Zixian Guo, Vinayak Vinayak, Maria Victoria Neguembor, Wing Shun Li, Vasundhara Agrawal +7 more

Microinterfaces in bicontinuous hydrogels guide rapid 3D cell migration

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.28.559609

N/A

0DataRank · unranked

0 citations

Nikolas Di Caprio, Hooman Fallahi, Mohammad Dehghany, Matthew D. Davidson, Brian C. H. Cheung +7 more

Microinterfaces in biopolymer-based bicontinuous hydrogels guide rapid 3D cell migration

Nature Communications(2024)10.1038/s41467-024-46774-y

N/A

0DataRank · unranked

43 citations

Nikolas Di Caprio, Hooman Fallahi, Mohammad Dehghany, Matthew D. Davidson, Lorielle Laforest +8 more

Lumen expansion is initially driven by apical actin polymerization followed by osmotic pressure in a human epiblast model

Cell stem cell(2024)10.1016/j.stem.2024.03.016

N/A

0DataRank · unranked

31 citations

A. P. Zakharov, Youngbin Lim, Alexander R. Dunn, Nidhi Bhutani, Vivek B. Shenoy +2 more

Active transcription and epigenetic reactions synergistically regulate meso-scale genomic organization

Nature Communications(2024)10.1038/s41467-024-48698-z

N/A

0DataRank · unranked

30 citations

Zixian Guo, Vinayak Vinayak, Maria Victoria Neguembor, Wing Shun Li, Vasundhara Agrawal +7 more

Identification of CD44 as a key engager to hyaluronic acid-rich extracellular matrices for cell traction force generation and tumor invasion in 3D

Matrix Biology(2024)10.1016/j.matbio.2024.11.004

N/A

0DataRank · unranked

25 citations

Xingyu Chen, Hannah J. Davis, Cassidy S. Nordmann, Joshua Toth, Louis Hodgson +4 more

Mechanical regulation of cellular energy metabolism in cancer microenvironments Short title: Mechano-metabolism of metastatic cells

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.04.30.591879

N/A

0DataRank · unranked

2 citations

Anuja Jaganathan, Ramin Basir, Laurent Pieuchot, Yihui Shen, Cynthia A. Reinhart‐King +2 more

Revealing the biophysics of lamina-associated domain formation by integrating theoretical modeling and high-resolution imaging

Nature Communications(2025)10.1038/s41467-025-63244-1

N/A

0DataRank · unranked

13 citations

Zixian Guo, Aayush Kant, Ramin Basir, Rohit Joshi, Vinayak Vinayak +5 more

Polymer model integrates imaging and sequencing to reveal how nanoscale heterochromatin domains influence gene expression

Nature Communications(2025)10.1038/s41467-025-59001-z

N/A

0DataRank · unranked

7 citations

Ramin Basir, Rosela Golloshi, Joshua Toth, Lucas E. Sant’Anna, Melike Lakadamyali +3 more

Wnt signaling modulates mechanotransduction in the epidermis to drive hair follicle regeneration

Science Advances(2025)10.1126/sciadv.adq0638

N/A

0DataRank · unranked

14 citations

Amrit Bagchi, Matthew J. Brukman, Joshua Toth, Jamie Ford, Ying Zheng +10 more

Digital light processing of hydrogel molds to guide cell mechanosensing and the fabrication of meniscal tissue constructs

APL Bioengineering(2025)10.1063/5.0289256

N/A

0DataRank · unranked

1 citations

Joshua Toth, Abhishek P. Dhand, Lovie Deloney, Mackenzie Obenreder, Vivek B. Shenoy +2 more

Collective invasion of the basement membrane in breast cancer driven by forces from cell volume expansion and local contractility

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.07.28.501930

N/A

0DataRank · unranked

2 citations

Aashrith Saraswathibhatla, Zhaoqiang Song, Sushama Varma, Colline Sanchez, Sucheta Srivastava +8 more

Effects of extracellular matrix viscoelasticity on cellular behaviour

Nature(2020)10.1038/s41586-020-2612-2

N/A

0DataRank · unranked

2214 citations

Justin J. Cooper‐White, Paul A. Janmey, David Mooney, Vivek B. Shenoy, Ovijit Chaudhuri

Vivek B. Shenoy

Indexed papers

Top data-sharing exemplar

Papers