🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Li‐Jun Ma

Amherst College

ORCID: 0000-0002-2733-3708

Also affiliated with University of Massachusetts Amherst

Biochemistry, Genetics and Molecular BiologyAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 3%percentile
0.996Author DataRank

Indexed papers

2in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Genome Sequence of Fusarium oxysporum f. sp. matthiolae, a Brassicaceae Pathogen

Molecular Plant-Microbe Interactions(2020)10.1094/mpmi-11-19-0324-a
Top 33%
0.595DataRank
Top 33%10 citations

Dilay Hazal Ayhan, Andrew C. Diener, Li‐Jun Ma, Houlin Yu

Papers

Driven by 18 papers — median percentile 61. Top paper: “Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium”.

Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium

Nature(2010)10.1038/nature08850
N/A
1.1DataRank · unranked
1810 citations

H. Charlotte van der Does, Katherine A. Borkovich, Jeffrey J. Coleman, Marie-Josée Daboussi, Antonio Di Pietro +79 more

Genome Sequence of Fusarium oxysporum f. sp. matthiolae, a Brassicaceae Pathogen

Molecular Plant-Microbe Interactions(2020)10.1094/mpmi-11-19-0324-a
Top 33%
0.595DataRank
Top 33%10 citations

Dilay Hazal Ayhan, Andrew C. Diener, Li‐Jun Ma, Houlin Yu

Genome Sequence Resource of Fusarium graminearum TaB10 and Fusarium avenaceum KA13, Causal Agents of Stored Apple Rot

Molecular Plant-Microbe Interactions(2022)10.1094/mpmi-03-22-0069-a
Top 46%
0.401DataRank
Top 46%8 citations

Jovana Hrustić, Nataša Vučinić, Li‐Jun Ma, Dilay Hazal Ayhan, Mila Grahovac +1 more

TEfinder: A Bioinformatics Pipeline for Detecting New Transposable Element Insertion Events in Next-Generation Sequencing Data

Genes(2021)10.3390/genes12020224
N/A
0DataRank · unranked
17 citations

Cristina López‐Díaz, Antonio Di Pietro, Li‐Jun Ma, Dilay Hazal Ayhan, Vista Sohrab

Metatranscriptomic comparison of endophytic and pathogenic Fusarium –Arabidopsis interactions reveals plant transcriptional plasticity

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.01.433437
N/A
0DataRank · unranked
1 citations

Houlin Yu, Bo Wang, Kathryn Vescio, Gregory A. DeIulio, Yang He +7 more

Differential Colonization of the Plant Vasculature Between Endophytic Versus Pathogenic Fusarium oxysporum Strains

Molecular Plant-Microbe Interactions(2022)10.1094/mpmi-08-22-0166-sc
N/A
0DataRank · unranked
44 citations

Houlin Yu, Kelly S. Allen, Li‐Jun Ma, Domingo Martínez‐Soto

Podocyte-Related Mechanisms Underlying Survival Benefit of Long-Term Angiotensin Receptor Blocker

International Journal of Molecular Sciences(2022)10.3390/ijms23116018
N/A
0DataRank · unranked
6 citations

Dan Gao, Vittorio Albertazzi, Jianyong Zhong, Li‐Jun Ma, Liping Du +5 more

Identification of novel basil downy mildew resistance genes using de novo comparative transcriptomics

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.23.491563
N/A
0DataRank · unranked
0 citations

Gregory A. DeIulio, Robert M. Pyne, Jacob Maman, Li Guo, Robert L. Wick +4 more

Conservation and Expansion of Transcriptional Factor Repertoire in the Fusarium oxysporum Species Complex

Journal of Fungi(2023)10.3390/jof9030359
N/A
0DataRank · unranked
6 citations

Yang He, Sajeet Haridas, Richard D. Hayes, Hunter Lynch, Sawyer Andersen +9 more

CUR (E)ating a new approach to study fungal effectors and enhance undergraduate education through authentic research

Biochemistry and Molecular Biology Education(2023)10.1002/bmb.21783
N/A
0DataRank · unranked
2 citations

Mai McWilliams, Matheus Francisco Barros Rodrigues, Benjamin Mearkle, Nader Jaafar, Vivek Golla +8 more

Low-Dose Erythropoietin Amplifies Beneficial Effects of Angiotensin II Blockade on Glomerulosclerosis

Laboratory Investigation(2023)10.1016/j.labinv.2022.100015
N/A
0DataRank · unranked
1 citations

Keizo Matsushita, Jianyong Zhong, Li‐Jun Ma, Haichun Yang, Agnes B. Fogo +1 more

Conservation and Expansion of Transcriptional Factor Repertoire in the Fusarium oxysporum Species Complex

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.02.09.527873
N/A
0DataRank · unranked
0 citations

Yang He, Sajeet Haridas, Richard D. Hayes, Hunter Lynch, Sawyer Andersen +8 more

CUR(E)ating a New Approach to Study Fungal Effectors and Enhance Undergraduate Education through Authentic Research

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.02.14.528535
N/A
0DataRank · unranked
0 citations

Mai McWilliams, Matheus Francisco Barros Rodrigues, Benjamin Mearkle, Nader Jaafar, Vivek Golla +8 more

Fungal effectors: past, present, and future

Current Opinion in Microbiology(2024)10.1016/j.mib.2024.102526
N/A
0DataRank · unranked
36 citations

Madison Newman, Houlin Yu, Maryam Rashidzade, Domingo Martínez‐Soto, Ana L. Caicedo +3 more

Virulence of Fusarium oxysporum strains causing corneal or plant disease is associated with their distinct accessory chromosomes

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.05.23.595639
N/A
0DataRank · unranked
3 citations

Serena Abbondante, Domingo Martínez‐Soto, Siyuan Wu, Ricardo Rodriguez-Vargas, Shira Milo +12 more

Host-specific adaptation in Fusarium oxysporum correlates with distinct accessory chromosome content in human and plant pathogenic strains

mBio(2025)10.1128/mbio.00951-25
N/A
0DataRank · unranked
5 citations

Serena Abbondante, Domingo Martínez‐Soto, Siyuan Wu, Ricardo Rodríguez-Vargas, Shira Milo +12 more

The genome of opportunistic fungal pathogen Fusarium oxysporum carries a unique set of lineage-specific chromosomes

Communications Biology(2020)10.1038/s42003-020-0770-2
N/A
0DataRank · unranked
109 citations

Yang He, David Turrà, Shiguo Zhou, Dilay Hazal Ayhan, Gregory A. DeIulio +18 more

Metatranscriptomic Comparison of Endophytic and Pathogenic Fusarium –Arabidopsis Interactions Reveals Plant Transcriptional Plasticity

Molecular Plant-Microbe Interactions(2021)10.1094/mpmi-03-21-0063-r
N/A
0DataRank · unranked
53 citations

Houlin Yu, Bo Wang, Kathryn Vescio, Gregory A. DeIulio, Yang He +7 more