Jan O. Korbel

Also affiliated with German Cancer Research Center, Heidelberg University, European Molecular Biology Laboratory

Biochemistry, Genetics and Molecular BiologyAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

28.0Author DataRank

Indexed papers

13in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 13 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

High-coverage whole-genome sequencing of the expanded 1000 Genomes Project cohort including 602 trios

Cell(2022)10.1016/j.cell.2022.08.004

Top 3%

6.3DataRank

Top 3%1056 citations

Uday S. Evani, Xuefang Zhao, Anna O. Basile, Haley Abel, Allison A. Regier +37 more

Papers

Driven by 48 papers — median percentile 86. Top paper: “Genomic basis for RNA alterations in cancer”.

Genomic basis for RNA alterations in cancer

Nature(2020)10.1038/s41586-020-1970-0

N/A

8.3DataRank · unranked

426 citations

Claudia Calabrese, Natalie R. Davidson, Deniz Demircioğlu, Nuno A. Fonseca, Yao He +56 more

Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing

Nature Genetics(2020)10.1038/s41588-019-0576-7

N/A

8.1DataRank · unranked

783 citations

Jake June-Koo Lee, Ruibin Xi, Dhawal Jain, Youngsook L. Jung, Lixing Yang +89 more

Pan-cancer analysis of whole genomes identifies driver rearrangements promoted by LINE-1 retrotransposition

Nature Genetics(2020)10.1038/s41588-019-0562-0

N/A

7.0DataRank · unranked

483 citations

Eva G. Alvarez, Adrian Baez‐Ortega, Jorge Zamora, Fran Supek, Jonas Demeulemeester +80 more

High-coverage whole-genome sequencing of the expanded 1000 Genomes Project cohort including 602 trios

Cell(2022)10.1016/j.cell.2022.08.004

Top 3%

6.3DataRank

Top 3%1056 citations

Uday S. Evani, Xuefang Zhao, Anna O. Basile, Haley Abel, Allison A. Regier +37 more

Targeted Perturb-seq enables genome-scale genetic screens in single cells

Nature Methods(2020)10.1038/s41592-020-0837-5

N/A

6.1DataRank · unranked

269 citations

Andreas R. Gschwind, Jennifer H. Milbank, Daniel R. Leonce, Petra Jakob, Lukas Mathur +5 more

Disruption of chromatin folding domains by somatic genomic rearrangements in human cancer

Nature Genetics(2020)10.1038/s41588-019-0564-y

N/A

5.9DataRank · unranked

312 citations

Victoria T. Le, Sahaana Chandran, Yilong Li, Roel G.W. Verhaak, Rameen Beroukhim +91 more

Haplotype-resolved diverse human genomes and integrated analysis of structural variation

Science(2021)10.1126/science.abf7117

Top 4%

5.7DataRank

Top 4%812 citations

Peter A. Audano, Qihui Zhu, Bernardo Rodríguez–Martín, David Porubsky, Marc Jan Bonder +60 more

A draft human pangenome reference

Nature(2023)10.1038/s41586-023-05896-x

Top 4%

5.1DataRank

Top 4%1169 citations

Mobin Asri, Jana Ebler, Daniel Doerr, Marina Haukness, Hickey, Glenn +95 more

Pangenome graph construction from genome alignments with Minigraph-Cactus

Nature Biotechnology(2023)10.1038/s41587-023-01793-w

N/A

5.0DataRank · unranked

318 citations

Jean Monlong, Jana Ebler, Adam M. Novak, Jordan M. Eizenga, Yan Gao +94 more

Sequence diversity analyses of an improved rhesus macaque genome enhance its biomedical utility

Science(2020)10.1126/science.abc6617

Top 6%

3.6DataRank

Top 6%201 citations

R. Alan Harris, Marina Haukness, Ian T. Fiddes, Shwetha C. Murali, Jason D. Fernandes +55 more

Pathway and network analysis of more than 2500 whole cancer genomes

Nature Communications(2020)10.1038/s41467-020-14367-0

Top 9%

2.3DataRank

Top 9%117 citations

David Haan, Marta Paczkowska, Lieven P. C. Verbeke, Miguél Vázquez, Abdullah Kahraman +95 more

High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterations

Nature Communications(2020)10.1038/s41467-019-13885-w

Top 13%

1.6DataRank

Top 13%76 citations

Fengju Chen, Nuno A. Fonseca, Yao He, Masashi Fujita, Hidewaki Nakagawa +91 more

Long-read sequencing and structural variant characterization in 1,019 samples from the 1000 Genomes Project

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.04.18.590093

Top 16%

1.3DataRank

Top 16%38 citations

Samarendra Pani, Bernardo Rodríguez–Martín, Jana Ebler, Carsten Hain, Vasiliki Tsapalou +10 more

Fully phased human genome assembly without parental data using single-cell strand sequencing and long reads

Nature Biotechnology(2020)10.1038/s41587-020-0719-5

N/A

0.815DataRank · unranked

228 citations

Peter Ebert, Peter A. Audano, Mitchell R. Vollger, William T. Harvey, Pierre Marijon +16 more

Assembly of 43 human Y chromosomes reveals extensive complexity and variation

Nature(2023)10.1038/s41586-023-06425-6

N/A

0.721DataRank · unranked

121 citations

Peter Ebert, Mark Loftus, Feyza Yilmaz, Peter A. Audano, Glennis A. Logsdon +27 more

Reconstruction of the human amylase locus reveals ancient duplications seeding modern-day variation

Science(2024)10.1126/science.adn0609

N/A

0.590DataRank · unranked

50 citations

Charikleia Karageorgiou, Kwondo Kim, Petar Pajic, Kendra Scheer, Christine R. Beck +18 more

Assembly of 43 diverse human Y chromosomes reveals extensive complexity and variation

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.01.518658

Top 37%

0.528DataRank

Top 37%9 citations

Peter Ebert, Mark Loftus, Feyza Yilmaz, Peter A. Audano, Glennis A. Logsdon +27 more

Strategies to decrease inequalities in cancer therapeutics, care and prevention

Molecular Oncology(2023)10.1002/1878-0261.13575

N/A

0.477DataRank · unranked

23 citations

Joachim von Braun, Julio E. Celis, Michaël Baumann, Anton Berns, Alexander M.M. Eggermont +32 more

SVarp: pangenome-based structural variant discovery

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.18.580171

Top 48%

0.378DataRank

Top 48%8 citations

Jana Ebler, Samarendra Pani, Tobias Rausch, Jan O. Korbel, Tobias Marschall +1 more

A comprehensive catalog of 3D genome organization in diverse human genomes facilitates understanding of the impact of structural variation on chromatin structure

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.15.540856

Top 49%

0.360DataRank

Top 49%5 citations

Marc Jan Bonder, Sabriya A. Syed, HGSVC Functional Analysis Working Group, Michael C. Zody, Mark J. P. Chaisson +7 more

Pan-conserved segment tags identify ultra-conserved sequences across assemblies in the human pangenome

Cell Reports Methods(2023)10.1016/j.crmeth.2023.100543

Top 50%

0.352DataRank

Top 50%6 citations

Stephanie Greer, Dmitri S. Pavlichin, Bo Zhou, Alexander E. Urban, Tsachy Weissman +94 more

De novo assembly of 64 haplotype-resolved human genomes of diverse ancestry and integrated analysis of structural variation

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.16.423102

Top 53%

0.322DataRank

Top 53%5 citations

Peter A. Audano, Qihui Zhu, Bernardo Rodríguez–Martín, David Porubsky, Marc Jan Bonder +58 more

Long-read sequencing of diagnosis and post-therapy medulloblastoma reveals complex rearrangement patterns and epigenetic signatures

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.02.20.480758

N/A

0.312DataRank · unranked

7 citations

René Snajder, Adrien Léger, Milena Simović, Oliver Stegle, Ewan Birney +4 more

Inversion polymorphism in a complete human genome assembly

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.06.511148

N/A

0DataRank · unranked

5 citations

William T. Harvey, Allison N. Rozanski, Jana Ebler, Wolfram Höps, Hufsah Ashraf +7 more

ASHLEYS: automated quality control for single-cell Strand-seq data

Bioinformatics(2021)10.1093/bioinformatics/btab221

N/A

0DataRank · unranked

16 citations

Ashley D. Sanders, Jan O. Korbel, Tobias Marschall, Peter Ebert, C. Gros

Expectations and blind spots for structural variation detection from long-read assemblies and short-read genome sequencing technologies

The American Journal of Human Genetics(2021)10.1016/j.ajhg.2021.03.014

N/A

0DataRank · unranked

137 citations

Ryan L. Collins, Wan‐Ping Lee, Alexandra M. Weber, Yukyung Jun, Qihui Zhu +18 more

Comprehensive genomic profiles of small cell lung cancer

UNC Libraries(2020)10.17615/7168-r920

N/A

0DataRank · unranked

0 citations

Jan O. Korbel, Sung‐Min Chun, Park, Kwon-Sik, Dian Yang, Nadine S. Jahchan +27 more

Long-read sequencing of diagnosis and post-therapy medulloblastoma reveals complex rearrangement patterns and epigenetic signatures

Cell Genomics(2023)10.1016/j.xgen.2023.100281

N/A

0DataRank · unranked

45 citations

René Snajder, Adrien Léger, Milena Simović, Mădălina Giurgiu, Laura Villacorta +8 more

Inversion polymorphism in a complete human genome assembly

Genome biology(2023)10.1186/s13059-023-02919-8

N/A

0DataRank · unranked

33 citations

William T. Harvey, Allison N. Rozanski, Jana Ebler, Wolfram Höps, Hufsah Ashraf +7 more

MosaiCatcher v2: a single-cell structural variations detection and analysis reference framework based on Strand-seq

Bioinformatics(2023)10.1093/bioinformatics/btad633

N/A

0DataRank · unranked

11 citations

Marco Raffaele Cosenza, Jan O. Korbel, Thomas Weber

Gaps and complex structurally variant loci in phased genome assemblies

Genome Research(2023)10.1101/gr.277334.122

N/A

0DataRank · unranked

62 citations

Mitchell R. Vollger, William T. Harvey, Allison N. Rozanski, Peter Ebert, Hickey, Glenn +8 more

Impact and characterization of serial structural variations across humans and great apes

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.09.531868

N/A

0DataRank · unranked

2 citations

Tobias Rausch, Peter Ebert, Jan O. Korbel, Fritz J. Sedlazeck, Wolfram Höps

MosaiCatcher v2: a single-cell structural variations detection and analysis reference framework based on Strand-seq

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.13.548805

N/A

0DataRank · unranked

0 citations

Marco Raffaele Cosenza, Jan O. Korbel, Thomas Weber

Expectations and blind spots for structural variation detection from short-read alignment and long-read assembly

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.03.168831

N/A

0DataRank · unranked

6 citations

Ryan L. Collins, Wan-Ping Lee, Alexandra M. Weber, Yukyung Jun, Qihui Zhu +18 more

Inverted triplications formed by iterative template switches generate structural variant diversity at genomic disorder loci

Cell Genomics(2024)10.1016/j.xgen.2024.100590

N/A

0DataRank · unranked

33 citations

Jesse D. Bengtsson, Haowei Du, Mira Gandhi, Ming Yin Lun, Michele G. Mehaffey +22 more

Impact and characterization of serial structural variations across humans and great apes

Nature Communications(2024)10.1038/s41467-024-52027-9

N/A

0DataRank · unranked

12 citations

Tobias Rausch, Michael Jendrusch, Hufsah Ashraf, Peter A. Audano, Ola Austine +49 more

Pangenome-based genome inference

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.11.378133

N/A

0DataRank · unranked

25 citations

Wayne E. Clarke, Tobias Rausch, Peter A. Audano, Torsten Houwaart, Jan O. Korbel +5 more

Single-cell strand sequencing of a macaque genome reveals multiple nested inversions and breakpoint reuse during primate evolution

Genome Research(2020)10.1101/gr.265322.120

N/A

0DataRank · unranked

25 citations

Ashley D. Sanders, Colin J. Shew, Arvis Sulovari, Yafei Mao, Marta Puig +13 more

An integrative TAD catalog in lymphoblastoid cell lines discloses the functional impact of deletions and insertions in human genomes

Genome Research(2024)10.1101/gr.279419.124

N/A

0DataRank · unranked

2 citations

Marc Jan Bonder, Sabriya A. Syed, Matthew Jensen, HGSVC Functional Analysis Working Group, Mark Gerstein +9 more

Structural variation in 1,019 diverse humans based on long-read sequencing

Nature(2025)10.1038/s41586-025-09290-7

N/A

0DataRank · unranked

56 citations

Samarendra Pani, Jana Ebler, Carsten Hain, Vasiliki Tsapalou, Arda Soylev +27 more

Loss of CFHR5 function reduces the risk for age-related macular degeneration

Nature Communications(2025)10.1038/s41467-025-61193-3

N/A

0DataRank · unranked

6 citations

Stephanie Loomis, Eija Nissilä, Thomas W. Soare, Tobias Rausch, Zhili Zheng +16 more

Structural and transduction patterns of human-specific polymorphic SVA insertions

Mobile DNA(2025)10.1186/s13100-025-00373-w

N/A

0DataRank · unranked

1 citations

Mark Loftus, Emily C. Golba, Haley Abel, Hufsah Ashraf, Peter A. Audano +64 more

Population differences of chromosome 22q11.2 duplication structure predispose differentially to microdeletion and inversion

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.07.04.662981

N/A

0DataRank · unranked

2 citations

DongAhn Yoo, Philip C. Dishuck, Nidhi Koundinya, Erika Souche, William T. Harvey +15 more

Haplotype-aware single-cell multiomics uncovers functional effects of somatic structural variation

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.11.468039

N/A

0DataRank · unranked

4 citations

Karen Grimes, Peter‐Martin Bruch, Tobias Rausch, Patrick Hasenfeld, Radhakrishnan Sabarinathan +13 more

Recurrent inversion toggling and great ape genome evolution

Nature Genetics(2020)10.1038/s41588-020-0646-x

N/A

0DataRank · unranked

89 citations

Ashley D. Sanders, Wolfram Höps, PingHsun Hsieh, Arvis Sulovari, Ruiyang Li +12 more

Pangenome-based genome inference allows efficient and accurate genotyping across a wide spectrum of variant classes

Nature Genetics(2022)10.1038/s41588-022-01043-w

N/A

0DataRank · unranked

290 citations

Peter Ebert, Wayne E. Clarke, Tobias Rausch, Peter A. Audano, Torsten Houwaart +7 more

Functional analysis of structural variants in single cells using Strand-seq

Nature Biotechnology(2022)10.1038/s41587-022-01551-4

N/A

0DataRank · unranked

39 citations

Karen Grimes, Kerstin K. Rauwolf, Peter‐Martin Bruch, Tobias Rausch, Patrick Hasenfeld +16 more

Haplotype-resolved inversion landscape reveals hotspots of mutational recurrence associated with genomic disorders

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.20.472354

N/A

0DataRank · unranked

11 citations

Wolfram Höps, Hufsah Ashraf, PingHsun Hsieh, Bernardo Rodríguez–Martín, Feyza Yilmaz +20 more

Jan O. Korbel

Indexed papers

Top data-sharing exemplar

Papers