Ramesh A. Shivdasani

Also affiliated with Harvard University, Dana-Farber Cancer Institute, Harvard Stem Cell Institute

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

2in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Papers

Driven by 31 papers. Top paper: “Transcription Factors GATA4 and HNF4A Control Distinct Aspects of Intestinal Homeostasis in Conjunction with Transcription Factor CDX2”.

Transcription Factors GATA4 and HNF4A Control Distinct Aspects of Intestinal Homeostasis in Conjunction with Transcription Factor CDX2

Journal of Biological Chemistry(2015)10.1074/jbc.m114.620211

N/A

2.6DataRank · unranked

83 citations

Boaz E. Aronson, Stephen D. Krasinski, Ramesh A. Shivdasani, Michael P. Verzi, Adrianna K. San Roman

SOX2 is an amplified lineage-survival oncogene in lung and esophageal squamous cell carcinomas

Nature Genetics(2009)10.1038/ng.465

N/A

1.0DataRank · unranked

949 citations

Hideo Watanabe, Craig H. Mermel, Soyoung Yu, Sven Perner, So Young Kim +48 more

Graded BMP signaling within intestinal crypt architecture directs self-organization of the Wnt-secreting stem cell niche

Cell stem cell(2023)10.1016/j.stem.2023.03.004

N/A

0.685DataRank · unranked

95 citations

Neil McCarthy, Ermanno Malagola, Guodong Tie, Shariq Madha, Dario Boffelli +4 more

Role of PDGFRA+ cells and a CD55+ PDGFRALo fraction in the gastric mesenchymal niche

Nature Communications(2023)10.1038/s41467-023-43619-y

N/A

0.635DataRank · unranked

16 citations

Guodong Tie, Ermanno Malagola, Davide Seruggia, Shariq Madha, Adrianna Maglieri +9 more

Creb5 establishes the competence for Prg4 expression in articular cartilage

Communications Biology(2021)10.1038/s42003-021-01857-0

N/A

0.624DataRank · unranked

63 citations

Yao Gao, Unmesh Jadhav, Han‐Hwa Hung, Kristina M. Holton, Alan J. Grodzinsky +3 more

Distinct Processes and Transcriptional Targets Underlie CDX2 Requirements in Intestinal Stem Cells and Differentiated Villus Cells

Stem Cell Reports(2015)10.1016/j.stemcr.2015.09.006

N/A

0.571DataRank · unranked

44 citations

Alessio Tovaglieri, David T. Breault, Ramesh A. Shivdasani, Adrianna K. San Roman

Transcription factor-mediated intestinal metaplasia and the role of a shadow enhancer

Genes & Development(2021)10.1101/gad.348983.121

N/A

0.477DataRank · unranked

23 citations

Davide Seruggia, Shariq Madha, Madhurima Saxena, Ankur K. Nagaraja, Zhong Wu +10 more

Cochlear organoids reveal transcriptional programs of postnatal hair cell differentiation from supporting cells

Cell Reports(2023)10.1016/j.celrep.2023.113421

N/A

0.434DataRank · unranked

17 citations

Danielle R. Lenz, Dunia Abdul‐Aziz, Craig Hanna, Mahashweta Basu, Brian R. Herb +9 more

Transcription factor dynamics, oscillation, and functions in human enteroendocrine cell differentiation

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.09.574746

N/A

0.367DataRank · unranked

7 citations

Wei Yong Gu, Shariq Madha, Allen W. Lynch, Paloma Cejas, Ruiyang He +9 more

Intestinal secretory differentiation reflects niche-driven phenotypic and epigenetic plasticity of a common signal-responsive terminal cell

Cell stem cell(2025)10.1016/j.stem.2025.03.005

N/A

0.360DataRank · unranked

10 citations

Guodong Tie, Pratik Singh, Ermanno Malagola, Onur Eskiocak, Ruiyang He +9 more

Cell and chromatin transitions in intestinal stem cell regeneration

Genes & Development(2022)10.1101/gad.349412.122

N/A

0DataRank · unranked

35 citations

Shariq Madha, Andrew B. Leiter, Ramesh A. Shivdasani, Pratik Singh

A MTA2-SATB2 chromatin complex restrains colonic plasticity toward small intestine by retaining HNF4A at colonic chromatin

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.15.520587

N/A

0DataRank · unranked

0 citations

Xiaofeng Huang, Pratik Singh, Ying Lan, Jesús M. Gómez-Salinero, Shahin Rafii +4 more

Smooth muscle contributes to the development and function of a layered intestinal stem cell niche

Developmental Cell(2023)10.1016/j.devcel.2023.02.012

N/A

0DataRank · unranked

46 citations

Guodong Tie, Shariq Madha, Ruiyang He, Judith Kraiczy, Adrianna Maglieri +2 more

Defining the structure, signals, and cellular elements of the gastric mesenchymal niche

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.02.11.527728

N/A

0DataRank · unranked

1 citations

Guodong Tie, Davide Seruggia, Shariq Madha, Adrianna Maglieri, Kun Huang +7 more

Stem cell responses to stretch and strain

Zenodo (CERN European Organization for Nuclear Research)(2023)10.5281/zenodo.7574333

N/A

0DataRank · unranked

0 citations

Haguy Wolfenson, Ramesh A. Shivdasani, Ruby Shalom‐Feuerstein, Swarnabh Bhattacharya

Transcription factor dynamics, oscillation, and functions in human enteroendocrine cell differentiation

Cell stem cell(2024)10.1016/j.stem.2024.04.015

N/A

0DataRank · unranked

19 citations

Wei Yong Gu, Shariq Madha, Allen W. Lynch, Paloma Cejas, Ruiyang He +9 more

A MTA2-SATB2 chromatin complex restrains colonic plasticity toward small intestine by retaining HNF4A at colonic chromatin

Nature Communications(2024)10.1038/s41467-024-47738-y

N/A

0DataRank · unranked

7 citations

Xiaofeng Huang, Pratik Singh, Sanlan Li, Ying Lan, Min Deng +7 more

Crypt density and recruited enhancers underlie intestinal tumour initiation

Nature(2025)10.1038/s41586-024-08573-9

N/A

0DataRank · unranked

18 citations

Harshabad Singh, Guodong Tie, Krithika Badarinath, Shariq Madha, Andrew Mancini +7 more

Remodelling the Colon With Ileal Properties to Treat Short Bowel Syndrome

Gastroenterology(2025)10.1053/j.gastro.2025.03.026

N/A

0DataRank · unranked

4 citations

Shiri Li, Jorge O. Múnera, Ramesh A. Shivdasani, Xiaofeng Huang, Qiao Zhou +1 more

Epigenetic fluidity meets phenotypic malleability in intestinal epithelial cells

Cell chemical biology(2025)10.1016/j.chembiol.2025.02.007

N/A

0DataRank · unranked

0 citations

Ramesh A. Shivdasani, Swarnabh Bhattacharya

IL-22 promotes genesis of small intestinal secretory cells that protect against cholera in mice

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.09.12.675873

N/A

0DataRank · unranked

0 citations

Yūko Hasegawa, Hailong Zhang, Zhu Liang, Guodong Tie, Ramesh A. Shivdasani +2 more

Reply

Gastroenterology(2025)10.1053/j.gastro.2025.09.031

N/A

0DataRank · unranked

0 citations

Ramesh A. Shivdasani, Xiaofeng Huang, Tao Liu

Adaptation of pancreatic cancer cells to nutrient deprivation is reversible and requires glutamine synthetase stabilization by mTORC1

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.16.951681

N/A

0DataRank · unranked

1 citations

Min-Sik Lee, Unmesh Jadhav, Insia Naqvi, Shariq Madha, Ashley Adler +14 more

Epigenetic Signatures and Plasticity of Intestinal and Other Stem Cells

Annual Review of Physiology(2020)10.1146/annurev-physiol-021119-034520

N/A

0DataRank · unranked

15 citations

Ramesh A. Shivdasani, Madhurima Saxena

Creb5 establishes the competence for Prg4 expression in articular cartilage

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.12.248609

N/A

0DataRank · unranked

0 citations

Yao Gao, Unmesh Jadhav, Han‐Hwa Hung, Kristina M. Holton, Alan J. Grodzinsky +3 more

A Summary of the 2016 James W. Freston Conference of the American Gastroenterological Association: Intestinal Metaplasia in the Esophagus and Stomach: Origins, Differences, Similarities and Significance

UNC Libraries(2020)10.17615/88z2-dv23

N/A

0DataRank · unranked

0 citations

James G. Fox, Rhonda F. Souza, Ernst J. Kuipers, Parakrama Chandrasoma, Jason C. Mills +19 more

SATB2 preserves colon stem cell identity and mediates ileum-colon conversion via enhancer remodeling

Cell stem cell(2021)10.1016/j.stem.2021.09.004

N/A

0DataRank · unranked

72 citations

Hua Wang, Xiaofeng Huang, Judith Kraiczy, Pratik Singh, Charles Ng +20 more

Hybrid Stomach-Intestinal Chromatin States Underlie Human Barrett’s Metaplasia

Gastroenterology(2021)10.1053/j.gastro.2021.05.057

N/A

0DataRank · unranked

32 citations

Kyungsik Ha, Jason L. Hornick, Shariq Madha, Paloma Cejas, Kunal Jajoo +5 more

Race to the bottom: Darwinian competition in early intestinal tumorigenesis

Cell stem cell(2021)10.1016/j.stem.2021.07.008

N/A

0DataRank · unranked

3 citations

Ramesh A. Shivdasani

Cochlear organoids reveal epigenetic and transcriptional programs of postnatal hair cell differentiation from supporting cells

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.19.460948

N/A

0DataRank · unranked

3 citations

Danielle R. Lenz, Dunia Abdul‐Aziz, Craig Hanna, Brian R. Herb, Carlo Colantuoni +8 more

Delineation and birth of a layered intestinal stem cell niche

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.28.462142

N/A

0DataRank · unranked

1 citations

Guodong Tie, Shariq Madha, Judith Kraiczy, Adrianna Maglieri, Ramesh A. Shivdasani +1 more