Vladimir Nikolić

Biochemistry, Genetics and Molecular BiologyAgricultural and Biological SciencesEngineeringEnvironmental Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 11 papers. Top paper: “ntJoin: Fast and lightweight assembly-guided scaffolding using minimizer graphs”.

ntJoin: Fast and lightweight assembly-guided scaffolding using minimizer graphs

Bioinformatics(2020)10.1093/bioinformatics/btaa253

N/A

0DataRank · unranked

44 citations

Vladimir Nikolić, Justin Chu, Inanc Birol, René L. Warren, Lauren Coombe

ntJoin: Fast and lightweight assembly-guided scaffolding using minimizer graphs

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.01.13.905240

N/A

0DataRank · unranked

1 citations

Vladimir Nikolić, Justin Chu, Inanc Birol, René L. Warren, Lauren Coombe

LongStitch: high-quality genome assembly correction and scaffolding using long reads

BMC Bioinformatics(2021)10.1186/s12859-021-04451-7

N/A

0DataRank · unranked

82 citations

Janet X. Li, Theodora Lo, Johnathan Wong, Vladimir Nikolić, René L. Warren +2 more

LongStitch: High-quality genome assembly correction and scaffolding using long reads

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.17.448848

N/A

0DataRank · unranked

4 citations

Janet X. Li, Theodora Lo, Johnathan Wong, Vladimir Nikolić, René L. Warren +2 more

ntHash2: recursive spaced seed hashing for nucleotide sequences

Bioinformatics(2022)10.1093/bioinformatics/btac564

N/A

0DataRank · unranked

23 citations

Johnathan Wong, Vladimir Nikolić, Hamid Mohamadi, René L. Warren, Inanc Birol +1 more

btllib: A C++ library with Python interface forefficient genomic sequence processing

The Journal of Open Source Software(2022)10.21105/joss.04720

N/A

0DataRank · unranked

12 citations

Parham Kazemi, Lauren Coombe, Johnathan Wong, Amirhossein Afshinfard, Justin Chu +3 more

Physlr: Next-Generation Physical Maps

DNA(2022)10.3390/dna2020009

N/A

0DataRank · unranked

7 citations

Shaun D. Jackman, Johnathan Wong, Lauren Coombe, Justin Chu, Vladimir Nikolić +5 more

RResolver: efficient short-read repeat resolution within ABySS

BMC Bioinformatics(2022)10.1186/s12859-022-04790-z

N/A

0DataRank · unranked

1 citations

Amirhossein Afshinfard, Justin Chu, Johnathan Wong, Lauren Coombe, Ka Ming Nip +3 more

GoldRush: A de novo long read genome assembler with linear time complexity

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.25.513734

N/A

0DataRank · unranked

1 citations

Lauren Coombe, Vladimir Nikolić, Emily Zhang, Ka Ming Nip, Puneet Sidhu +3 more

ntLink: A Toolkit for De Novo Genome Assembly Scaffolding and Mapping Using Long Reads

Current Protocols(2023)10.1002/cpz1.733

N/A

0DataRank · unranked

57 citations

René L. Warren, Johnathan Wong, Vladimir Nikolić, Inanc Birol, Lauren Coombe

Linear time complexity de novo long read genome assembly with GoldRush

Nature Communications(2023)10.1038/s41467-023-38716-x

N/A

0DataRank · unranked

39 citations

Lauren Coombe, Vladimir Nikolić, Emily Zhang, Ka Ming Nip, Puneet Sidhu +3 more