John E. Pak

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 24 papers. Top paper: “Convergent antibody responses to SARS-CoV-2 in convalescent individuals”.

Convergent antibody responses to SARS-CoV-2 in convalescent individuals

Nature(2020)10.1038/s41586-020-2456-9

N/A

1.1DataRank · unranked

2132 citations

Christian Gaebler, Frauke Muecksch, Julio C. C. Lorenzi, Zijun Wang, Alice Cho +41 more

Genomic and serologic characterization of enterovirus A71 brainstem encephalitis

Neurology Neuroimmunology & Neuroinflammation(2020)10.1212/nxi.0000000000000703

N/A

0DataRank · unranked

31 citations

Ryan Schubert, Dídac Casas‐Alba, Isobel A. Hawes, Prashanth Ramachandran, Akshaya Ramesh +15 more

A single immunization with spike-functionalized ferritin vaccines elicits neutralizing antibody responses against SARS-CoV-2 in mice

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.28.272518

N/A

0DataRank · unranked

31 citations

Kaiming Zhang, Mrinmoy Sanyal, Shaogeng Tang, Payton A. Weidenbacher, Shanshan Li +5 more

Rapid SARS-CoV-2 Detection by Carbon Nanotube-Based Near-Infrared Nanosensors

medRxiv(2020)10.1101/2020.11.02.20223404

N/A

0DataRank · unranked

17 citations

Francis Ledesma, Darwin Yang, Nicole Navarro, Sanghwa Jeong, John E. Pak +6 more

Rapid SARS-CoV-2 Spike Protein Detection by Carbon Nanotube-Based Near-Infrared Nanosensors

Nano Letters(2021)10.1021/acs.nanolett.1c00118

N/A

0DataRank · unranked

232 citations

Francis Ledesma, Darwin Yang, Nicole Navarro, Sanghwa Jeong, John E. Pak +6 more

Divergent and self-reactive immune responses in the CNS of COVID-19 patients with neurological symptoms

Cell Reports Medicine(2021)10.1016/j.xcrm.2021.100288

N/A

0DataRank · unranked

192 citations

Christopher M. Bartley, Ryan D. Chow, Thomas Ngo, Ruoyi Jiang, Colin R. Zamecnik +41 more

A Single Immunization with Spike-Functionalized Ferritin Vaccines Elicits Neutralizing Antibody Responses against SARS-CoV-2 in Mice

ACS Central Science(2021)10.1021/acscentsci.0c01405

N/A

0DataRank · unranked

190 citations

Kaiming Zhang, Mrinmoy Sanyal, Shaogeng Tang, Payton A. Weidenbacher, Shanshan Li +5 more

SARS-CoV-2 antibody magnitude and detectability are driven by disease severity, timing, and assay

Science Advances(2021)10.1126/sciadv.abh3409

N/A

0DataRank · unranked

151 citations

Saki Takahashi, Jill Hakim, J. Daniel Kelly, Leonel Torres, Nikita S. Iyer +41 more

Citywide serosurveillance of the initial SARS-CoV-2 outbreak in San Francisco using electronic health records

Nature Communications(2021)10.1038/s41467-021-23651-6

N/A

0DataRank · unranked

20 citations

Adrienne Epstein, Saki Takahashi, Owen Janson, Jill Hakim, Elias Duarte +22 more

SARS-CoV-2 antibody magnitude and detectability are driven by disease severity, timing, and assay

medRxiv(2021)10.1101/2021.03.03.21251639

N/A

0DataRank · unranked

31 citations

Saki Takahashi, Jill Hakim, J. Daniel Kelly, Leonel Torres, Nikita S. Iyer +40 more

multiSero: open multiplex-ELISA platform for analyzing antibody responses to SARS-CoV-2 infection

medRxiv(2021)10.1101/2021.05.07.21249238

N/A

0DataRank · unranked

14 citations

Eric Waltari, Owen Janson, Syuan-Ming Guo, Jenny Folkesson, Bryant B. Chhun +16 more

The SARS-CoV-2 spike reversibly samples an open-trimer conformation exposing novel epitopes

Nature Structural & Molecular Biology(2022)10.1038/s41594-022-00735-5

N/A

0DataRank · unranked

163 citations

Sophie R. Shoemaker, Helen T. Hobbs, Annalee W. Nguyen, Ching‐Lin Hsieh, Jennifer A. Maynard +4 more

SARS-CoV-2 Spike triggers barrier dysfunction and vascular leak via integrins and TGF-β signaling

Nature Communications(2022)10.1038/s41467-022-34910-5

N/A

0DataRank · unranked

77 citations

Francielle Tramontini Gomes de Sousa, Laurentia V. Tjang, Felix Pahmeier, Chi Zhu, Richard Ruan +24 more

Converting non-neutralizing SARS-CoV-2 antibodies into broad-spectrum inhibitors

Nature Chemical Biology(2022)10.1038/s41589-022-01140-1

N/A

0DataRank · unranked

27 citations

Eric Waltari, Izumi de los Rios Kobara, Benjamin N. Bell, Mary Kate Morris, Ya-Chen Cheng +4 more

A Single-Component Luminescent Biosensor for the SARS-CoV-2 Spike Protein

Journal of the American Chemical Society(2022)10.1021/jacs.2c04192

N/A

0DataRank · unranked

15 citations

Heegwang Roh, Rahul Suryawanshi, G. Renuka Kumar, John E. Pak, Mélanie Ott +2 more

Converting non-neutralizing SARS-CoV-2 antibodies targeting conserved epitopes into broad-spectrum inhibitors through receptor blockade

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.24.477625

N/A

0DataRank · unranked

2 citations

Eric Waltari, Izumi de los Rios Kobara, Benjamin N. Bell, John E. Pak, Peter S. Kim +1 more

Efficient evolution of human antibodies from general protein language models

Nature Biotechnology(2023)10.1038/s41587-023-01763-2

N/A

0DataRank · unranked

453 citations

Varun R. Shanker, Duo Xu, Theodora U. J. Bruun, Payton A. Weidenbacher, Shaogeng Tang +4 more

CAR-T Cell–Mediated B-Cell Depletion in Central Nervous System Autoimmunity

Neurology Neuroimmunology & Neuroinflammation(2023)10.1212/nxi.0000000000200080

N/A

0DataRank · unranked

66 citations

Milos Simic, Sharon A. Sagan, Chanelle Shepherd, Jason Duecker, Raymond A. Sobel +9 more

MultiSero: An Open-Source Multiplex-ELISA Platform for Measuring Antibody Responses to Infection

Pathogens(2023)10.3390/pathogens12050671

N/A

0DataRank · unranked

13 citations

Eric Waltari, Owen Janson, Syuan-Ming Guo, Jenny Folkesson, Bryant B. Chhun +22 more

High-yield production of recombinant human myelin oligodendrocyte glycoprotein in SHuffle bacteria without a refolding step

Journal of Immunological Methods(2024)10.1016/j.jim.2024.113764

N/A

0DataRank · unranked

2 citations

Sasha Gupta, Sharon A. Sagan, Carson E. Moseley, Scott S. Zamvil, John E. Pak +1 more

Utilizing Machine Learning to Improve Neutralization Potency of an HIV-1 Antibody Targeting the gp41 N-Heptad Repeat

ACS Chemical Biology(2025)10.1021/acschembio.5c00035

N/A

0DataRank · unranked

1 citations

Shaogeng Tang, Soohyun Kim, Varun R. Shanker, Brian Hie, Theodora U. J. Bruun +5 more

A Trypanosoma cruzi Trans-Sialidase Peptide Demonstrates High Serological Prevalence Among Infected Populations Across Endemic Regions of Latin America

medRxiv(2025)10.1101/2025.01.22.25320967

N/A

0DataRank · unranked

2 citations

Ryan Marczak, Jayant V. Rajan, Nash L Bulaong, John E. Pak, Wesley Wu +19 more

Therapeutic Potential of Cyclodextrins Targeting Dengue Virus and SARS-CoV-2 Infection and Pathogenesis

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.08.03.668365

N/A

0DataRank · unranked

1 citations

Erika Vanessa Jiménez-Posada, Francielle Tramontini Gomes de Sousa, Scott B. Biering, Trishna S. Patel, Samhita Bhat +7 more

CCDC32 stabilizes clathrin-coated pits and drives their invagination

eLife(2025)10.7554/elife.107039

N/A

0DataRank · unranked

0 citations

Changsong Yang, Zheng Huang, Peiliu Xu, Yueping Li, Lu Han +7 more