Pieter C. Dorrestein

Also affiliated with University of Alabama at Birmingham, University of California San Diego, Universidad Católica Santo Domingo, University of Montana

Biochemistry, Genetics and Molecular BiologyMedicineChemistry

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

10.3Author DataRank

Indexed papers

9in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 9 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

The underappreciated diversity of bile acid modifications

Cell(2024)10.1016/j.cell.2024.02.019

Top 7%

3.2DataRank

Top 7%192 citations

Helena Mannochio-Russo, Joshua V. Schweer, Yasin El Abiead, Wout Bittremieux, Shipei Xing +23 more

Papers

Driven by 173 papers — median percentile 67. Top paper: “Feature-based molecular networking in the GNPS analysis environment”.

Feature-based molecular networking in the GNPS analysis environment

Nature Methods(2020)10.1038/s41592-020-0933-6

N/A

10.9DataRank · unranked

1581 citations

Daniel Petras, Robin Schmid, Kai Dührkop, Johannes Rainer, Abinesh Sarvepalli +57 more

Systematic classification of unknown metabolites using high-resolution fragmentation mass spectra

Nature Biotechnology(2020)10.1038/s41587-020-0740-8

N/A

5.0DataRank · unranked

840 citations

Louis‐Félix Nothias, Markus Fleischauer, Raphael Reher, Marcus Ludwig, Martin Hoffmann +6 more

The underappreciated diversity of bile acid modifications

Cell(2024)10.1016/j.cell.2024.02.019

Top 7%

3.2DataRank

Top 7%192 citations

Helena Mannochio-Russo, Joshua V. Schweer, Yasin El Abiead, Wout Bittremieux, Shipei Xing +23 more

Standardized multi-omics of Earth’s microbiomes reveals microbial and metabolite diversity

Nature Microbiology(2022)10.1038/s41564-022-01266-x

Top 7%

3.0DataRank

Top 7%191 citations

Louis‐Félix Nothias, Luke Thompson, Jon G. Sanders, Rodolfo A. Salido, Sneha Couvillion +89 more

Open access repository-scale propagated nearest neighbor suspect spectral library for untargeted metabolomics

Nature Communications(2023)10.1038/s41467-023-44035-y

Top 15%

1.4DataRank

Top 15%82 citations

Nicole E. Avalon, Sydney P. Thomas, Sarvar A. Kakhkhorov, Alexander A. Aksenov, Paulo Wender Portal Gomes +27 more

Qiita: rapid, web-enabled microbiome meta-analysis

Nature Methods(2018)10.1038/s41592-018-0141-9

N/A

0.982DataRank · unranked

697 citations

Jose A. Navas-Molina, Tomasz Kosciolek, Daniel McDonald, Yoshiki Vázquez-Baeza, Gail Ackermann +24 more

Reproducible molecular networking of untargeted mass spectrometry data using GNPS

Nature Protocols(2020)10.1038/s41596-020-0317-5

N/A

0.977DataRank · unranked

673 citations

Emily C. Gentry, Kerry L. McPhail, Louis‐Félix Nothias, Mélissa Nothias-Esposito, Amina Bouslimani +37 more

Enabling pan-repository reanalysis for big data science of public metabolomics data

Nature Communications(2025)10.1038/s41467-025-60067-y

Top 33%

0.600DataRank

Top 33%33 citations

Michael Strobel, Thomas Payne, Eoin Fahy, Claire O’Donovan, Shankar Subramamiam +17 more

Open Access Repository-Scale Propagated Nearest Neighbor Suspect Spectral Library for Untargeted Metabolomics

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.15.490691

Top 33%

0.597DataRank

Top 33%28 citations

Nicole E. Avalon, Sydney P. Thomas, Sarvar A. Kakhkhorov, Alexander A. Aksenov, Paulo Wender Portal Gomes +27 more

The microbiome diversifies long- to short-chain fatty acid-derived N-acyl lipids

Cell(2025)10.1016/j.cell.2025.05.015

Top 33%

0.587DataRank

Top 33%30 citations

Vincent Charron-Lamoureux, Martijn van Faassen, Santosh Lamichhane, Wilhan Donizete Gonçalves Nunes, Victoria Deleray +43 more

Identifying the effect of vancomycin on health care–associated methicillin-resistant Staphylococcus aureus strains using bacteriological and physiological media

GigaScience(2021)10.1093/gigascience/giaa156

N/A

0.548DataRank · unranked

15 citations

Saugat Poudel, Hannah Tsunemoto, Michael J. Meehan, Richard Szubin, Connor A. Olson +14 more

Enabling pan-repository reanalysis for big data science of public metabolomics data

ChemRxiv(2024)10.26434/chemrxiv-2024-jt46s

Top 46%

0.397DataRank

Top 46%10 citations

Michael Strobel, Thomas Payne, Eoin Fahy, Claire O’Donovan, Shankar Subramamiam +12 more

The undiscovered natural product potential of Actinomycetes

The Journal of Antibiotics(2025)10.1038/s41429-025-00876-x

Top 56%

0.292DataRank

Top 56%6 citations

Andrés Cumsille, Sarolt Magyari, María Taboada-Alquerque, Bahar Behsaz, Tiago Leão +13 more

Targeted Microbial Shifts and Metabolite Profiles Were Associated with Clinical Response to an Anti-Inflammatory Diet in Osteoarthritis

Nutrients(2025)10.3390/nu17172729

N/A

0.273DataRank · unranked

5 citations

Kevin Bu, Roxana Coras, Martha Cedeño, Simone Zuffa, Jessica Murillo‐Saich +16 more

A resource to empirically establish drug exposure records directly from untargeted metabolomics data

Nature Communications(2025)10.1038/s41467-025-65993-5

Top 65%

0.208DataRank

Top 65%3 citations

Kine Eide Kvitne, Corinna Brungs, Siddharth Mohan, Vincent Charron‐Lamoureux, Wout Bittremieux +54 more

MS/MS networking guided analysis of molecule and gene cluster families

UNC Libraries(2020)10.17615/bd99-qk88

N/A

0DataRank · unranked

16 citations

B. S. Moore, Pieter C. Dorrestein, C.-H. Wu, Atencio, L., B. M. Duggan +23 more

Multiomics Analysis Provides Insight into the Laboratory Evolution of Escherichia coli toward the Metabolic Usage of Fluorinated Indoles

ACS Central Science(2020)10.1021/acscentsci.0c00679

N/A

0DataRank · unranked

47 citations

Ludwig Sinn, Daniel Petras, Christian J. Schipp, Vladimir Kubyshkin, A. Berger +5 more

Enhanced Characterization of Drug Metabolism and the Influence of the Intestinal Microbiome: A Pharmacokinetic, Microbiome, and Untargeted Metabolomics Study

Clinical and Translational Science(2020)10.1111/cts.12785

N/A

0DataRank · unranked

40 citations

Alison Vrbanac, Jeremiah D. Momper, D. Joseph, Maher Alhaja, Marlon Liyanage +4 more

Thiopeptide antibiotics stimulate biofilm formation in Bacillus subtilis

UNC Libraries(2020)10.17615/4r9h-ea25

N/A

0DataRank · unranked

7 citations

Jeramie D. Watrous, Elizabeth A. Shank, Albert A. Bowers, Pieter C. Dorrestein, Rachel M. Bleich

NPClassifier: A Deep Neural Network-Based Structural Classification Tool for Natural Products

ChemRxiv(2020)10.26434/chemrxiv.12885494.v1

N/A

0DataRank · unranked

38 citations

Mingxun Wang, Christopher A. Leber, Louis‐Félix Nothias, Raphael Reher, Kyo Bin Kang +5 more

NPClassifier: A Deep Neural Network-Based Structural Classification Tool for Natural Products

ChemRxiv(2020)10.26434/chemrxiv.12885494

N/A

0DataRank · unranked

28 citations

Mingxun Wang, Christopher A. Leber, Louis‐Félix Nothias, Raphael Reher, Kyo Bin Kang +5 more

Ion Identity Molecular Networking in the GNPS Environment

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.11.088948

N/A

0DataRank · unranked

23 citations

Daniel Petras, Louis‐Félix Nothias, Mingxun Wang, Allegra T. Aron, Annika Jagels +40 more

Chemically-informed Analyses of Metabolomics Mass Spectrometry Data with Qemistree

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.04.077636

N/A

0DataRank · unranked

17 citations

Yoshiki Vázquez‐Baeza, Julia M. Gauglitz, Mingxun Wang, Kai Dührkop, Mélissa Nothias-Esposito +14 more

Reference data based insights expand understanding of human metabolomes

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.08.194159

N/A

0DataRank · unranked

10 citations

Wout Bittremieux, Candace L. Williams, Kelly C. Weldon, Morgan Panitchpakdi, Francesca Di Ottavio +59 more

Siderophore-mediated zinc acquisition enhances enterobacterial colonization of the inflamed gut

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.20.212498

N/A

0DataRank · unranked

4 citations

Judith Behnsen, Allegra T. Aron, Subramanian Vivekanandan, Janet Z. Liu, Romana R. Gerner +19 more

Profiling the effect of nafcillin on HA-MRSA D592 using bacteriological and physiological media

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.30.070904

N/A

0DataRank · unranked

3 citations

Saugat Poudel, Hannah Tsunemoto, Richard Szubin, Michael J. Meehan, Connor A. Olson +15 more

Monomeric and Dimeric Bromophenols from the Red Alga Ceramium Sp. with Antioxidant and Anti-Inflammatory Activities

ChemRxiv(2020)10.26434/chemrxiv.12760352

N/A

0DataRank · unranked

3 citations

Evgenia Glukhov, Haobin Yu, Lena Gerwick, Pieter C. Dorrestein, William H. Gerwick +1 more

Characterizing the response of Acinetobacter baumannii ATCC 17978 to azithromycin in multiple in vitro growth conditions

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.19.079962

N/A

0DataRank · unranked

2 citations

Yara Seif, Hannah Tsunemoto, Saugat Poudel, Michael J. Meehan, Richard Szubin +15 more

Monomeric and Dimeric Bromophenols from the Red Alga Ceramium Sp. with Antioxidant and Anti-Inflammatory Activities

ChemRxiv(2020)10.26434/chemrxiv.12760352.v1

N/A

0DataRank · unranked

1 citations

Evgenia Glukhov, Haobin Yu, Lena Gerwick, Pieter C. Dorrestein, William H. Gerwick +1 more

Feature-Based Molecular Networking Analysis of the Metabolites Produced by in vitro Solid-State Fermentation Reveals Pathways for the Bioconversion of Epigallocatechin Gallate

ChemRxiv(2020)10.26434/chemrxiv.12124206.v2

N/A

0DataRank · unranked

1 citations

Ya-Shuai Kong, Ru-Ze Li, Hong Zhang, Lulu Liu, Tingting An +20 more

Identifying the effect of vancomycin on HA-MRSA strains using bacteriological and physiological media

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.06.079640

N/A

0DataRank · unranked

0 citations

Saugat Poudel, Hannah Tsunemoto, Michael J. Meehan, Richard Szubin, Connor A. Olson +14 more

The ant fungus garden acts as an external digestive system

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.18.389361

N/A

0DataRank · unranked

0 citations

Sara P. Puckett, Kathleen E. Kyle, Daniel Petras, Ricardo Silva, Louis‐Félix Nothias +8 more

NPClassifier: A Deep Neural Network-Based Structural Classification Tool for Natural Products

Journal of Natural Products(2021)10.1021/acs.jnatprod.1c00399

N/A

0DataRank · unranked

509 citations

Mingxun Wang, Christopher A. Leber, Louis‐Félix Nothias, Raphael Reher, Kyo Bin Kang +5 more

Ion identity molecular networking for mass spectrometry-based metabolomics in the GNPS environment

Nature Communications(2021)10.1038/s41467-021-23953-9

N/A

0DataRank · unranked

325 citations

Daniel Petras, Louis‐Félix Nothias, Mingxun Wang, Allegra T. Aron, Annika Jagels +40 more

High-confidence structural annotation of metabolites absent from spectral libraries

Nature Biotechnology(2021)10.1038/s41587-021-01045-9

N/A

0DataRank · unranked

301 citations

Louis‐Félix Nothias, Marcus Ludwig, Markus Fleischauer, Emily C. Gentry, Michael Witting +4 more

Multi-omics of human plasma reveals molecular features of dysregulated inflammation and accelerated aging in schizophrenia

Molecular Psychiatry(2021)10.1038/s41380-021-01339-z

N/A

0DataRank · unranked

93 citations

Robert H. Mills, Toer Stevens, Leigh‐Ana Rossitto, Michael J. Meehan, Pieter C. Dorrestein +6 more

GNPS Dashboard: collaborative exploration of mass spectrometry data in the web browser

Nature Methods(2021)10.1038/s41592-021-01339-5

N/A

0DataRank · unranked

95 citations

Vanessa V. Phelan, Deepa Acharya, Andrew E. Allen, Allegra T. Aron, Nuno Bandeira +30 more

Siderophore-mediated zinc acquisition enhances enterobacterial colonization of the inflamed gut

Nature Communications(2021)10.1038/s41467-021-27297-2

N/A

0DataRank · unranked

95 citations

Hui Zhi, Allegra T. Aron, Subramanian Vivekanandan, William Santus, Michael H. Lee +21 more

Integrating genomics and metabolomics for scalable non-ribosomal peptide discovery

Nature Communications(2021)10.1038/s41467-021-23502-4

N/A

0DataRank · unranked

76 citations

Edna Bode, Alexey Gurevich, Yan‐Ni Shi, Florian Grundmann, Deepa Acharya +11 more

Advancements in capturing and mining mass spectrometry data are transforming natural products research

Natural Product Reports(2021)10.1039/d1np00040c

N/A

0DataRank · unranked

72 citations

Justin J. J. van der Hooft, Pieter C. Dorrestein, Alan K. Jarmusch, Scott A. Jarmusch

Tiny Earth: A Big Idea for STEM Education and Antibiotic Discovery

mBio(2021)10.1128/mbio.03432-20

N/A

0DataRank · unranked

65 citations

Marc G. Chevrette, Deepa Acharya, Gabriel L. Lozano, Manuel F. Garavito, Jen Heinritz +24 more

Intermittent Hypoxia and Hypercapnia Alter Diurnal Rhythms of Luminal Gut Microbiome and Metabolome

mSystems(2021)10.1128/msystems.00116-21

N/A

0DataRank · unranked

53 citations

Amulya Lingaraju, Cameron Martino, Baylee J. Russell, Anupriya Tripathi, Orit Poulsen +10 more

Chemical interplay and complementary adaptative strategies toggle bacterial antagonism and co-existence

Cell Reports(2021)10.1016/j.celrep.2021.109449

N/A

0DataRank · unranked

51 citations

David Vela‐Corcía, Daniel Petras, Luis Díaz‐Martínez, Alicia Isabel Pérez‐Lorente, Sara Sopeña‐Torres +6 more

Mammalian gut metabolomes mirror microbiome composition and host phylogeny

The ISME Journal(2021)10.1038/s41396-021-01152-0

N/A

0DataRank · unranked

40 citations

Maraike Probst, Stav Eyal, Alexander A. Aksenov, Goor Sasson, Igal Horovitz +4 more

A Multi-Omics Characterization of the Natural Product Potential of Tropical Filamentous Marine Cyanobacteria

Marine Drugs(2021)10.3390/md19010020

N/A

0DataRank · unranked

39 citations

Mingxun Wang, Nathan A. Moss, Ricardo Silva, Jon G. Sanders, Sergey Nurk +16 more

Non-targeted tandem mass spectrometry enables the visualization of organic matter chemotype shifts in coastal seawater

Chemosphere(2021)10.1016/j.chemosphere.2020.129450

N/A

0DataRank · unranked

65 citations

Jeremiah J. Minich, Lucía Cancelada, Ralph R. Torres, Emily Kunselman, Mingxun Wang +6 more

Chemical Proportionality within Molecular Networks

Analytical Chemistry(2021)10.1021/acs.analchem.1c01520

N/A

0DataRank · unranked

36 citations

Andrés Mauricio Caraballo‐Rodríguez, Alan K. Jarmusch, Carlos Molina‐Santiago, Julia M. Gauglitz, Emily C. Gentry +6 more

Influence of Intermittent Hypoxia/Hypercapnia on Atherosclerosis, Gut Microbiome, and Metabolome

Frontiers in Physiology(2021)10.3389/fphys.2021.663950

N/A

0DataRank · unranked

34 citations

Celeste Allaband, Dan Zhou, Orit Poulsen, Cameron Martino, Lingjing Jiang +7 more

Spatial metabolomics identifies localized chemical changes in heart tissue during chronic cardiac Chagas Disease

PLoS neglected tropical diseases(2021)10.1371/journal.pntd.0009819

N/A

0DataRank · unranked

34 citations

Gautham Gautham, Jair L. Siqueira-Neto, James H. McKerrow, Pieter C. Dorrestein, Laura‐Isobel McCall +1 more

Large‐scale tandem mass spectrum clustering using fast nearest neighbor searching

Rapid Communications in Mass Spectrometry(2021)10.1002/rcm.9153

N/A

0DataRank · unranked

31 citations

Kris Laukens, William Stafford Noble, Pieter C. Dorrestein, Wout Bittremieux

Specialized Metabolites from Ribosome Engineered Strains of Streptomyces clavuligerus

Metabolites(2021)10.3390/metabo11040239

N/A

0DataRank · unranked

23 citations

Louis‐Félix Nothias, Santosh K. Srivastava, Pieter C. Dorrestein, Kapil Tahlan, Arshad Ali Shaikh

Nerpa: A Tool for Discovering Biosynthetic Gene Clusters of Bacterial Nonribosomal Peptides

Metabolites(2021)10.3390/metabo11100693

N/A

0DataRank · unranked

20 citations

Azat Tagirdzhanov, Andrés Mauricio Caraballo‐Rodríguez, Louis‐Félix Nothias, Pieter C. Dorrestein, Anton Korobeynikov +3 more

The Fecal Microbiome and Metabolome of Pitt Hopkins Syndrome, a Severe Autism Spectrum Disorder

mSystems(2021)10.1128/msystems.01006-21

N/A

0DataRank · unranked

14 citations

Daniel McDonald, Tanya T. Nguyen, James B. Adams, Rosa Krajmalnik-Brown, Emmanuel Elijah +3 more

Dysregulation of Glycerophosphocholines in the Cutaneous Lesion Caused by Leishmania major in Experimental Murine Models

Pathogens(2021)10.3390/pathogens10050593

N/A

0DataRank · unranked

10 citations

Diane Thomas, Sharon Lostracco-Johnson, Jair L. Siqueira-Neto, James H. McKerrow, Pieter C. Dorrestein +2 more

Physicochemical properties determining drug detection in skin

Clinical and Translational Science(2021)10.1111/cts.13198

N/A

0DataRank · unranked

9 citations

Rohit S. Advani, Alan K. Jarmusch, Shaden Aguirre, Aileen Lu, Pieter C. Dorrestein +2 more

Chemical Gradients of Plant Substrates in an Atta texana Fungus Garden

mSystems(2021)10.1128/msystems.00601-21

N/A

0DataRank · unranked

6 citations

Sara P. Puckett, Kathleen E. Kyle, Daniel Petras, Ricardo Silva, Louis‐Félix Nothias +8 more

Mass Spectrometry–Based Detection of Beta Lactam Hydrolysis Enables Rapid Detection of Beta Lactamase Mediated Antibiotic Resistance

Laboratory Medicine(2021)10.1093/labmed/lmab068

N/A

0DataRank · unranked

2 citations

Kyle Lund, Andrés Mauricio Caraballo‐Rodríguez, Sharon L. Reed, Pieter C. Dorrestein, Robert L. Fitzgerald +2 more

Assigning confidence to structural annotations from mass spectra with COSMIC

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.18.435634

N/A

0DataRank · unranked

68 citations

Louis‐Félix Nothias, Marcus Ludwig, Markus Fleischauer, Emily C. Gentry, Michael Witting +4 more

A Synthesis-Based Reverse Metabolomics Approach for the Discovery of Chemical Structures from Humans and Animals.

Research Square(2021)10.21203/rs.3.rs-820302/v1

N/A

0DataRank · unranked

21 citations

Emily C. Gentry, Stephanie L. Collins, Morgan Panitchpakdi, Pedro Belda‐Ferre, Allison K. Stewart +14 more

GNPS Dashboard: Collaborative Analysis of Mass Spectrometry Data in the Web Browser

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.05.438475

N/A

0DataRank · unranked

13 citations

Vanessa V. Phelan, Deepa Acharya, Andrew E. Allen, Allegra T. Aron, Nuno Bandeira +30 more

Chemical interplay and complementary adaptative strategies toggle bacterial antagonism and co-existence

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.11.426172

N/A

0DataRank · unranked

8 citations

David Vela‐Corcía, Daniel Petras, Luis Díaz‐Martínez, Alicia Isabel Pérez‐Lorente, Sara Sopeña‐Torres +6 more

Multi-omics profiling of Earth’s biomes reveals patterns of diversity and co-occurrence in microbial and metabolite composition across environments

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.04.446988

N/A

0DataRank · unranked

8 citations

Louis‐Félix Nothias, Luke Thompson, Jon G. Sanders, Rodolfo A. Salido, Sneha Couvillion +45 more

Native Metabolomics Identifies the Rivulariapeptolide Family of Protease Inhibitors

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.03.458897

N/A

0DataRank · unranked

8 citations

Allegra T. Aron, Pavla Fajtová, Paolo Stincone, Chenxi Liu, Ido Ben‐Shalom +12 more

Peripheral Neuronal Activation Shapes the Microbiome and Alters Gut Physiology

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.12.439539

N/A

0DataRank · unranked

6 citations

Bryan B. Yoo, Peter Thuy-Boun, Victor Cantu, Kelly C. Weldon, Collin Challis +14 more

Large-scale tandem mass spectrum clustering using fast nearest neighbor searching

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.05.429957

N/A

0DataRank · unranked

5 citations

Kris Laukens, William Stafford Noble, Pieter C. Dorrestein, Wout Bittremieux

NPOmix: a machine learning classifier to connect mass spectrometry fragmentation data to biosynthetic gene clusters

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.05.463235

N/A

0DataRank · unranked

5 citations

Mingxun Wang, Ricardo Silva, Alexey Gurevich, Anelize Bauermeister, Paulo Wender Portal Gomes +13 more

Non-Invasive Skin Sampling Detects Systemically Administered Drugs in Humans

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.22.469638

N/A

0DataRank · unranked

4 citations

Kelly C. Weldon, Alan K. Jarmusch, Emily C. Gentry, Arianna Choi, Yadira Sepulveda +6 more

Mutualistic interactions between B. subtilis and seeds dictate plant development

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.07.447311

N/A

0DataRank · unranked

1 citations

Carlos Molina‐Santiago, Andrés Mauricio Caraballo‐Rodríguez, Daniel Petras, Luis Díaz‐Martínez, Alejandro Pérez‐García +4 more

Physicochemical and Pharmacokinetic Properties Determining Drug Detection in Skin

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.08.17.456720

N/A

0DataRank · unranked

1 citations

Rohit S. Advani, Alan K. Jarmusch, Shaden Aguirre, Aileen Lu, Pieter C. Dorrestein +2 more

The molecular impact of life in an indoor environment

ChemRxiv(2021)10.26434/chemrxiv-2021-nk5cr

N/A

0DataRank · unranked

1 citations

Rodolfo A. Salido, Alexey V. Melnik, Caitriona Brennan, Asker Brejnrod, Andrés Mauricio Caraballo‐Rodríguez +7 more

Chemical Proportionality within Molecular Networks

ChemRxiv(2021)10.26434/chemrxiv.14396105.v1

N/A

0DataRank · unranked

1 citations

Andrés Mauricio Caraballo‐Rodríguez, Alan K. Jarmusch, Carlos Molina‐Santiago, Julia M. Gauglitz, Emily C. Gentry +6 more

Salivary bacterial signatures in depression-obesity comorbidity are associated with neurotransmitters and neuroactive dipeptides

medRxiv(2021)10.1101/2021.08.10.21255754

N/A

0DataRank · unranked

1 citations

Jordan N. Kohn, Emily A. Troyer, Kelly C. Weldon, Shi Huang, Anupriya Tripathi +5 more

Reference data-set driven metabolomics

Research Square(2021)10.21203/rs.3.rs-654519/v1

N/A

0DataRank · unranked

0 citations

Kiana West, Wout Bittremieux, Candace L. Williams, Kelly C. Weldon, Morgan Panitchpakdi +69 more

Salivary bacterial signatures in depression-obesity comorbidity are associated with neurotransmitters and neuroactive dipeptides

Research Square(2021)10.21203/rs.3.rs-829379/v1

N/A

0DataRank · unranked

0 citations

Gajender Aleti, Jordan N. Kohn, Emily A. Troyer, Kelly C. Weldon, Shi Huang +5 more

foodMASST: A Mass Spectrometry Search Tool for Foods and Beverages.

Research Square(2021)10.21203/rs.3.rs-778710/v1

N/A

0DataRank · unranked

0 citations

Kiana West, Robin Schmid, Julia M. Gauglitz, Mingxun Wang, Pieter C. Dorrestein

Chemical Proportionality within Molecular Networks

ChemRxiv(2021)10.26434/chemrxiv.14396105

N/A

0DataRank · unranked

0 citations

Andrés Mauricio Caraballo‐Rodríguez, Alan K. Jarmusch, Carlos Molina‐Santiago, Julia M. Gauglitz, Emily C. Gentry +6 more

The critical role that spectral libraries play in capturing the metabolomics community knowledge

Metabolomics(2022)10.1007/s11306-022-01947-y

N/A

0DataRank · unranked

136 citations

Mingxun Wang, Pieter C. Dorrestein, Wout Bittremieux

Comparison of Cosine, Modified Cosine, and Neutral Loss Based Spectrum Alignment For Discovery of Structurally Related Molecules

Journal of the American Society for Mass Spectrometry(2022)10.1021/jasms.2c00153

N/A

0DataRank · unranked

83 citations

Robin Schmid, Florian Huber, Justin J. J. van der Hooft, Mingxun Wang, Pieter C. Dorrestein +1 more

Enhancing untargeted metabolomics using metadata-based source annotation

Nature Biotechnology(2022)10.1038/s41587-022-01368-1

N/A

0DataRank · unranked

79 citations

Kiana West, Wout Bittremieux, Candace L. Williams, Kelly C. Weldon, Morgan Panitchpakdi +68 more

foodMASST a mass spectrometry search tool for foods and beverages

npj Science of Food(2022)10.1038/s41538-022-00137-3

N/A

0DataRank · unranked

49 citations

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Peng Yao, Kerry L. McPhail, Lixin Zhang, Kathleen Dorrestein, Wenyuan Shi +95 more

ReDU: a framework to find and reanalyze public mass spectrometry data

Nature Methods(2020)10.1038/s41592-020-0916-7

N/A

0DataRank · unranked

141 citations

Mingxun Wang, Christine M. Aceves, Rohit S. Advani, Shaden Aguirre, Alexander A. Aksenov +39 more

Global chemical effects of the microbiome include new bile-acid conjugations

Nature(2020)10.1038/s41586-020-2047-9

N/A

0DataRank · unranked

593 citations

Alexey V. Melnik, Alison Vrbanac, Ting Fu, Kathryn A. Patras, Mitchell P. Christy +53 more

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Nature Biotechnology(2020)10.1038/s41587-019-0375-9

N/A

0DataRank · unranked

298 citations

Alan K. Jarmusch, Fernando Vargas, Alexander A. Aksenov, Julia M. Gauglitz, Kelly C. Weldon +31 more

Linking genomics and metabolomics to chart specialized metabolic diversity

Chemical Society Reviews(2020)10.1039/d0cs00162g

N/A

0DataRank · unranked

223 citations

Hosein Mohimani, Anelize Bauermeister, Pieter C. Dorrestein, Katherine Duncan, Marnix H. Medema +1 more

Mortality Risk Profiling of Staphylococcus aureus Bacteremia by Multi-omic Serum Analysis Reveals Early Predictive and Pathogenic Signatures

Cell(2020)10.1016/j.cell.2020.07.040

N/A

0DataRank · unranked

123 citations

Robert H. Mills, Joshua Olson, J.R. Caldera, Gregory D. Sepich‐Poore, Marvic Carrillo-Terrazas +10 more

Chemically informed analyses of metabolomics mass spectrometry data with Qemistree

Nature Chemical Biology(2020)10.1038/s41589-020-00677-3

N/A

0DataRank · unranked

113 citations

Yoshiki Vázquez‐Baeza, Julia M. Gauglitz, Mingxun Wang, Kai Dührkop, Mélissa Nothias-Esposito +15 more

Repeated sleep disruption in mice leads to persistent shifts in the fecal microbiome and metabolome

PLoS ONE(2020)10.1371/journal.pone.0229001

N/A

0DataRank · unranked

98 citations

Fernando Vargas, Antonio González, Shannon He, Peng Jiang, Pieter C. Dorrestein +7 more

High-Resolution Longitudinal Dynamics of the Cystic Fibrosis Sputum Microbiome and Metabolome through Antibiotic Therapy

mSystems(2020)10.1128/msystems.00292-20

N/A

0DataRank · unranked

87 citations

Karla Vasco, Yoshiki Vázquez‐Baeza, Lingjing Jiang, James T. Morton, Danxun Li +10 more

Fungal–bacterial interaction selects for quorum sensing mutants with increased production of natural antifungal compounds

Communications Biology(2020)10.1038/s42003-020-01342-0

N/A

0DataRank · unranked

42 citations

Daniel Petras, Romina A. Tobares, Alexander A. Aksenov, Mingxun Wang, Florencia Juncosa +5 more

Metabolome-Informed Microbiome Analysis Refines Metadata Classifications and Reveals Unexpected Medication Transfer in Captive Cheetahs

mSystems(2020)10.1128/msystems.00635-19

N/A

0DataRank · unranked

15 citations

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mSystems(2020)10.1128/msystems.00340-20

N/A

0DataRank · unranked

14 citations

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