Túlio de Oliveira

MedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

5.5Author DataRank

Indexed papers

5in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 5 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Early transmission of SARS-CoV-2 in South Africa: An epidemiological and phylogenetic report

International Journal of Infectious Diseases(2020)10.1016/j.ijid.2020.11.128

Top 5%

4.8DataRank

Top 5%100 citations

Sureshnee Pillay, Eduan Wilkinson, Houriiyah Tegally, Ilya Sinayskiy, Maria Schuld +14 more

Papers

Driven by 84 papers — median percentile 22. Top paper: “Emergence of SARS-CoV-2 Omicron lineages BA.4 and BA.5 in South Africa”.

Emergence of SARS-CoV-2 Omicron lineages BA.4 and BA.5 in South Africa

Nature Medicine(2022)10.1038/s41591-022-01911-2

N/A

14.5DataRank · unranked

697 citations

Monika Moir, Josie Everatt, Marta Giovanetti, Cathrine Scheepers, Eduan Wilkinson +90 more

Efficacy of the ChAdOx1 nCoV-19 Covid-19 Vaccine against the B.1.351 Variant

New England Journal of Medicine(2021)10.1056/nejmoa2102214

N/A

13.3DataRank · unranked

1321 citations

Vicky L. Baillie, Clare Cutland, Merryn Voysey, Anthonet Koen, Lee Fairlie +46 more

Two doses of SARS-CoV-2 vaccination induce robust immune responses to emerging SARS-CoV-2 variants of concern

Nature Communications(2021)10.1038/s41467-021-25167-5

N/A

5.7DataRank · unranked

191 citations

Adam Harding, Javier Gilbert‐Jaramillo, Michael L. Knight, Stéphanie Longet, Anthony Brown +92 more

Early transmission of SARS-CoV-2 in South Africa: An epidemiological and phylogenetic report

International Journal of Infectious Diseases(2020)10.1016/j.ijid.2020.11.128

Top 5%

4.8DataRank

Top 5%100 citations

Sureshnee Pillay, Eduan Wilkinson, Houriiyah Tegally, Ilya Sinayskiy, Maria Schuld +14 more

Reduced efficacy of HIV-1 integrase inhibitors in patients with drug resistance mutations in reverse transcriptase

Nature Communications(2020)10.1038/s41467-020-19801-x

N/A

4.0DataRank · unranked

83 citations

Michelle Moorhouse, Bryony Simmons, Túlio de Oliveira, Richard Lessells, Jennifer Giandhari +8 more

Genomic assessment of invasion dynamics of SARS-CoV-2 Omicron BA.1

Science(2023)10.1126/science.adg6605

N/A

1.3DataRank · unranked

70 citations

John T. McCrone, Ben Lambert, Sumali Bajaj, Rhys Inward, Paolo Bosetti +35 more

T cell responses to SARS-CoV-2 spike cross-recognize Omicron

Nature(2022)10.1038/s41586-022-04460-3

N/A

0.966DataRank · unranked

625 citations

Marius B. Tincho, Amkele Ngomti, Richard Baguma, Ntombi Benede, Akiko Suzuki +42 more

SARS-CoV-2 Variants of Interest and Concern naming scheme conducive for global discourse

Nature Microbiology(2021)10.1038/s41564-021-00932-w

N/A

0.863DataRank · unranked

315 citations

Mark D. Perkins, Jens H. Kuhn, Mark J. Pallen, Erik Alm, Brett N. Archer +42 more

Whole Genome Sequencing of SARS-CoV-2: Adapting Illumina Protocols for Quick and Accurate Outbreak Investigation during a Pandemic

Genes(2020)10.3390/genes11080949

N/A

0.686DataRank · unranked

96 citations

Jennifer Giandhari, Houriiyah Tegally, Eduan Wilkinson, Benjamin Chimukangara, Richard Lessells +12 more

An early warning system for emerging SARS-CoV-2 variants

Nature Medicine(2022)10.1038/s41591-022-01836-w

N/A

0.680DataRank · unranked

92 citations

Anne von Gottberg, Lipi Thukral, Nathalie Worp, Bas B. Oude Munnink, Surabhi Rathore +56 more

Omicron infection enhances Delta antibody immunity in vaccinated persons

Nature(2022)10.1038/s41586-022-04830-x

N/A

0.675DataRank · unranked

89 citations

Farina Karim, Sandile Cele, Kajal Reedoy, James Emmanuel San, Gila Lustig +52 more

Sampling bias and incorrect rooting make phylogenetic network tracing of SARS-COV-2 infections unreliable

Proceedings of the National Academy of Sciences(2020)10.1073/pnas.2007295117

N/A

0.665DataRank · unranked

83 citations

Sergei L. Kosakovsky Pond, Simone Marini, Brittany Rife Magalis, Anne–Mieke Vandamme, Simon Dellicour +31 more

Early transmission of SARS-CoV-2 in South Africa: An epidemiological and phylogenetic report

medRxiv(2020)10.1101/2020.05.29.20116376

N/A

0.581DataRank · unranked

47 citations

Sureshnee Pillay, Eduan Wilkinson, Houriiyah Tegally, Ilya Sinayskiy, Maria Schuld +14 more

Addressing pandemic-wide systematic errors in the SARS-CoV-2 phylogeny

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.04.29.591666

Top 34%

0.575DataRank

Top 34%17 citations

Angie S. Hinrichs, D.P. Anderson, Lily Karim, Bethany L. Dearlove, Jeff Knaggs +95 more

SARS-CoV-2 infection in immunosuppression evolves sub-lineages which independently accumulate neutralization escape mutations

Virus Evolution(2023)10.1093/ve/vead075

N/A

0.544DataRank · unranked

13 citations

Yashica Ganga, Hylton Rodel, Houriiyah Tegally, Afrah Khairallah, Laurelle Jackson +15 more

The role of high-risk geographies in the perpetuation of the HIV epidemic in rural South Africa: A spatial molecular epidemiology study

PLOS Global Public Health(2022)10.1371/journal.pgph.0000105

N/A

0.482DataRank · unranked

10 citations

Túlio de Oliveira, Tiago Gräf, Dennis Maletich Junqueira, Eduan Wilkinson, Philippe Lemey +4 more

HIV specific CD8+ TRM-like cells in tonsils express exhaustive signatures in the absence of natural HIV control

Frontiers in Immunology(2022)10.3389/fimmu.2022.912038

N/A

0.406DataRank · unranked

14 citations

Sarah K. Nyquist, Osaretin E. Asowata, Samuel W. Kazer, Alveera Singh, Abigail Ngoepe +21 more

Hypermethylation at the CXCR5 gene locus limits trafficking potential of CD8+ T cells into B-cell follicles during HIV-1 infection

Blood Advances(2022)10.1182/bloodadvances.2021006001

N/A

0.406DataRank · unranked

14 citations

Werner Smidt, Anneta Naidoo, Thandeka Nkosi, Thandekile Ngubane, Trevor Khaba +13 more

Shifts in global mobility dictate the synchrony of SARS-CoV-2 epidemic waves

Journal of Travel Medicine(2022)10.1093/jtm/taac134

N/A

0.406DataRank · unranked

14 citations

Kamran Khan, Carmen Huber, Túlio de Oliveira, Moritz U. G. Kraemer, Houriiyah Tegally

Hybrid versus vaccine immunity of mRNA-1273 among people living with HIV in East and Southern Africa: a prospective cohort analysis from the multicentre CoVPN 3008 (Ubuntu) study

EClinicalMedicine(2025)10.1016/j.eclinm.2024.103054

N/A

0.269DataRank · unranked

5 citations

Asa Tapley, Aaron Hudson, Sufia Dadabhai, Bo Zhang, Nyaradzo Mgodi +93 more

Identifying genomic surveillance gaps in Africa for the global public health response to West Nile virus: a systematic review

The Lancet Microbe(2025)10.1016/j.lanmic.2025.101176

N/A

0.241DataRank · unranked

4 citations

Nikita Sitharam, L. Marije Hofstra, Graeme Dor, Gaspary Mwanyika, Martina L. Reichmuth +60 more

Genomic diversity and surveillance of SARS-CoV-2 in Nigeria

BMC Genomics(2025)10.1186/s12864-025-12058-y

Top 78%

0.104DataRank

Top 78%1 citations

Ezenwa James Onyemata, Natalia Blanco, Chika Onwuamah, Nnaemeka Ndodo, Paul E. Oluniyi +36 more

SARS-CoV-2 evolved during advanced HIV disease immunosuppression has Beta-like escape of vaccine and Delta infection elicited immunity

medRxiv(2021)10.1101/2021.09.14.21263564

N/A

0DataRank · unranked

23 citations

Farina Karim, Gila Lustig, James Emmanuel San, Tandile Hermanus, Houriiyah Tegally +24 more

Loss of recognition of SARS-CoV-2 B.1.351 variant spike epitopes but overall preservation of T cell immunity

medRxiv(2021)10.1101/2021.06.03.21258307

N/A

0DataRank · unranked

10 citations

Roanne Keeton, Thandeka Moyo-Gwete, Tandile Hermanus, Prudence Kgagudi, Richard Baguma +21 more

Genomic epidemiology reveals the impact of national and international restrictions measures on the SARS-CoV-2 epidemic in Brazil

medRxiv(2021)10.1101/2021.10.07.21264644

N/A

0DataRank · unranked

5 citations

Svetoslav Nanev Slavov, Vagner Fonseca, Eduan Wilkinson, Houriiyah Tegally, José Salvatore Leister Patané +95 more

HIV-specific CD8 + T-cells in tonsils express exhaustive T RM -like signatures

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.04.467061

N/A

0DataRank · unranked

0 citations

Sarah K. Nyquist, Osaretin E. Asowata, Samuel W. Kazer, Alveera Singh, Abigail Ngoepe +21 more

Rapid epidemic expansion of the SARS-CoV-2 Omicron variant in southern Africa

Nature(2022)10.1038/s41586-022-04411-y

N/A

0DataRank · unranked

1910 citations

Sikhulile Moyo, Daniel G. Amoako, Houriiyah Tegally, Cathrine Scheepers, Christian L. Althaus +94 more

SARS-CoV-2 prolonged infection during advanced HIV disease evolves extensive immune escape

Cell Host & Microbe(2022)10.1016/j.chom.2022.01.005

N/A

0DataRank · unranked

241 citations

Farina Karim, Gila Lustig, James Emmanuel San, Tandile Hermanus, Houriiyah Tegally +23 more

Omicron BA.4/BA.5 escape neutralizing immunity elicited by BA.1 infection

Nature Communications(2022)10.1038/s41467-022-32396-9

N/A

0DataRank · unranked

187 citations

Farina Karim, Yashica Ganga, Mallory Bernstein, Zesuliwe Jule, Kajal Reedoy +30 more

Escape from recognition of SARS-CoV-2 variant spike epitopes but overall preservation of T cell immunity

Science Translational Medicine(2022)10.1126/scitranslmed.abj6824

N/A

0DataRank · unranked

126 citations

Roanne Keeton, Thandeka Moyo-Gwete, Tandile Hermanus, Prudence Kgagudi, Richard Baguma +23 more

Selection Analysis Identifies Clusters of Unusual Mutational Changes in Omicron Lineage BA.1 That Likely Impact Spike Function

Molecular Biology and Evolution(2022)10.1093/molbev/msac061

N/A

0DataRank · unranked

123 citations

Spyros Lytras, Alexander G. Lucaci, Wolfgang Maier, Björn Grüning, Stephen D. Shank +33 more

Genomic epidemiology of the SARS-CoV-2 epidemic in Brazil

Nature Microbiology(2022)10.1038/s41564-022-01191-z

N/A

0DataRank · unranked

111 citations

Svetoslav Nanev Slavov, Vagner Fonseca, Eduan Wilkinson, Houriiyah Tegally, José Salvatore Leister Patané +95 more

Rapid epidemic expansion of the SARS-CoV-2 Omicron variant in southern Africa

Nature(2022)10.1038/d41586-021-03832-5

N/A

0DataRank · unranked

73 citations

Sikhulile Moyo, Daniel G. Amoako, Houriiyah Tegally, Cathrine Scheepers, Christian L. Althaus +94 more

Emergence and phenotypic characterization of the global SARS-CoV-2 C.1.2 lineage

Nature Communications(2022)10.1038/s41467-022-29579-9

N/A

0DataRank · unranked

38 citations

Josie Everatt, Daniel G. Amoako, Houriiyah Tegally, Constantinos Kurt Wibmer, Anele Mnguni +40 more

Ethics and governance challenges related to genomic data sharing in southern Africa: the case of SARS-CoV-2

The Lancet Global Health(2022)10.1016/s2214-109x(22)00417-x

N/A

0DataRank · unranked

35 citations

Nezerith Cengiz, Aneeka Domingo, Gonasagrie Nair, Adetayo Emmanuel Obasa, Richard Lessells +2 more

Advancing detection and response capacities for emerging and re-emerging pathogens in Africa

The Lancet Infectious Diseases(2022)10.1016/s1473-3099(22)00723-x

N/A

0DataRank · unranked

33 citations

Sabin Nsanzimana, Angeli Rawat, Lindsay A. Wilson, Philip Rosenthal, Mark J. Siedner +13 more

The geography and inter-community configuration of new sexual partnership formation in a rural South African population over fourteen years (2003–2016)

PLOS Global Public Health(2022)10.1371/journal.pgph.0000055

N/A

0DataRank · unranked

1 citations

Diego F. Cuadros, Eduan Wilkinson, Dennis Maletich Junqueira, Túlio de Oliveira, Frank Tanser +1 more

Omicron sub-lineages BA.4/BA.5 escape BA.1 infection elicited neutralizing immunity

medRxiv(2022)10.1101/2022.04.29.22274477

N/A

0DataRank · unranked

86 citations

Farina Karim, Yashica Ganga, Mallory Bernstein, Zesuliwe Jule, Kajal Reedoy +27 more

SARS-CoV-2 evolves increased infection elicited cell death and fusion in an immunosuppressed individual

medRxiv(2022)10.1101/2022.11.23.22282673

N/A

0DataRank · unranked

7 citations

Yashica Ganga, Hylton Rodel, Houriiyah Tegally, Laurelle Jackson, Sandile Cele +12 more

Dispersal patterns and influence of air travel during the global expansion of SARS-CoV-2 variants of concern

Cell(2023)10.1016/j.cell.2023.06.001

N/A

0DataRank · unranked

72 citations

Eduan Wilkinson, Joseph L.-H. Tsui, Monika Moir, Darren Martin, Anderson F. Brito +16 more

Rapid Epidemic Expansion of Chikungunya Virus East/Central/South African Lineage, Paraguay

Emerging infectious diseases(2023)10.3201/eid2909.230523

N/A

0DataRank · unranked

45 citations

Cynthia Vázquez, Maurício Lima, Emerson Castro, Analia Rojas, Andrea Gómez de la Fuente +35 more

Genomic epidemiology unveils the dynamics and spatial corridor behind the Yellow Fever virus outbreak in Southern Brazil

Science Advances(2023)10.1126/sciadv.adg9204

N/A

0DataRank · unranked

40 citations

Francesco Pinotti, Camila Zanluca, Vagner Fonseca, Taishi Nakase, Andrea Cristine Koishi +89 more

Evaluation of miniaturized Illumina DNA preparation protocols for SARS-CoV-2 whole genome sequencing

PLoS ONE(2023)10.1371/journal.pone.0283219

N/A

0DataRank · unranked

10 citations

James Emmanuel San, Derek Tshiabuila, Yeshnee Naidoo, Yusasha Pillay, Akhil Maharaj +8 more

Managing and assembling population-scale data streams, tools and workflows to plan for future pandemics within the INFORM-Africa Consortium

South African Journal of Science(2023)10.17159/sajs.2023/14659

N/A

0DataRank · unranked

4 citations

Joicymara S. Xavier, Marcel Dunaiski, Houriiyah Tegally, Sunday O. Oladejo, Olawole Ayorinde +4 more

An emerging clade of Chikungunya West African genotype discovered in real-time during 2023 outbreak in Senegal

medRxiv(2023)10.1101/2023.11.14.23298527

N/A

0DataRank · unranked

16 citations

Houriiyah Tegally, Yajna Ramphal, Ndiaye Seyni, Marièma Sarr, M.M. Diop +40 more

Rapid epidemic expansion of chikungunya virus-ECSA lineage in Paraguay

medRxiv(2023)10.1101/2023.04.16.23288635

N/A

0DataRank · unranked

7 citations

Cynthia Vázquez, Maurício Lima, Emerson Castro, Analia Rojas, Andrea Gómez de la Fuente +35 more

Comparing SARS-CoV-2 sequencing methodologies during early phase detection of the Delta variant in South Africa

Research Square(2023)10.21203/rs.3.rs-2310293/v1

N/A

0DataRank · unranked

0 citations

Derek Tshiabuila, Yajna Ramphal, Jennifer Giandhari, Carel J. van Heerden, Cheryl Baxter +9 more

Using nearly full-genome HIV sequence data improves phylogeny reconstruction in a simulated epidemic

UNC Libraries(2023)10.17615/qgaw-2t47

Top 100%

0DataRank

Top 100%0 citations

Pontiano Kaleebu, Tom Quinn, Deogratius Ssemwanga, Paul Kellam, A.J. Leigh Brown +29 more

Sustained human outbreak of a new MPXV clade I lineage in eastern Democratic Republic of the Congo

Nature Medicine(2024)10.1038/s41591-024-03130-3

N/A

0DataRank · unranked

361 citations

Cris Kacita, Eddy Kinganda-Lusamaki, Áine O’Toole, Tony Wawina-Bokalanga, Daniel Mukadi‐Bamuleka +40 more

A new lineage nomenclature to aid genomic surveillance of dengue virus

PLoS Biology(2024)10.1371/journal.pbio.3002834

N/A

0DataRank · unranked

71 citations

Sara Cleemput, James Siqueira Pereira, Robert J. Gifford, Vagner Fonseca, Houriiyah Tegally +36 more

An updated framework for SARS-CoV-2 variants reflects the unpredictability of viral evolution

Nature Medicine(2024)10.1038/s41591-024-02949-0

N/A

0DataRank · unranked

27 citations

James R. Otieno, Nathalie Worp, Homa Attar Cohen, Bas B. Oude Munnink, Laith J. Abu‐Raddad +53 more

Dengue virus importation risks in Africa: a modelling study

The Lancet Planetary Health(2024)10.1016/s2542-5196(24)00272-9

N/A

0DataRank · unranked

23 citations

José Lourenço, Joseph L.-H. Tsui, Vittoria Colizza, Yajna Ramphal, Cheryl Baxter +5 more

Dynamics and ecology of a multi-stage expansion of Oropouche virus in Brazil

medRxiv(2024)10.1101/2024.10.29.24316328

N/A

0DataRank · unranked

15 citations

Simon Dellicour, Jenicca Poongavanan, Carla Mavian, Graeme Dor, Vagner Fonseca +15 more

A new lineage nomenclature to aid genomic surveillance of dengue virus

medRxiv(2024)10.1101/2024.05.16.24307504

N/A

0DataRank · unranked

10 citations

Sara Cleemput, Vagner Fonseca, Houriiyah Tegally, Anderson F. Brito, Robert J. Gifford +30 more

Reflective Evaluation of Next-Generation Sequencing Data during Early Phase Detection of the Delta Variant

OBM Genetics(2024)10.21926/obm.genet.2402239

Top 100%

0DataRank

Top 100%0 citations

Derek Tshiabuila, Yajna Ramphal, Jennifer Giandhari, Carel J. van Heerden, Cheryl Baxter +7 more

A phylogenetic assessment of HIV-1 transmission trends among people who inject drugs from Coastal and Nairobi, Kenya

Virus Evolution(2024)10.1093/ve/veae092

N/A

0DataRank · unranked

0 citations

George M. Nduva, Bhavna Chohan, Loice Mbogo, Aliza Monroe‐Wise, Betsy Sambai +11 more

Travel-associated international spread of Oropouche virus beyond the Amazon

Journal of Travel Medicine(2025)10.1093/jtm/taaf018

N/A

0DataRank · unranked

20 citations

Felicidade Mota Pereira, Elaine Cristina de Oliveira, Janete Taynã Nascimento Rodrigues, Mariza Hoffmann Machado, Vagner Fonseca +53 more

Importance of outbreak response research in bridging knowledge gaps on emerging infectious diseases

BMJ Global Health(2025)10.1136/bmjgh-2024-018297

N/A

0DataRank · unranked

4 citations

Eric Osoro, Richard Reithinger, David Wang, Michael Diamond, Wesley C. Van Voorhis +20 more

Emergence of the BA.2.87.1 lineage of SARS-CoV-2 in South Africa, a highly diverged BA.2-related lineage

Virus Evolution(2025)10.1093/ve/veaf083

N/A

0DataRank · unranked

2 citations

Buhle Ntozini, Ryan Hisner, Mukhlid Yousif, Phindile Ntuli, Nkosenhle Ndlovu +18 more

Identification and genomic characterisation of BA.3.2: a highly divergent BA.3-related SARS-CoV-2 lineage from southern Africa

medRxiv(2025)10.64898/2025.12.19.25342658

N/A

0DataRank · unranked

4 citations

Dikeledi Kekana, Ryan Hisner, Darren P. Martin, Bette Korber, Timo Ernst +16 more

Hybrid versus vaccine immunity of mRNA-1273 among people living with HIV in East and Southern Africa: a prospective cohort analysis from the multicentre CoVPN 3008 (Ubuntu) study

UNC Libraries(2025)10.17615/p4hj-9n46

N/A

0DataRank · unranked

0 citations

Jia Jin Kee, Mubiana Inambao, Essack Mitha, Dishiki Kalonji, William Brumskine +76 more

Determinants of Vaginal Microbiota Composition

Frontiers in Cellular and Infection Microbiology(2020)10.3389/fcimb.2020.00467

N/A

0DataRank · unranked

104 citations

Douglas S. Kwon, Túlio de Oliveira, Emily Wong, Yumna Moosa

Enhancing SARS-CoV-2 response capacity in Africa and other centers for research in emerging infectious diseases centres through a collaborative training programme

Clinical Microbiology and Infection(2025)10.1016/j.cmi.2025.10.002

N/A

0DataRank · unranked

0 citations

Abdou Padane, Alioune Gaye, Anavaj Sakuntabha, Awa B. Dème, Badara Cissé +23 more

Protocol: Leveraging a demographic and health surveillance system for Covid-19 Surveillance in rural KwaZulu-Natal

Wellcome Open Research(2020)10.12688/wellcomeopenres.15949.1

N/A

0DataRank · unranked

20 citations

Guy Harling, Anne Derache, Theresa Smit, Thandeka Khoza, Resign Gunda +18 more

Protocol: Leveraging a demographic and health surveillance system for Covid-19 Surveillance in rural KwaZulu-Natal

Wellcome Open Research(2020)10.12688/wellcomeopenres.15949.2

N/A

0DataRank · unranked

17 citations

Guy Harling, Anne Derache, Theresa Smit, Thandeka Khoza, Resign Gunda +18 more

Pervasive and non-random recombination in near full-length HIV genomes from Uganda

Virus Evolution(2020)10.1093/ve/veaa004

N/A

0DataRank · unranked

26 citations

Emma B. Hodcroft, Deogratius Ssemwanga, John M. Kitayimbwa, Gonzalo Yebra, Luis Roger Esquivel Gomez +17 more

Phylogenetic Studies of Transmission Dynamics in Generalized HIV Epidemics: An Essential Tool Where the Burden is Greatest?

UCL Discovery (University College London)(2020)10.17615/757h-rh72

N/A

0DataRank · unranked

4 citations

Ann M. Dennis, Christophe Fraser, Myron S. Cohen, Joshua T. Herbeck, Paul Kellam +3 more

Genome Detective Coronavirus Typing Tool for rapid identification and characterization of novel coronavirus genomes

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.01.31.928796

N/A

0DataRank · unranked

39 citations

Wim Dumon, Vagner Fonseca, Wasim Abdool Karim, Marta Giovanetti, Luiz Carlos Alcantara +3 more

High Resolution analysis of Transmission Dynamics of Sars-Cov-2 in Two Major Hospital Outbreaks in South Africa Leveraging Intrahost Diversity

medRxiv(2020)10.1101/2020.11.15.20231993

N/A

0DataRank · unranked

20 citations

Sinaye Ngcapu, Aquillah M. Kanzi, Houriiyah Tegally, Vagner Fonseca, Jennifer Giandhari +10 more

Portable sequencing in the field and the classroom: a retrospective examination of the circulation of DENV1 and DENV2 in Brazil

medRxiv(2020)10.1101/2020.09.01.20183301

N/A

0DataRank · unranked

1 citations

Marta Giovanetti, Vagner Fonseca, Joilson Xavier, Álvaro Salgado, Valdinete Alves do Nascimento +55 more

HIV cell-to-cell spread slows evolution of drug resistance

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.04.283192

N/A

0DataRank · unranked

0 citations

Sandile Cele, Laurelle Jackson, Jennifer Giandhari, Túlio de Oliveira, Gila Lustig +2 more

Omicron extensively but incompletely escapes Pfizer BNT162b2 neutralization

Nature(2021)10.1038/s41586-021-04387-1

N/A

0DataRank · unranked

1193 citations

Laurelle Jackson, David S. Khoury, Khadija Khan, Thandeka Moyo-Gwete, Houriiyah Tegally +58 more

The emergence and ongoing convergent evolution of the SARS-CoV-2 N501Y lineages

Cell(2021)10.1016/j.cell.2021.09.003

N/A

0DataRank · unranked

276 citations

Steven Weaver, Houriiyah Tegally, James Emmanuel San, Stephen D. Shank, Eduan Wilkinson +17 more

Omicron extensively but incompletely escapes Pfizer BNT162b2 neutralization

Nature(2021)10.1038/d41586-021-03824-5

N/A

0DataRank · unranked

188 citations

Laurelle Jackson, David S. Khoury, Khadija Khan, Thandeka Moyo-Gwete, Houriiyah Tegally +29 more

HIV-1 and SARS-CoV-2: Patterns in the evolution of two pandemic pathogens

Cell Host & Microbe(2021)10.1016/j.chom.2021.05.012

N/A

0DataRank · unranked

115 citations

Elena Giorgi, Srirupa Chakraborty, Kien Nguyen, Tanmoy Bhattacharya, James Theiler +51 more

West Nile Virus in Brazil

Pathogens(2021)10.3390/pathogens10070896

N/A

0DataRank · unranked

28 citations

Marta Giovanetti, Lilian Silva Catenacci, Vagner Fonseca, Flávia Figueira Aburjaile, Flávia Löwen Levy Chalhoub +26 more

Short Report: Early genomic detection of SARS-CoV-2 P.1 variant in Northeast Brazil

PLoS neglected tropical diseases(2021)10.1371/journal.pntd.0009591

N/A

0DataRank · unranked

13 citations

Marta Giovanetti, Vanessa Brandão Nardy, Luciana Reboredo de Oliveira da Silva, Marcela Gómez, Jaqueline Gomes Lima +11 more

2021 update to HIV-TRePS: a highly flexible and accurate system for the prediction of treatment response from incomplete baseline information in different healthcare settings

Journal of Antimicrobial Chemotherapy(2021)10.1093/jac/dkab078

N/A

0DataRank · unranked

4 citations

Dechao Wang, Maria-Jesus Perez-Elias, Robin Wood, Dolphina Cogill, Hugo Tempelman +64 more

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