Yuval Kluger

Also affiliated with Yale New Haven Health System, Applied Mathematics (United States)

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Graph of graphs analysis for multiplexed data with application to imaging mass cytometry

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.23.263467

Top 100%

0DataRank

Top 100%0 citations

Tal Shnitzer, Ronen Talmon, Franz Villarroel‐Espíndola, Shruti Desai, Kurt A. Schalper +2 more

Papers

Driven by 53 papers — median percentile 0. Top paper: “Pembrolizumab for management of patients with NSCLC and brain metastases: long-term results and biomarker analysis from a non-randomised, open-label, phase 2 trial”.

Pembrolizumab for management of patients with NSCLC and brain metastases: long-term results and biomarker analysis from a non-randomised, open-label, phase 2 trial

The Lancet Oncology(2020)10.1016/s1470-2045(20)30111-x

N/A

6.6DataRank · unranked

541 citations

Kurt A. Schalper, Scott Gettinger, Amit Mahajan, Roy S. Herbst, Anne C. Chiang +19 more

A bedside to bench study of anti-PD-1, anti-CD40, and anti-CSF1R indicates that more is not necessarily better

Molecular Cancer(2023)10.1186/s12943-023-01884-x

N/A

0.635DataRank · unranked

14 citations

Sarah A. Weiss, Irina Krykbaeva, Rihao Qu, Ioannis Vathiotis, Myrto Moutafi +18 more

HIV-1–infected T cell clones are shared across cerebrospinal fluid and blood during ART

JCI Insight(2024)10.1172/jci.insight.176208

N/A

0.591DataRank · unranked

19 citations

Jennifer Yoon, Hailey Reisert, Bibhuprasad Das, Benjamin Orlinick, Jennifer Chiarella +11 more

Autologous humanized PDX modeling for immuno-oncology recapitulates features of the human tumor microenvironment

Journal for ImmunoTherapy of Cancer(2023)10.1136/jitc-2023-006921

N/A

0.553DataRank · unranked

39 citations

Jan Martínek, Bradley A. Krasnick, Yunjiang Zheng, Keenan J. Robbins, Rihao Qu +29 more

The single-cell opioid responses in the context of HIV (SCORCH) consortium

Molecular Psychiatry(2024)10.1038/s41380-024-02620-7

N/A

0.526DataRank · unranked

16 citations

Rianne R. Campbell, Mary Kay Lobo, Joseph P. Receveur, Kriti Agrawal, Alejandra Borjabad +81 more

Circulating tumor-reactive KIR+CD8+ T cells suppress anti-tumor immunity in patients with melanoma

Nature Immunology(2024)10.1038/s41590-024-02023-4

N/A

0.461DataRank · unranked

10 citations

Liliana E. Lucca, Wesley Lewis, Jiping Wang, Catarina V. Nogueira, Sebastian Heer +22 more

SIMVI reveals intrinsic and spatial-induced states in spatial omics data

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.28.554970

N/A

0.292DataRank · unranked

5 citations

David Su, Harriet M. Kluger, Rong Fan, Yuval Kluger, Mingze Dong

Scaling deep identifiable models enables zero-shot characterization of single-cell biological states

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.11.566161

N/A

0.226DataRank · unranked

3 citations

Kriti Agrawal, Rong Fan, Esen Sefik, Richard A. Flavell, Yuval Kluger +1 more

Graph of graphs analysis for multiplexed data with application to imaging mass cytometry

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.23.263467

Top 100%

0DataRank

Top 100%0 citations

Tal Shnitzer, Ronen Talmon, Franz Villarroel‐Espíndola, Shruti Desai, Kurt A. Schalper +2 more

Detection of differentially abundant cell subpopulations in scRNA-seq data

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2100293118

N/A

0DataRank · unranked

168 citations

Ariel Jaffe, Henry Li, Ofir Lindenbaum, Esen Sefik, Ruaidhrí Jackson +4 more

Graph of graphs analysis for multiplexed data with application to imaging mass cytometry

PLoS Computational Biology(2021)10.1371/journal.pcbi.1008741

N/A

0DataRank · unranked

10 citations

Tal Shnitzer, Ronen Talmon, Franz Villarroel‐Espíndola, Shruti Desai, Kurt A. Schalper +2 more

Doubly Stochastic Normalization of the Gaussian Kernel Is Robust to Heteroskedastic Noise

SIAM Journal on Mathematics of Data Science(2021)10.1137/20m1342124

N/A

0DataRank · unranked

2 citations

Ronald R. Coifman, Yuval Kluger, Boris Landa

Spectral Neighbor Joining for Reconstruction of Latent Tree Models

SIAM Journal on Mathematics of Data Science(2021)10.1137/20m1365715

N/A

0DataRank · unranked

1 citations

Noah Amsel, Yariv Aizenbud, Boaz Nadler, Joseph T. Chang, Yuval Kluger +1 more

Connectome : computation and visualization of cell-cell signaling topologies in single-cell systems data

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.21.427529

N/A

0DataRank · unranked

26 citations

Junchen Yang, James Garritano, Meng Wang, Dan Kushnir, Jonas C. Schupp +8 more

On the Efficient Evaluation of the Azimuthal Fourier Components of the Green's Function for Helmholtz's Equation in Cylindrical Coordinates

arXiv (Cornell University)(2021)10.48550/arxiv.2104.12241

N/A

0DataRank · unranked

0 citations

Yuval Kluger, Vladimir Rokhlin, Kirill Serkh, James Garritano

Zero-preserving imputation of single-cell RNA-seq data

Nature Communications(2022)10.1038/s41467-021-27729-z

N/A

0DataRank · unranked

289 citations

Jun Zhao, Manolis Roulis, Piotr Bielecki, Richard A. Flavell, Boaz Nadler +2 more

Computation and visualization of cell–cell signaling topologies in single-cell systems data using Connectome

Scientific Reports(2022)10.1038/s41598-022-07959-x

N/A

0DataRank · unranked

140 citations

Junchen Yang, James Garritano, Meng Wang, Dan Kushnir, Jonas C. Schupp +8 more

Comprehensive visualization of cell–cell interactions in single-cell and spatial transcriptomics with NICHES

Bioinformatics(2022)10.1093/bioinformatics/btac775

N/A

0DataRank · unranked

123 citations

Junchen Yang, Neeharika Kothapalli, Wesley Lewis, Naftali Kaminski, Laura E. Niklason +2 more

Mitochondrial Stress Induces an HRI-eIF2α Pathway Protective for Cardiomyopathy

Circulation(2022)10.1161/circulationaha.122.059594

N/A

0DataRank · unranked

33 citations

Anh Nguyen, Jing Pang, Jun Zhao, Ze’e Chen, Zhengyu Liang +9 more

Decomposing a deterministic path to mesenchymal niche formation by two intersecting morphogen gradients

Developmental Cell(2022)10.1016/j.devcel.2022.03.011

N/A

0DataRank · unranked

39 citations

K. Gupta, Danni Dong, Yiqun Jiang, Boris Landa, Charles Saez +7 more

Biwhitening Reveals the Rank of a Count Matrix

SIAM Journal on Mathematics of Data Science(2022)10.1137/21m1456807

N/A

0DataRank · unranked

19 citations

Thomas T. C. K. Zhang, Yuval Kluger, Boris Landa

Coupled fibromodulin and SOX2 signaling as a critical regulator of metastatic outgrowth in melanoma

Cellular and Molecular Life Sciences(2022)10.1007/s00018-022-04364-5

N/A

0DataRank · unranked

13 citations

Hongyi Zhang, Christopher R. Zito, Chetan K. Rane, Xianyong Ma, Olivia K. Provance +8 more

Inhibition of renalase drives tumour rejection by promoting T cell activation

European Journal of Cancer(2022)10.1016/j.ejca.2022.01.002

N/A

0DataRank · unranked

12 citations

Shlomit Jessel, Rihao Qu, Yuval Kluger, Tian-Min Chen, Lindsay Hollander +10 more

Longitudinal single-cell analysis of a patient receiving adoptive cell therapy reveals potential mechanisms of treatment failure

Molecular Cancer(2022)10.1186/s12943-022-01688-5

N/A

0DataRank · unranked

8 citations

Yuval Kluger, Junchen Yang, Jun Zhao, David A. Hafler, Diane S. Krause +6 more

On the efficient evaluation of the azimuthal Fourier components of the Green's function for Helmholtz's equation in cylindrical coordinates

Journal of Computational Physics(2022)10.1016/j.jcp.2022.111585

N/A

0DataRank · unranked

4 citations

Yuval Kluger, Vladimir Rokhlin, Kirill Serkh, James Garritano

Comprehensive visualization of cell-cell interactions in single-cell and spatial transcriptomics with NICHES

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.23.477401

N/A

0DataRank · unranked

19 citations

Junchen Yang, Neeharika Kothapalli, Wesley Lewis, Naftali Kaminski, Laura E. Niklason +2 more

Gene Trajectory Inference for Single-cell Data by Optimal Transport Metrics

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.07.08.499404

N/A

0DataRank · unranked

3 citations

Xiuyuan Cheng, Esen Sefik, Jay S. Stanley, Boris Landa, Francesco Strino +8 more

Coupled fibromodulin and SOX2 signaling as a critical regulator of distant metastasis initiation in melanoma

Research Square(2022)10.21203/rs.3.rs-1244262/v1

N/A

0DataRank · unranked

0 citations

Hongyi Zhang, Christopher R. Zito, Chetan K. Rane, Xianyong Ma, Thuy Tran +7 more

Age of the bone marrow dictates clonality of smooth muscle-derived cells in the atherosclerotic plaque

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.18.476756

N/A

0DataRank · unranked

0 citations

Xinbo Zhang, Jui M. Dave, Raja Chakraborty, Rihao Qu, Rachana R. Chandran +11 more

Spatial epigenome–transcriptome co-profiling of mammalian tissues

Nature(2023)10.1038/s41586-023-05795-1

N/A

0DataRank · unranked

440 citations

Yanxiang Deng, Petra Kukanja, Eneritz Agirre, Marek Bartošovič, Mingze Dong +18 more

The age of bone marrow dictates the clonality of smooth muscle-derived cells in atherosclerotic plaques

Nature Aging(2023)10.1038/s43587-022-00342-5

N/A

0DataRank · unranked

30 citations

Xinbo Zhang, Jui M. Dave, Raja Chakraborty, Rihao Qu, Rachana R. Chandran +11 more

IL-6 trans-signaling in a humanized mouse model of scleroderma

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2306965120

N/A

0DataRank · unranked

16 citations

Kriti Agrawal, Esen Sefik, A.V. Odell, Elizabeth Caves, Nancy C. Kirkiles-Smith +6 more

Maternal CXCR4 deletion results in placental defects and pregnancy loss mediated by immune dysregulation

JCI Insight(2023)10.1172/jci.insight.172216

N/A

0DataRank · unranked

13 citations

Chase Burzynski, Yuan Fang, Aya Tal, Alice Y. Chen, Jacqueline Kisa +5 more

The Dyson Equalizer: Adaptive Noise Stabilization for Low-Rank Signal Detection and Recovery

arXiv (Cornell University)(2023)10.48550/arxiv.2306.11263

N/A

0DataRank · unranked

1 citations

Yuval Kluger, Boris Landa

Spectral top-down recovery of latent tree models

Information and Inference A Journal of the IMA(2023)10.1093/imaiai/iaad032

N/A

0DataRank · unranked

0 citations

Ariel Jaffe, Meng Wang, Amber Hu, Noah Amsel, Boaz Nadler +3 more

Data from Genomic Heterogeneity and the Small Renal Mass

(2023)10.1158/1078-0432.c.6527436.v1

N/A

0DataRank · unranked

0 citations

Zuoquan Xie, Marta Boeke, Jamil Syed, Kevin Nguyen, Patrick D. McGillivray +8 more

Data from Expression of Aurora A (but Not Aurora B) Is Predictive of Survival in Breast Cancer

(2023)10.1158/1078-0432.c.6517146

N/A

0DataRank · unranked

0 citations

Robert L. Camp, Candice Schwartz, David L. Rimm, Harriet M. Kluger, Yuval Kluger +1 more

IL-10 constrains sphingolipid metabolism to limit inflammation

Nature(2024)10.1038/s41586-024-07098-5

N/A

0DataRank · unranked

227 citations

Mathias Skadow, Joonseok Oh, Rihao Qu, Quan Zhou, Wei-Yuan Hsieh +10 more

Gene trajectory inference for single-cell data by optimal transport metrics

Nature Biotechnology(2024)10.1038/s41587-024-02186-3

N/A

0DataRank · unranked

44 citations

Xiuyuan Cheng, Esen Sefik, Jay S. Stanley, Boris Landa, Francesco Strino +8 more

Circulating Tumor Reactive KIR+CD8+ T cells Suppress Anti-Tumor Immunity in Patients with Melanoma

Research Square(2024)10.21203/rs.3.rs-3956671/v1

N/A

0DataRank · unranked

0 citations

Benjamin Y. Lu, Liliana E. Lucca, Wesley Lewis, Jiping Wang, Catarina Nogeuira +20 more

Entropic Optimal Transport Eigenmaps for Nonlinear Alignment and Joint Embedding of High-Dimensional Datasets

arXiv (Cornell University)(2024)10.48550/arxiv.2407.01718

N/A

0DataRank · unranked

0 citations

Yuval Kluger, Rong Ma, Boris Landa

CTLA-4 blockade shifts the B cell repertoire toward autoimmunity

Journal of Clinical Investigation(2025)10.1172/jci189074

N/A

0DataRank · unranked

4 citations

Meng Wang, Yile Dai, Adrien Mirouse, Clarence Rachel Villanueva-Pachas, Delphine Bouis +14 more

The Dyson equalizer: adaptive noise stabilization for low-rank signal detection and recovery

Information and Inference A Journal of the IMA(2025)10.1093/imaiai/iaae036

N/A

0DataRank · unranked

1 citations

Yuval Kluger, Boris Landa

Cluster-independent multiscale marker identification in single-cell RNA-seq data using localized marker detector (LMD)

Communications Biology(2025)10.1038/s42003-025-08485-y

N/A

0DataRank · unranked

1 citations

Rihao Qu, Fabio Parisi, Francesco Strino, Hainan Lam, Jay S. Stanley +4 more

Hormetic elevation of taurine restrains inflammaging by deactivating the NLRP3 inflammasome

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.05.27.656381

N/A

0DataRank · unranked

3 citations

Seungjin Ryu, Mingze Dong, Yun‐Hee Youm, Subhasis Mohanty, Rae Maeda +13 more

Medications for opioid use disorder shape immune responses during chronic HIV infection

Cell Reports Medicine(2025)10.1016/j.xcrm.2025.102159

N/A

0DataRank · unranked

0 citations

Savannah F. Steinhauser, Timothy C. Davenport, Daniel Chieh-Ding Lin, Amare Eshetu, Samana Zeidi +6 more

Enteric Nervous System-Derived IL-18 Orchestrates Mucosal Barrier Immunity

Cell(2020)10.1016/j.cell.2019.12.016

N/A

0DataRank · unranked

202 citations

Ruaidhrí Jackson, Coco Duizer, Marc E. Healy, Jun Zhao, Joseph M. Rone +21 more

Multi-Omics Investigation of Innate Navitoclax Resistance in Triple-Negative Breast Cancer Cells

Cancers(2020)10.3390/cancers12092551

N/A

0DataRank · unranked

20 citations

Gauri A. Patwardhan, Jun Zhao, Rihao Qu, Xiaotong Li, Vikram B. Wali +8 more

Impact of healthcare worker shift scheduling on workforce preservation during the COVID-19 pandemic

Infection Control and Hospital Epidemiology(2020)10.1017/ice.2020.337

N/A

0DataRank · unranked

43 citations

Yariv Aizenbud, Ariel Jaffe, Fabio Parisi, Lilach Aizenbud, Eyal Minsky-Fenick +5 more

Alignment free identification of clones in B cell receptor repertoires

Nucleic Acids Research(2020)10.1093/nar/gkaa1160

N/A

0DataRank · unranked

30 citations

Nima Nouri, Yuval Kluger, Steven H. Kleinstein, Ofir Lindenbaum

Heavy-Tailed Kernels Reveal a Finer Cluster Structure in t-SNE Visualisations

Lecture notes in computer science(2020)10.1007/978-3-030-46150-8_8

N/A

0DataRank · unranked

13 citations

George Linderman, Stefan Steinerberger, Yuval Kluger, Philipp Berens, Dmitry Kobak

Alignment free identification of clones in B cell receptor repertoires

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.30.017384

N/A

0DataRank · unranked

7 citations

Nima Nouri, Yuval Kluger, Steven H. Kleinstein, Ofir Lindenbaum

The Spectral Underpinning of word2vec

Frontiers in Applied Mathematics and Statistics(2020)10.3389/fams.2020.593406

N/A

0DataRank · unranked

0 citations

Yuval Kluger, Ofir Lindenbaum, Jonathan Patsenker, Erez Peterfreund, Stefan Steinerberger +1 more

Yuval Kluger

Indexed papers

Top data-sharing exemplar

Papers