Aleksey Porollo

Cincinnati Children's Hospital Medical Center

Also affiliated with University of Cincinnati, University of Cincinnati Medical Center

MedicineBiochemistry, Genetics and Molecular BiologyComputer ScienceMaterials Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 17 papers. Top paper: “Pneumocystis murina promotes inflammasome formation and NETosis during Pneumocystis pneumonia”.

Pneumocystis murina promotes inflammasome formation and NETosis during Pneumocystis pneumonia

mBio(2024)10.1128/mbio.01409-24

N/A

0.450DataRank · unranked

12 citations

Alan Ashbaugh, Aleksey Porollo, George Smulian, Melanie T. Cushion, Steven G. Sayson

SEQ2MGS: an effective tool for generating realistic artificial metagenomes from the existing sequencing data

NAR Genomics and Bioinformatics(2022)10.1093/nargab/lqac050

N/A

0.359DataRank · unranked

8 citations

Aleksey Porollo, Pieter-Jan Van Camp

Metallothionein 3-Zinc Axis Suppresses Caspase-11 Inflammasome Activation and Impairs Antibacterial Immunity

Frontiers in Immunology(2021)10.3389/fimmu.2021.755961

N/A

0DataRank · unranked

14 citations

Jason C. Gardner, Abhijit Satpati, Suba Nookala, Santhosh Mukundan, Aleksey Porollo +3 more

CoeViz 2: Protein Graphs Derived From Amino Acid Covariance

Frontiers in Bioinformatics(2021)10.3389/fbinf.2021.653681

N/A

0DataRank · unranked

8 citations

Nicholas Maltbie, Shivchander Sudalairaj, Frazier N. Baker, Joseph Hirschfeld, Aleksey Porollo +1 more

The Effects of Sex and Strain on Pneumocystis murina Fungal Burdens in Mice

Journal of Fungi(2022)10.3390/jof8101101

N/A

0DataRank · unranked

1 citations

Alan Ashbaugh, Keeley Hendrix, Margaret S. Collins, Aleksey Porollo, Melanie T. Cushion +1 more

Survey of Protein Sequence Embedding Models

International Journal of Molecular Sciences(2023)10.3390/ijms24043775

N/A

0DataRank · unranked

31 citations

Siddharth Khadkikar, Aleksey Porollo, Chau Tran

MGS2AMR: a gene-centric mining of metagenomic sequencing data for pathogens and their antimicrobial resistance profile

Microbiome(2023)10.1186/s40168-023-01674-z

N/A

0DataRank · unranked

14 citations

V. B. Surya Prasath, David Haslam, Aleksey Porollo, Pieter-Jan Van Camp

Identification of a heterogeneous and dynamic ciliome during embryonic development and cell differentiation

Development(2023)10.1242/dev.201237

N/A

0DataRank · unranked

15 citations

Sai K. Balchand, Christian Louis Bonatto Paese, Ching‐Fang Chang, Yanfen Yang, Kari M. Brown +10 more

Anti-CELA1 antibody KF4 prevents emphysema by inhibiting stretch-mediated remodeling

JCI Insight(2024)10.1172/jci.insight.169189

N/A

0DataRank · unranked

6 citations

Noah J. Smith, Andrew J. Devine, Rashika Joshi, Emily Goodman, Qiang Fan +11 more

Insights into copper sensing and tolerance in Pneumocystis species

Frontiers in Microbiology(2024)10.3389/fmicb.2024.1383737

N/A

0DataRank · unranked

4 citations

Steven G. Sayson, Alan Ashbaugh, Sandra Rebholz, Julio A. Landero Figueroa, Melanie T. Cushion +1 more

Pneumocystis murina Promotes Inflammasome Formation and NETosis during Pneumocystis Pneumonia

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.16.580773

N/A

0DataRank · unranked

1 citations

Alan Ashbaugh, Aleksey Porollo, Melanie T. Cushion, Steven G. Sayson

Single-cell RNA sequencing defines developmental progression and reproductive transitions of Pneumocystis carinii

Microbiology Spectrum(2025)10.1128/spectrum.01277-25

N/A

0DataRank · unranked

2 citations

Steven G. Sayson, Alan Ashbaugh, Nicholas J. Wolf, Aleksey Porollo, George Smulian +2 more

Catalytic region mimetics in Na+/H+ exchanger regulatory factor 4 suppress guanylate cyclase 2C activity to regulate enterotoxin triggered diarrhea

Journal of Biological Chemistry(2025)10.1016/j.jbc.2025.110559

N/A

0DataRank · unranked

1 citations

Pramodha Liyanage, Yunjie Huang, Aleksey Porollo, Gerhard Hannig, Anjaparavanda P. Naren +2 more

Single-Cell RNA Sequencing Defines Developmental Progression and Reproductive Transitions of Pneumocystis carinii

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.21.649879

N/A

0DataRank · unranked

0 citations

Steven G. Sayson, Alan Ashbaugh, Aleksey Porollo, George Smulian, Melanie T. Cushion +1 more

Bioinformatics Approaches to the Understanding of Molecular Mechanisms in Antimicrobial Resistance

International Journal of Molecular Sciences(2020)10.3390/ijms21041363

N/A

0DataRank · unranked

67 citations

David Haslam, Aleksey Porollo, Pieter-Jan Van Camp

Case Report: Association of Ocular Colobomas With a Novel Missense Variant in CDC42, a Member of the Rho Family of Small GTPases

Clinical Genetics(2025)10.1111/cge.14768

N/A

0DataRank · unranked

0 citations

Nawaal Shinwari, Aleksey Porollo, Eniolami O. Dosunmu, Ehsan Ullah, Bin Guan +7 more

The Persistent Challenge of Pneumocystis Growth Outside the Mammalian Lung: Past and Future Approaches

Frontiers in Microbiology(2021)10.3389/fmicb.2021.681474

N/A

0DataRank · unranked

34 citations

Nikeya Tisdale-Macioce, Steven G. Sayson, Aleksey Porollo, Melanie T. Cushion